RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ARHGEF11O15085 1522 aa28.14■■■□□ 2.1
HOXC13-201ENST00000243056 CYB5RLQ6IPT4 315 aa28.14■■■□□ 2.1
HOXC13-201ENST00000243056 ZNF777Q9ULD5 760 aaPredicted RBP28.12■■■□□ 2.09
HOXC13-201ENST00000243056 SALL2Q9Y467 1007 aaPredicted RBP28.12■■■□□ 2.09
HOXC13-201ENST00000243056 ADCY10Q96PN6 1610 aa28.1■■■□□ 2.09
HOXC13-201ENST00000243056 FANCIQ9NVI1 1328 aa28.08■■■□□ 2.09
HOXC13-201ENST00000243056 MYT1LQ9UL68 1186 aa28.07■■■□□ 2.08
HOXC13-201ENST00000243056 CHIC2Q9UKJ5 165 aa28.06■■■□□ 2.08
HOXC13-201ENST00000243056 ZCCHC11Q5TAX3 1644 aaKnown RBP28.04■■■□□ 2.08
HOXC13-201ENST00000243056 CFDP1Q9UEE9 299 aaPredicted RBP28.04■■■□□ 2.08
HOXC13-201ENST00000243056 PTPRKQ15262 1439 aa28.03■■■□□ 2.08
HOXC13-201ENST00000243056 KDM5BQ9UGL1 1544 aa28.02■■■□□ 2.08
HOXC13-201ENST00000243056 UHRF1BP1LA0JNW5 1464 aa28.02■■■□□ 2.08
HOXC13-201ENST00000243056 PTPN23Q9H3S7 1636 aa28■■■□□ 2.07
HOXC13-201ENST00000243056 GPATCH8Q9UKJ3 1502 aaKnown RBP28■■■□□ 2.07
HOXC13-201ENST00000243056 CCDC136Q96JN2 1154 aa27.96■■■□□ 2.07
HOXC13-201ENST00000243056 ABCC10Q5T3U5 1492 aa27.96■■■□□ 2.07
HOXC13-201ENST00000243056 RIMBP3CA6NJZ7 1639 aa27.94■■■□□ 2.06
HOXC13-201ENST00000243056 RIMBP3BA6NNM3 1639 aa27.94■■■□□ 2.06
HOXC13-201ENST00000243056 RIMBP3Q9UFD9 1639 aa27.94■■■□□ 2.06
HOXC13-201ENST00000243056 RRP7BPQ9NSQ0 103 aa27.92■■■□□ 2.06
HOXC13-201ENST00000243056 NPM1P06748 294 aaKnown RBP eCLIP27.91■■■□□ 2.06
HOXC13-201ENST00000243056 UBE2Q2Q8WVN8 375 aa27.91■■■□□ 2.06
HOXC13-201ENST00000243056 MIA2Q96PC5 1412 aa27.9■■■□□ 2.06
HOXC13-201ENST00000243056 TTC37Q6PGP7 1564 aa27.89■■■□□ 2.05
HOXC13-201ENST00000243056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.88■■■□□ 2.05
HOXC13-201ENST00000243056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.87■■■□□ 2.05
HOXC13-201ENST00000243056 ERICH6BQ5W0A0 696 aa27.87■■■□□ 2.05
HOXC13-201ENST00000243056 ASXL2Q76L83 1435 aa27.87■■■□□ 2.05
HOXC13-201ENST00000243056 TCOF1Q13428 1488 aaKnown RBP27.86■■■□□ 2.05
HOXC13-201ENST00000243056 RAB3GAP2Q9H2M9 1393 aa27.86■■■□□ 2.05
HOXC13-201ENST00000243056 NEFLP07196 543 aa27.86■■■□□ 2.05
HOXC13-201ENST00000243056 HNRNPMP52272 730 aaKnown RBP eCLIP27.86■■■□□ 2.05
HOXC13-201ENST00000243056 CDC42BPAQ5VT25 1732 aa27.86■■■□□ 2.05
HOXC13-201ENST00000243056 CAMSAP2Q08AD1 1489 aa27.84■■■□□ 2.05
HOXC13-201ENST00000243056 WDR7Q9Y4E6 1490 aa27.81■■■□□ 2.04
HOXC13-201ENST00000243056 ABCC5O15440 1437 aa27.79■■■□□ 2.04
HOXC13-201ENST00000243056 SETD5Q9C0A6 1442 aa27.79■■■□□ 2.04
HOXC13-201ENST00000243056 DAPK1P53355 1430 aa27.76■■■□□ 2.03
HOXC13-201ENST00000243056 ITSN2Q9NZM3 1697 aa27.75■■■□□ 2.03
HOXC13-201ENST00000243056 CDC42BPBQ9Y5S2 1711 aa27.75■■■□□ 2.03
HOXC13-201ENST00000243056 ARHGAP5Q13017 1502 aa27.75■■■□□ 2.03
HOXC13-201ENST00000243056 NAIPQ13075 1403 aa27.7■■■□□ 2.02
HOXC13-201ENST00000243056 DHX57Q6P158 1386 aaKnown RBP27.7■■■□□ 2.02
HOXC13-201ENST00000243056 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
HOXC13-201ENST00000243056 SAMD9LQ8IVG5 1584 aa27.68■■■□□ 2.02
HOXC13-201ENST00000243056 PLCH2O75038 1416 aa27.67■■■□□ 2.02
HOXC13-201ENST00000243056 HFM1A2PYH4 1435 aa27.66■■■□□ 2.02
HOXC13-201ENST00000243056 DNMT1P26358 1616 aaKnown RBP27.66■■■□□ 2.02
HOXC13-201ENST00000243056 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.66■■■□□ 2.02
HOXC13-201ENST00000243056 EFCAB2Q5VUJ9 269 aa27.63■■■□□ 2.01
HOXC13-201ENST00000243056 MYO5CQ9NQX4 1742 aa27.63■■■□□ 2.01
HOXC13-201ENST00000243056 KDM6BO15054 1643 aa27.63■■■□□ 2.01
HOXC13-201ENST00000243056 IL27Q8NEV9 243 aa27.62■■■□□ 2.01
HOXC13-201ENST00000243056 SYCP2Q9BX26 1530 aa27.62■■■□□ 2.01
HOXC13-201ENST00000243056 MBD5Q9P267 1494 aa27.62■■■□□ 2.01
HOXC13-201ENST00000243056 ARHGEF12Q9NZN5 1544 aa27.61■■■□□ 2.01
HOXC13-201ENST00000243056 TSPY4P0CV99 314 aa27.59■■■□□ 2.01
HOXC13-201ENST00000243056 TSPY10P0CW01 314 aa27.59■■■□□ 2.01
HOXC13-201ENST00000243056 NBR1Q14596 966 aa27.59■■■□□ 2.01
HOXC13-201ENST00000243056 AFAP1Q8N556 730 aa27.59■■■□□ 2.01
HOXC13-201ENST00000243056 AKNAQ7Z591 1439 aa27.59■■■□□ 2.01
HOXC13-201ENST00000243056 TRIM52Q96A61 297 aa27.57■■■□□ 2
HOXC13-201ENST00000243056 NCOA1Q15788 1441 aa27.55■■■□□ 2
HOXC13-201ENST00000243056 C9orf84Q5VXU9 1444 aa27.54■■■□□ 2
HOXC13-201ENST00000243056 ABCA9Q8IUA7 1624 aa27.54■■■□□ 2
HOXC13-201ENST00000243056 RTN4Q9NQC3 1192 aaKnown RBP27.53■■■□□ 2
HOXC13-201ENST00000243056 TRAPPC8Q9Y2L5 1435 aa27.53■■■□□ 2
HOXC13-201ENST00000243056 FANCAO15360 1455 aa27.53■■■□□ 2
HOXC13-201ENST00000243056 FAM69CQ0P6D2 419 aa27.53■■■□□ 2
HOXC13-201ENST00000243056 CD109Q6YHK3 1445 aa27.53■■■□□ 2
HOXC13-201ENST00000243056 CCDC141Q6ZP82 1450 aa27.48■■□□□ 1.99
HOXC13-201ENST00000243056 ROCK1Q13464 1354 aa27.48■■□□□ 1.99
HOXC13-201ENST00000243056 FOXD1Q16676 465 aa27.47■■□□□ 1.99
HOXC13-201ENST00000243056 SIN3AQ96ST3 1273 aa27.47■■□□□ 1.99
HOXC13-201ENST00000243056 ANKRD30AQ9BXX3 1397 aa27.47■■□□□ 1.99
HOXC13-201ENST00000243056 CROCC2H7BZ55 1655 aa27.46■■□□□ 1.99
HOXC13-201ENST00000243056 MAPKBP1O60336 1514 aa27.45■■□□□ 1.98
HOXC13-201ENST00000243056 NOP58Q9Y2X3 529 aaKnown RBP27.45■■□□□ 1.98
HOXC13-201ENST00000243056 SCAPERQ9BY12 1400 aa27.44■■□□□ 1.98
HOXC13-201ENST00000243056 KIAA1107Q9UPP5 1409 aa27.43■■□□□ 1.98
HOXC13-201ENST00000243056 ABCC1P33527 1531 aa27.43■■□□□ 1.98
HOXC13-201ENST00000243056 PAK3O75914 559 aaPredicted RBP27.42■■□□□ 1.98
HOXC13-201ENST00000243056 KIF15Q9NS87 1388 aa27.42■■□□□ 1.98
HOXC13-201ENST00000243056 ARHGEF5Q12774 1597 aa27.42■■□□□ 1.98
HOXC13-201ENST00000243056 GCC2Q8IWJ2 1684 aa27.42■■□□□ 1.98
HOXC13-201ENST00000243056 ADGRL1O94910 1474 aa27.41■■□□□ 1.98
HOXC13-201ENST00000243056 RSPH4AQ5TD94 716 aa27.39■■□□□ 1.98
HOXC13-201ENST00000243056 ADGRL2O95490 1459 aa27.39■■□□□ 1.97
HOXC13-201ENST00000243056 RAPGEF3O95398 923 aa27.38■■□□□ 1.97
HOXC13-201ENST00000243056 ANKRD50Q9ULJ7 1429 aa27.38■■□□□ 1.97
HOXC13-201ENST00000243056 PLEKHH2Q8IVE3 1493 aa27.37■■□□□ 1.97
HOXC13-201ENST00000243056 SPAG9O60271 1321 aaKnown RBP27.37■■□□□ 1.97
HOXC13-201ENST00000243056 SHANK2Q9UPX8 1470 aa27.36■■□□□ 1.97
HOXC13-201ENST00000243056 IRX6P78412 446 aaPredicted RBP27.36■■□□□ 1.97
HOXC13-201ENST00000243056 ADGBQ8N7X0 1667 aa27.35■■□□□ 1.97
HOXC13-201ENST00000243056 MPHOSPH9Q99550 1183 aa27.35■■□□□ 1.97
HOXC13-201ENST00000243056 ARAP3Q8WWN8 1544 aa27.34■■□□□ 1.97
HOXC13-201ENST00000243056 DENND4BO75064 1496 aaPredicted RBP27.32■■□□□ 1.96
HOXC13-201ENST00000243056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms