RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 RUSC2Q8N2Y8 1516 aa25.45■■□□□ 1.66
SOX4-201ENST00000244745 FMN1Q68DA7 1419 aa25.43■■□□□ 1.66
SOX4-201ENST00000244745 MORC1Q86VD1 984 aa25.42■■□□□ 1.66
SOX4-201ENST00000244745 IPO9Q96P70 1041 aaKnown RBP25.42■■□□□ 1.66
SOX4-201ENST00000244745 RALBP1Q15311 655 aa25.41■■□□□ 1.66
SOX4-201ENST00000244745 TCERG1O14776 1098 aaKnown RBP25.4■■□□□ 1.66
SOX4-201ENST00000244745 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
SOX4-201ENST00000244745 CHMP4BQ9H444 224 aaKnown RBP25.4■■□□□ 1.66
SOX4-201ENST00000244745 ARID4BQ4LE39 1312 aaPredicted RBP25.39■■□□□ 1.65
SOX4-201ENST00000244745 FHOD3Q2V2M9 1422 aa25.39■■□□□ 1.65
SOX4-201ENST00000244745 L3MBTL2Q969R5 705 aa25.38■■□□□ 1.65
SOX4-201ENST00000244745 KANK1Q14678 1352 aa25.37■■□□□ 1.65
SOX4-201ENST00000244745 PLCB2Q00722 1185 aa25.36■■□□□ 1.65
SOX4-201ENST00000244745 MSNP26038 577 aaKnown RBP25.36■■□□□ 1.65
SOX4-201ENST00000244745 PNNQ9H307 717 aaKnown RBP25.35■■□□□ 1.65
SOX4-201ENST00000244745 A0A0G2JS52 829 aa25.35■■□□□ 1.65
SOX4-201ENST00000244745 NUP155O75694 1391 aa25.33■■□□□ 1.65
SOX4-201ENST00000244745 ZRSR1Q15695 479 aaKnown RBP25.32■■□□□ 1.64
SOX4-201ENST00000244745 SAFB2Q14151 953 aaKnown RBP eCLIP25.3■■□□□ 1.64
SOX4-201ENST00000244745 SRPK2P78362 688 aaKnown RBP25.29■■□□□ 1.64
SOX4-201ENST00000244745 SLKQ9H2G2 1235 aaPredicted RBP25.27■■□□□ 1.64
SOX4-201ENST00000244745 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
SOX4-201ENST00000244745 ANKRD30AQ9BXX3 1397 aa25.26■■□□□ 1.63
SOX4-201ENST00000244745 CDK11BP21127 795 aaKnown RBP25.26■■□□□ 1.63
SOX4-201ENST00000244745 OS9Q13438 667 aaPredicted RBP25.25■■□□□ 1.63
SOX4-201ENST00000244745 GZF1Q9H116 711 aaPredicted RBP25.23■■□□□ 1.63
SOX4-201ENST00000244745 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
SOX4-201ENST00000244745 CCDC146Q8IYE0 955 aa25.2■■□□□ 1.63
SOX4-201ENST00000244745 ITPRIPQ8IWB1 547 aa25.2■■□□□ 1.62
SOX4-201ENST00000244745 TAOK2Q9UL54 1235 aa25.19■■□□□ 1.62
SOX4-201ENST00000244745 RWDD1Q9H446 243 aaPredicted RBP25.19■■□□□ 1.62
SOX4-201ENST00000244745 KCNJ4P48050 445 aa25.16■■□□□ 1.62
SOX4-201ENST00000244745 STK26Q9P289 416 aa25.16■■□□□ 1.62
SOX4-201ENST00000244745 SOX12O15370 315 aa25.16■■□□□ 1.62
SOX4-201ENST00000244745 U2AF1L5P0DN76 240 aaPredicted RBP25.16■■□□□ 1.62
SOX4-201ENST00000244745 U2AF1Q01081 240 aaKnown RBP eCLIP25.16■■□□□ 1.62
SOX4-201ENST00000244745 APBB1O00213 710 aa25.15■■□□□ 1.62
SOX4-201ENST00000244745 GOLGA2Q08379 1002 aa25.15■■□□□ 1.62
SOX4-201ENST00000244745 CHAF1AQ13111 956 aaPredicted RBP25.15■■□□□ 1.62
SOX4-201ENST00000244745 KIF15Q9NS87 1388 aa25.15■■□□□ 1.62
SOX4-201ENST00000244745 NLRP13Q86W25 1043 aa25.15■■□□□ 1.62
SOX4-201ENST00000244745 CARMIL2Q6F5E8 1435 aa25.15■■□□□ 1.62
SOX4-201ENST00000244745 IPO8O15397 1037 aaKnown RBP25.14■■□□□ 1.61
SOX4-201ENST00000244745 FANCIQ9NVI1 1328 aa25.14■■□□□ 1.61
SOX4-201ENST00000244745 ARID3AQ99856 593 aa25.13■■□□□ 1.61
SOX4-201ENST00000244745 GOLGA6L3A6NEY3 463 aa25.13■■□□□ 1.61
SOX4-201ENST00000244745 MCCP23508 829 aa25.13■■□□□ 1.61
SOX4-201ENST00000244745 PMFBP1Q8TBY8 1022 aa25.13■■□□□ 1.61
SOX4-201ENST00000244745 MFAP1P55081 439 aaKnown RBP25.13■■□□□ 1.61
SOX4-201ENST00000244745 CCDC18Q5T9S5 1454 aa25.12■■□□□ 1.61
SOX4-201ENST00000244745 HNRNPMP52272 730 aaKnown RBP eCLIP25.12■■□□□ 1.61
SOX4-201ENST00000244745 PDE3BQ13370 1112 aa25.12■■□□□ 1.61
SOX4-201ENST00000244745 MYBBP1AQ9BQG0 1328 aaKnown RBP25.11■■□□□ 1.61
SOX4-201ENST00000244745 FGD1P98174 961 aa25.11■■□□□ 1.61
SOX4-201ENST00000244745 GBP4Q96PP9 640 aa25.11■■□□□ 1.61
SOX4-201ENST00000244745 PRKRIP1Q9H875 184 aaPredicted RBP25.1■■□□□ 1.61
SOX4-201ENST00000244745 AMER1Q5JTC6 1135 aaPredicted RBP25.1■■□□□ 1.61
SOX4-201ENST00000244745 LMOD2Q6P5Q4 547 aa25.1■■□□□ 1.61
SOX4-201ENST00000244745 NAP1L2Q9ULW6 460 aaPredicted RBP25.1■■□□□ 1.61
SOX4-201ENST00000244745 EIF3AQ14152 1382 aaKnown RBP25.08■■□□□ 1.61
SOX4-201ENST00000244745 GGT6Q6P531 493 aa25.08■■□□□ 1.61
SOX4-201ENST00000244745 ZBED9Q6R2W3 1325 aa25.08■■□□□ 1.6
SOX4-201ENST00000244745 GOLGA6L6A8MZA4 724 aa25.07■■□□□ 1.6
SOX4-201ENST00000244745 HDGFL2Q7Z4V5 671 aaPredicted RBP25.07■■□□□ 1.6
SOX4-201ENST00000244745 USP35Q9P2H5 1018 aa25.06■■□□□ 1.6
SOX4-201ENST00000244745 PLIN1O60240 522 aa25.06■■□□□ 1.6
SOX4-201ENST00000244745 CFAP44Q96MT7 982 aa25.06■■□□□ 1.6
SOX4-201ENST00000244745 GOLGA6L4A6NEF3 574 aa25.06■■□□□ 1.6
SOX4-201ENST00000244745 PTMSP20962 102 aa25.06■■□□□ 1.6
SOX4-201ENST00000244745 EXOC6Q8TAG9 804 aa25.06■■□□□ 1.6
SOX4-201ENST00000244745 HAP1P54257 671 aaPredicted RBP25.05■■□□□ 1.6
SOX4-201ENST00000244745 PDS5BQ9NTI5 1447 aa25.05■■□□□ 1.6
SOX4-201ENST00000244745 CLUAP1Q96AJ1 413 aa25.05■■□□□ 1.6
SOX4-201ENST00000244745 ST20-MTHFSA0A0A6YYL1 179 aa25.04■■□□□ 1.6
SOX4-201ENST00000244745 CENPJQ9HC77 1338 aaPredicted RBP25.04■■□□□ 1.6
SOX4-201ENST00000244745 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
SOX4-201ENST00000244745 RSPH6AQ9H0K4 717 aa25.04■■□□□ 1.6
SOX4-201ENST00000244745 SMC4Q9NTJ3 1288 aa25.04■■□□□ 1.6
SOX4-201ENST00000244745 PDE4AP27815 886 aa25.03■■□□□ 1.6
SOX4-201ENST00000244745 RRP1P56182 461 aaKnown RBP25.03■■□□□ 1.6
SOX4-201ENST00000244745 PHLDB1Q86UU1 1377 aa25.03■■□□□ 1.6
SOX4-201ENST00000244745 RTF1Q92541 710 aaKnown RBP25.01■■□□□ 1.59
SOX4-201ENST00000244745 SLC4A3P48751 1232 aa25■■□□□ 1.59
SOX4-201ENST00000244745 PANK3Q9H999 370 aa24.99■■□□□ 1.59
SOX4-201ENST00000244745 GSE1Q14687 1217 aa24.99■■□□□ 1.59
SOX4-201ENST00000244745 MLECQ14165 292 aa24.99■■□□□ 1.59
SOX4-201ENST00000244745 CADPSQ9ULU8 1353 aa24.99■■□□□ 1.59
SOX4-201ENST00000244745 DRC7Q8IY82 874 aa24.99■■□□□ 1.59
SOX4-201ENST00000244745 CRBNQ96SW2 442 aa24.98■■□□□ 1.59
SOX4-201ENST00000244745 KIF21BO75037 1637 aa24.98■■□□□ 1.59
SOX4-201ENST00000244745 FOXD4L1Q9NU39 408 aa24.97■■□□□ 1.59
SOX4-201ENST00000244745 USP47Q96K76 1375 aa24.97■■□□□ 1.59
SOX4-201ENST00000244745 CALD1Q05682 793 aaKnown RBP24.96■■□□□ 1.59
SOX4-201ENST00000244745 HSP90AA2PQ14568 343 aaPredicted RBP24.96■■□□□ 1.59
SOX4-201ENST00000244745 CENPQQ7L2Z9 268 aaPredicted RBP24.95■■□□□ 1.58
SOX4-201ENST00000244745 RRP7AQ9Y3A4 280 aaKnown RBP24.93■■□□□ 1.58
SOX4-201ENST00000244745 EFCAB2Q5VUJ9 269 aa24.93■■□□□ 1.58
SOX4-201ENST00000244745 FAM161AQ3B820 660 aa24.92■■□□□ 1.58
SOX4-201ENST00000244745 KIAA2012Q0VF49 1180 aa24.91■■□□□ 1.58
SOX4-201ENST00000244745 NRDCO43847 1150 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms