RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 CC2D1BQ5T0F9 858 aaKnown RBP9.35□□□□□ -0.91
SSR1-201ENST00000244763 NAP1L2Q9ULW6 460 aaPredicted RBP9.34□□□□□ -0.91
SSR1-201ENST00000244763 EIF3AQ14152 1382 aaKnown RBP9.34□□□□□ -0.91
SSR1-201ENST00000244763 SPAG9O60271 1321 aaKnown RBP9.34□□□□□ -0.91
SSR1-201ENST00000244763 IRX6P78412 446 aaPredicted RBP9.34□□□□□ -0.91
SSR1-201ENST00000244763 PTMSP20962 102 aa9.33□□□□□ -0.92
SSR1-201ENST00000244763 KIAA1211Q6ZU35 1233 aa9.33□□□□□ -0.92
SSR1-201ENST00000244763 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
SSR1-201ENST00000244763 SUPT16HQ9Y5B9 1047 aaKnown RBP9.32□□□□□ -0.92
SSR1-201ENST00000244763 CSB-PGBD3P0DP91 1061 aa9.32□□□□□ -0.92
SSR1-201ENST00000244763 CCDC34Q96HJ3 373 aa9.32□□□□□ -0.92
SSR1-201ENST00000244763 ANKRD30AQ9BXX3 1397 aa9.32□□□□□ -0.92
SSR1-201ENST00000244763 SOGA1O94964 1423 aa9.32□□□□□ -0.92
SSR1-201ENST00000244763 PAK3O75914 559 aaPredicted RBP9.32□□□□□ -0.92
SSR1-201ENST00000244763 HTATSF1O43719 755 aaKnown RBP9.32□□□□□ -0.92
SSR1-201ENST00000244763 HSCBQ8IWL3 235 aa9.32□□□□□ -0.92
SSR1-201ENST00000244763 TERF2IPQ9NYB0 399 aa9.31□□□□□ -0.92
SSR1-201ENST00000244763 KTN1Q86UP2 1357 aaKnown RBP9.3□□□□□ -0.92
SSR1-201ENST00000244763 SETD5Q9C0A6 1442 aa9.3□□□□□ -0.92
SSR1-201ENST00000244763 GPATCH3Q96I76 525 aa9.3□□□□□ -0.92
SSR1-201ENST00000244763 CHAF1AQ13111 956 aaPredicted RBP9.3□□□□□ -0.92
SSR1-201ENST00000244763 GNL2Q13823 731 aaKnown RBP9.3□□□□□ -0.92
SSR1-201ENST00000244763 LMOD3Q0VAK6 560 aa9.29□□□□□ -0.92
SSR1-201ENST00000244763 STK26Q9P289 416 aa9.29□□□□□ -0.92
SSR1-201ENST00000244763 CCER2I3L3R5 266 aa9.29□□□□□ -0.92
SSR1-201ENST00000244763 SOX12O15370 315 aa9.29□□□□□ -0.92
SSR1-201ENST00000244763 KIAA2012Q0VF49 1180 aa9.29□□□□□ -0.92
SSR1-201ENST00000244763 RALBP1Q15311 655 aa9.29□□□□□ -0.92
SSR1-201ENST00000244763 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
SSR1-201ENST00000244763 ISY1Q9ULR0 285 aaKnown RBP9.28□□□□□ -0.92
SSR1-201ENST00000244763 STK31Q9BXU1 1019 aa9.28□□□□□ -0.92
SSR1-201ENST00000244763 G3V3G9 751 aa9.28□□□□□ -0.92
SSR1-201ENST00000244763 DCAF8Q5TAQ9 597 aa9.28□□□□□ -0.92
SSR1-201ENST00000244763 TAF7LQ5H9L4 462 aa9.28□□□□□ -0.92
SSR1-201ENST00000244763 ABCC8Q09428 1581 aa9.27□□□□□ -0.93
SSR1-201ENST00000244763 PKD2Q13563 968 aa9.27□□□□□ -0.93
SSR1-201ENST00000244763 RGS3P49796 1198 aa9.27□□□□□ -0.93
SSR1-201ENST00000244763 ROCK2O75116 1388 aaKnown RBP9.27□□□□□ -0.93
SSR1-201ENST00000244763 CCDC9Q9Y3X0 531 aaKnown RBP9.27□□□□□ -0.93
SSR1-201ENST00000244763 CCDC18Q5T9S5 1454 aa9.26□□□□□ -0.93
SSR1-201ENST00000244763 GORABQ5T7V8 394 aa9.26□□□□□ -0.93
SSR1-201ENST00000244763 SIN3AQ96ST3 1273 aa9.26□□□□□ -0.93
SSR1-201ENST00000244763 CHMP4CQ96CF2 233 aa9.26□□□□□ -0.93
SSR1-201ENST00000244763 UACAQ9BZF9 1416 aa9.26□□□□□ -0.93
SSR1-201ENST00000244763 HMMRO75330 724 aa9.26□□□□□ -0.93
SSR1-201ENST00000244763 NUP155O75694 1391 aa9.25□□□□□ -0.93
SSR1-201ENST00000244763 NGDNQ8NEJ9 315 aaKnown RBP9.25□□□□□ -0.93
SSR1-201ENST00000244763 WASHC2CQ9Y4E1 1318 aa9.25□□□□□ -0.93
SSR1-201ENST00000244763 SAFB2Q14151 953 aaKnown RBP eCLIP9.25□□□□□ -0.93
SSR1-201ENST00000244763 PMFBP1Q8TBY8 1022 aa9.25□□□□□ -0.93
SSR1-201ENST00000244763 KIF3BO15066 747 aa9.25□□□□□ -0.93
SSR1-201ENST00000244763 CLSTN1O94985 981 aa9.25□□□□□ -0.93
SSR1-201ENST00000244763 RWDD1Q9H446 243 aaPredicted RBP9.25□□□□□ -0.93
SSR1-201ENST00000244763 U2AF1L5P0DN76 240 aaPredicted RBP9.24□□□□□ -0.93
SSR1-201ENST00000244763 U2AF1Q01081 240 aaKnown RBP eCLIP9.24□□□□□ -0.931e-7■□□□□ 8.3
SSR1-201ENST00000244763 VPS8Q8N3P4 1428 aa9.24□□□□□ -0.93
SSR1-201ENST00000244763 TPM4P67936 248 aa9.24□□□□□ -0.93
SSR1-201ENST00000244763 TAOK2Q9UL54 1235 aa9.24□□□□□ -0.93
SSR1-201ENST00000244763 CSPP1Q1MSJ5 1256 aa9.24□□□□□ -0.93
SSR1-201ENST00000244763 MPHOSPH9Q99550 1183 aa9.23□□□□□ -0.93
SSR1-201ENST00000244763 PHLDB1Q86UU1 1377 aa9.23□□□□□ -0.93
SSR1-201ENST00000244763 AMPHP49418 695 aa9.23□□□□□ -0.93
SSR1-201ENST00000244763 KIF3AQ9Y496 699 aa9.23□□□□□ -0.93
SSR1-201ENST00000244763 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
SSR1-201ENST00000244763 SYAP1Q96A49 352 aaPredicted RBP9.22□□□□□ -0.93
SSR1-201ENST00000244763 CECR2Q9BXF3 1484 aa9.22□□□□□ -0.93
SSR1-201ENST00000244763 LRRFIP1Q32MZ4 808 aaKnown RBP9.21□□□□□ -0.93
SSR1-201ENST00000244763 DRC7Q8IY82 874 aa9.21□□□□□ -0.93
SSR1-201ENST00000244763 GBP4Q96PP9 640 aa9.21□□□□□ -0.93
SSR1-201ENST00000244763 MSNP26038 577 aaKnown RBP9.21□□□□□ -0.94
SSR1-201ENST00000244763 GTF2E1P29083 439 aaPredicted RBP9.21□□□□□ -0.94
SSR1-201ENST00000244763 JPH4Q96JJ6 628 aa9.21□□□□□ -0.94
SSR1-201ENST00000244763 USP35Q9P2H5 1018 aa9.2□□□□□ -0.94
SSR1-201ENST00000244763 ZNF330Q9Y3S2 320 aaPredicted RBP9.2□□□□□ -0.94
SSR1-201ENST00000244763 CCDC88BA6NC98 1476 aa9.2□□□□□ -0.94
SSR1-201ENST00000244763 VGFO15240 615 aaPredicted RBP9.19□□□□□ -0.94
SSR1-201ENST00000244763 ANO8Q9HCE9 1232 aaPredicted RBP9.19□□□□□ -0.94
SSR1-201ENST00000244763 NOP58Q9Y2X3 529 aaKnown RBP9.19□□□□□ -0.94
SSR1-201ENST00000244763 CHMP3Q9Y3E7 222 aa9.19□□□□□ -0.94
SSR1-201ENST00000244763 EVA1CP58658 441 aa9.19□□□□□ -0.94
SSR1-201ENST00000244763 CADPSQ9ULU8 1353 aa9.18□□□□□ -0.94
SSR1-201ENST00000244763 HSPA5P11021 654 aaKnown RBP9.18□□□□□ -0.94
SSR1-201ENST00000244763 RAPGEF2Q9Y4G8 1499 aa9.18□□□□□ -0.94
SSR1-201ENST00000244763 FRAT2O75474 233 aaPredicted RBP9.18□□□□□ -0.94
SSR1-201ENST00000244763 TDRD9Q8NDG6 1382 aaKnown RBP9.17□□□□□ -0.94
SSR1-201ENST00000244763 PDE3BQ13370 1112 aa9.17□□□□□ -0.94
SSR1-201ENST00000244763 ITPRIPQ8IWB1 547 aa9.17□□□□□ -0.94
SSR1-201ENST00000244763 RCAN3Q9UKA8 241 aa9.17□□□□□ -0.94
SSR1-201ENST00000244763 C1orf141Q5JVX7 400 aa9.17□□□□□ -0.94
SSR1-201ENST00000244763 SMC4Q9NTJ3 1288 aa9.16□□□□□ -0.94
SSR1-201ENST00000244763 HNRNPMP52272 730 aaKnown RBP eCLIP9.16□□□□□ -0.94
SSR1-201ENST00000244763 STAC3Q96MF2 364 aa9.16□□□□□ -0.94
SSR1-201ENST00000244763 MYO15BQ96JP2 1530 aa9.16□□□□□ -0.94
SSR1-201ENST00000244763 AMOTL1Q8IY63 956 aa9.15□□□□□ -0.94
SSR1-201ENST00000244763 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.15□□□□□ -0.94
SSR1-201ENST00000244763 TOP2AP11388 1531 aaKnown RBP9.15□□□□□ -0.94
SSR1-201ENST00000244763 CEP89Q96ST8 783 aa9.15□□□□□ -0.95
SSR1-201ENST00000244763 TCERG1O14776 1098 aaKnown RBP9.15□□□□□ -0.95
SSR1-201ENST00000244763 NLRP13Q86W25 1043 aa9.15□□□□□ -0.95
SSR1-201ENST00000244763 OSCARQ8IYS5 282 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms