RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ARHGEF11O15085 1522 aa28.14■■■□□ 2.1
HOXC13-201ENST00000243056 CYB5RLQ6IPT4 315 aa28.14■■■□□ 2.1
HOXC13-201ENST00000243056 ZNF777Q9ULD5 760 aaPredicted RBP28.12■■■□□ 2.09
HOXC13-201ENST00000243056 SALL2Q9Y467 1007 aaPredicted RBP28.12■■■□□ 2.09
HOXC13-201ENST00000243056 ADCY10Q96PN6 1610 aa28.1■■■□□ 2.09
HOXC13-201ENST00000243056 FANCIQ9NVI1 1328 aa28.08■■■□□ 2.09
HOXC13-201ENST00000243056 MYT1LQ9UL68 1186 aa28.07■■■□□ 2.08
HOXC13-201ENST00000243056 CHIC2Q9UKJ5 165 aa28.06■■■□□ 2.08
HOXC13-201ENST00000243056 ZCCHC11Q5TAX3 1644 aaKnown RBP28.04■■■□□ 2.08
HOXC13-201ENST00000243056 CFDP1Q9UEE9 299 aaPredicted RBP28.04■■■□□ 2.08
HOXC13-201ENST00000243056 PTPRKQ15262 1439 aa28.03■■■□□ 2.08
HOXC13-201ENST00000243056 KDM5BQ9UGL1 1544 aa28.02■■■□□ 2.08
HOXC13-201ENST00000243056 UHRF1BP1LA0JNW5 1464 aa28.02■■■□□ 2.08
HOXC13-201ENST00000243056 PTPN23Q9H3S7 1636 aa28■■■□□ 2.07
HOXC13-201ENST00000243056 GPATCH8Q9UKJ3 1502 aaKnown RBP28■■■□□ 2.07
HOXC13-201ENST00000243056 CCDC136Q96JN2 1154 aa27.96■■■□□ 2.07
HOXC13-201ENST00000243056 ABCC10Q5T3U5 1492 aa27.96■■■□□ 2.07
HOXC13-201ENST00000243056 RIMBP3CA6NJZ7 1639 aa27.94■■■□□ 2.06
HOXC13-201ENST00000243056 RIMBP3BA6NNM3 1639 aa27.94■■■□□ 2.06
HOXC13-201ENST00000243056 RIMBP3Q9UFD9 1639 aa27.94■■■□□ 2.06
HOXC13-201ENST00000243056 RRP7BPQ9NSQ0 103 aa27.92■■■□□ 2.06
HOXC13-201ENST00000243056 NPM1P06748 294 aaKnown RBP eCLIP27.91■■■□□ 2.06
HOXC13-201ENST00000243056 UBE2Q2Q8WVN8 375 aa27.91■■■□□ 2.06
HOXC13-201ENST00000243056 MIA2Q96PC5 1412 aa27.9■■■□□ 2.06
HOXC13-201ENST00000243056 TTC37Q6PGP7 1564 aa27.89■■■□□ 2.05
HOXC13-201ENST00000243056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.88■■■□□ 2.05
HOXC13-201ENST00000243056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.87■■■□□ 2.05
HOXC13-201ENST00000243056 ERICH6BQ5W0A0 696 aa27.87■■■□□ 2.05
HOXC13-201ENST00000243056 ASXL2Q76L83 1435 aa27.87■■■□□ 2.05
HOXC13-201ENST00000243056 TCOF1Q13428 1488 aaKnown RBP27.86■■■□□ 2.05
HOXC13-201ENST00000243056 RAB3GAP2Q9H2M9 1393 aa27.86■■■□□ 2.05
HOXC13-201ENST00000243056 NEFLP07196 543 aa27.86■■■□□ 2.05
HOXC13-201ENST00000243056 HNRNPMP52272 730 aaKnown RBP eCLIP27.86■■■□□ 2.05
HOXC13-201ENST00000243056 CDC42BPAQ5VT25 1732 aa27.86■■■□□ 2.05
HOXC13-201ENST00000243056 CAMSAP2Q08AD1 1489 aa27.84■■■□□ 2.05
HOXC13-201ENST00000243056 WDR7Q9Y4E6 1490 aa27.81■■■□□ 2.04
HOXC13-201ENST00000243056 ABCC5O15440 1437 aa27.79■■■□□ 2.04
HOXC13-201ENST00000243056 SETD5Q9C0A6 1442 aa27.79■■■□□ 2.04
HOXC13-201ENST00000243056 DAPK1P53355 1430 aa27.76■■■□□ 2.03
HOXC13-201ENST00000243056 ITSN2Q9NZM3 1697 aa27.75■■■□□ 2.03
HOXC13-201ENST00000243056 CDC42BPBQ9Y5S2 1711 aa27.75■■■□□ 2.03
HOXC13-201ENST00000243056 ARHGAP5Q13017 1502 aa27.75■■■□□ 2.03
HOXC13-201ENST00000243056 NAIPQ13075 1403 aa27.7■■■□□ 2.02
HOXC13-201ENST00000243056 DHX57Q6P158 1386 aaKnown RBP27.7■■■□□ 2.02
HOXC13-201ENST00000243056 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
HOXC13-201ENST00000243056 SAMD9LQ8IVG5 1584 aa27.68■■■□□ 2.02
HOXC13-201ENST00000243056 PLCH2O75038 1416 aa27.67■■■□□ 2.02
HOXC13-201ENST00000243056 HFM1A2PYH4 1435 aa27.66■■■□□ 2.02
HOXC13-201ENST00000243056 DNMT1P26358 1616 aaKnown RBP27.66■■■□□ 2.02
HOXC13-201ENST00000243056 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.66■■■□□ 2.02
HOXC13-201ENST00000243056 EFCAB2Q5VUJ9 269 aa27.63■■■□□ 2.01
HOXC13-201ENST00000243056 MYO5CQ9NQX4 1742 aa27.63■■■□□ 2.01
HOXC13-201ENST00000243056 KDM6BO15054 1643 aa27.63■■■□□ 2.01
HOXC13-201ENST00000243056 IL27Q8NEV9 243 aa27.62■■■□□ 2.01
HOXC13-201ENST00000243056 SYCP2Q9BX26 1530 aa27.62■■■□□ 2.01
HOXC13-201ENST00000243056 MBD5Q9P267 1494 aa27.62■■■□□ 2.01
HOXC13-201ENST00000243056 ARHGEF12Q9NZN5 1544 aa27.61■■■□□ 2.01
HOXC13-201ENST00000243056 TSPY4P0CV99 314 aa27.59■■■□□ 2.01
HOXC13-201ENST00000243056 TSPY10P0CW01 314 aa27.59■■■□□ 2.01
HOXC13-201ENST00000243056 NBR1Q14596 966 aa27.59■■■□□ 2.01
HOXC13-201ENST00000243056 AFAP1Q8N556 730 aa27.59■■■□□ 2.01
HOXC13-201ENST00000243056 AKNAQ7Z591 1439 aa27.59■■■□□ 2.01
HOXC13-201ENST00000243056 TRIM52Q96A61 297 aa27.57■■■□□ 2
HOXC13-201ENST00000243056 NCOA1Q15788 1441 aa27.55■■■□□ 2
HOXC13-201ENST00000243056 C9orf84Q5VXU9 1444 aa27.54■■■□□ 2
HOXC13-201ENST00000243056 ABCA9Q8IUA7 1624 aa27.54■■■□□ 2
HOXC13-201ENST00000243056 RTN4Q9NQC3 1192 aaKnown RBP27.53■■■□□ 2
HOXC13-201ENST00000243056 TRAPPC8Q9Y2L5 1435 aa27.53■■■□□ 2
HOXC13-201ENST00000243056 FANCAO15360 1455 aa27.53■■■□□ 2
HOXC13-201ENST00000243056 FAM69CQ0P6D2 419 aa27.53■■■□□ 2
HOXC13-201ENST00000243056 CD109Q6YHK3 1445 aa27.53■■■□□ 2
HOXC13-201ENST00000243056 CCDC141Q6ZP82 1450 aa27.48■■□□□ 1.99
HOXC13-201ENST00000243056 ROCK1Q13464 1354 aa27.48■■□□□ 1.99
HOXC13-201ENST00000243056 FOXD1Q16676 465 aa27.47■■□□□ 1.99
HOXC13-201ENST00000243056 SIN3AQ96ST3 1273 aa27.47■■□□□ 1.99
HOXC13-201ENST00000243056 ANKRD30AQ9BXX3 1397 aa27.47■■□□□ 1.99
HOXC13-201ENST00000243056 CROCC2H7BZ55 1655 aa27.46■■□□□ 1.99
HOXC13-201ENST00000243056 MAPKBP1O60336 1514 aa27.45■■□□□ 1.98
HOXC13-201ENST00000243056 NOP58Q9Y2X3 529 aaKnown RBP27.45■■□□□ 1.98
HOXC13-201ENST00000243056 SCAPERQ9BY12 1400 aa27.44■■□□□ 1.98
HOXC13-201ENST00000243056 KIAA1107Q9UPP5 1409 aa27.43■■□□□ 1.98
HOXC13-201ENST00000243056 ABCC1P33527 1531 aa27.43■■□□□ 1.98
HOXC13-201ENST00000243056 PAK3O75914 559 aaPredicted RBP27.42■■□□□ 1.98
HOXC13-201ENST00000243056 KIF15Q9NS87 1388 aa27.42■■□□□ 1.98
HOXC13-201ENST00000243056 ARHGEF5Q12774 1597 aa27.42■■□□□ 1.98
HOXC13-201ENST00000243056 GCC2Q8IWJ2 1684 aa27.42■■□□□ 1.98
HOXC13-201ENST00000243056 ADGRL1O94910 1474 aa27.41■■□□□ 1.98
HOXC13-201ENST00000243056 RSPH4AQ5TD94 716 aa27.39■■□□□ 1.98
HOXC13-201ENST00000243056 ADGRL2O95490 1459 aa27.39■■□□□ 1.97
HOXC13-201ENST00000243056 RAPGEF3O95398 923 aa27.38■■□□□ 1.97
HOXC13-201ENST00000243056 ANKRD50Q9ULJ7 1429 aa27.38■■□□□ 1.97
HOXC13-201ENST00000243056 PLEKHH2Q8IVE3 1493 aa27.37■■□□□ 1.97
HOXC13-201ENST00000243056 SPAG9O60271 1321 aaKnown RBP27.37■■□□□ 1.97
HOXC13-201ENST00000243056 SHANK2Q9UPX8 1470 aa27.36■■□□□ 1.97
HOXC13-201ENST00000243056 IRX6P78412 446 aaPredicted RBP27.36■■□□□ 1.97
HOXC13-201ENST00000243056 ADGBQ8N7X0 1667 aa27.35■■□□□ 1.97
HOXC13-201ENST00000243056 MPHOSPH9Q99550 1183 aa27.35■■□□□ 1.97
HOXC13-201ENST00000243056 ARAP3Q8WWN8 1544 aa27.34■■□□□ 1.97
HOXC13-201ENST00000243056 DENND4BO75064 1496 aaPredicted RBP27.32■■□□□ 1.96
HOXC13-201ENST00000243056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms