RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 PTPRMP28827 1452 aa26.96■■□□□ 1.91
CLTA-201ENST00000242285 BCORL1Q5H9F3 1711 aa26.94■■□□□ 1.9
CLTA-201ENST00000242285 MAGI2Q86UL8 1455 aa26.93■■□□□ 1.9
CLTA-201ENST00000242285 CDC42BPBQ9Y5S2 1711 aa26.9■■□□□ 1.9
CLTA-201ENST00000242285 PREX2Q70Z35 1606 aa26.88■■□□□ 1.89
CLTA-201ENST00000242285 ARID4BQ4LE39 1312 aaPredicted RBP26.87■■□□□ 1.89
CLTA-201ENST00000242285 CDC42BPAQ5VT25 1732 aa26.86■■□□□ 1.89
CLTA-201ENST00000242285 POGZQ7Z3K3 1410 aa26.86■■□□□ 1.89
CLTA-201ENST00000242285 MADDQ8WXG6 1647 aa26.85■■□□□ 1.89
CLTA-201ENST00000242285 ZFYVE16Q7Z3T8 1539 aa26.85■■□□□ 1.89
CLTA-201ENST00000242285 LOC105371045A0A1W2PR82 267 aa26.84■■□□□ 1.89
CLTA-201ENST00000242285 ILDR1Q86SU0 546 aaPredicted RBP26.84■■□□□ 1.89
CLTA-201ENST00000242285 EFCAB2Q5VUJ9 269 aa26.82■■□□□ 1.88
CLTA-201ENST00000242285 SCAPERQ9BY12 1400 aa26.81■■□□□ 1.88
CLTA-201ENST00000242285 ARHGAP5Q13017 1502 aa26.8■■□□□ 1.88
CLTA-201ENST00000242285 YEATS2Q9ULM3 1422 aa26.77■■□□□ 1.88
CLTA-201ENST00000242285 EHBP1L1Q8N3D4 1523 aa26.76■■□□□ 1.87
CLTA-201ENST00000242285 VPS8Q8N3P4 1428 aa26.75■■□□□ 1.87
CLTA-201ENST00000242285 ZNF518AQ6AHZ1 1483 aa26.73■■□□□ 1.87
CLTA-201ENST00000242285 MTUS2Q5JR59 1369 aa26.72■■□□□ 1.87
CLTA-201ENST00000242285 RIMS1Q86UR5 1692 aaKnown RBP26.71■■□□□ 1.87
CLTA-201ENST00000242285 ITSN2Q9NZM3 1697 aa26.71■■□□□ 1.87
CLTA-201ENST00000242285 LMTK3Q96Q04 1460 aa26.71■■□□□ 1.87
CLTA-201ENST00000242285 KDM5CP41229 1560 aa26.71■■□□□ 1.87
CLTA-201ENST00000242285 ABCC1P33527 1531 aa26.7■■□□□ 1.87
CLTA-201ENST00000242285 ATP10AO60312 1499 aa26.7■■□□□ 1.87
CLTA-201ENST00000242285 TIAM1Q13009 1591 aa26.69■■□□□ 1.86
CLTA-201ENST00000242285 C9orf84Q5VXU9 1444 aa26.69■■□□□ 1.86
CLTA-201ENST00000242285 GPATCH8Q9UKJ3 1502 aaKnown RBP26.68■■□□□ 1.86
CLTA-201ENST00000242285 SIGLEC1Q9BZZ2 1709 aa26.66■■□□□ 1.86
CLTA-201ENST00000242285 MAP3K1Q13233 1512 aa26.65■■□□□ 1.86
CLTA-201ENST00000242285 SUPT6HQ7KZ85 1726 aaKnown RBP26.65■■□□□ 1.86
CLTA-201ENST00000242285 ARHGEF12Q9NZN5 1544 aa26.64■■□□□ 1.85
CLTA-201ENST00000242285 SAMD9LQ8IVG5 1584 aa26.63■■□□□ 1.85
CLTA-201ENST00000242285 REREQ9P2R6 1566 aa26.61■■□□□ 1.85
CLTA-201ENST00000242285 CCNB3Q8WWL7 1395 aa26.6■■□□□ 1.85
CLTA-201ENST00000242285 FER1L4A9Z1Z3 1794 aa26.59■■□□□ 1.85
CLTA-201ENST00000242285 PLEKHH2Q8IVE3 1493 aa26.58■■□□□ 1.85
CLTA-201ENST00000242285 MLH3Q9UHC1 1453 aa26.58■■□□□ 1.85
CLTA-201ENST00000242285 KIAA1107Q9UPP5 1409 aa26.56■■□□□ 1.84
CLTA-201ENST00000242285 LRRC9Q6ZRR7 1453 aa26.55■■□□□ 1.84
CLTA-201ENST00000242285 AFAP1Q8N556 730 aa26.54■■□□□ 1.84
CLTA-201ENST00000242285 TRAPPC8Q9Y2L5 1435 aa26.54■■□□□ 1.84
CLTA-201ENST00000242285 SYCP2Q9BX26 1530 aa26.54■■□□□ 1.84
CLTA-201ENST00000242285 KIDINS220Q9ULH0 1771 aa26.53■■□□□ 1.84
CLTA-201ENST00000242285 FBXO41Q8TF61 875 aa26.53■■□□□ 1.84
CLTA-201ENST00000242285 NCOA2Q15596 1464 aa26.53■■□□□ 1.84
CLTA-201ENST00000242285 DIP2CQ9Y2E4 1556 aa26.53■■□□□ 1.84
CLTA-201ENST00000242285 MLECQ14165 292 aa26.52■■□□□ 1.84
CLTA-201ENST00000242285 CFDP1Q9UEE9 299 aaPredicted RBP26.52■■□□□ 1.84
CLTA-201ENST00000242285 ABCA6Q8N139 1617 aa26.5■■□□□ 1.83
CLTA-201ENST00000242285 AGLP35573 1532 aa26.49■■□□□ 1.83
CLTA-201ENST00000242285 ZNF777Q9ULD5 760 aaPredicted RBP26.45■■□□□ 1.82
CLTA-201ENST00000242285 INO80Q9ULG1 1556 aaPredicted RBP26.44■■□□□ 1.82
CLTA-201ENST00000242285 PREX1Q8TCU6 1659 aa26.44■■□□□ 1.82
CLTA-201ENST00000242285 MYT1LQ9UL68 1186 aa26.43■■□□□ 1.82
CLTA-201ENST00000242285 HSPA2P54652 639 aa26.42■■□□□ 1.82
CLTA-201ENST00000242285 ATP7AQ04656 1500 aa26.4■■□□□ 1.82
CLTA-201ENST00000242285 MBD5Q9P267 1494 aa26.4■■□□□ 1.82
CLTA-201ENST00000242285 PLPPR3Q6T4P5 718 aa26.39■■□□□ 1.82
CLTA-201ENST00000242285 HNRNPMP52272 730 aaKnown RBP eCLIP26.38■■□□□ 1.81
CLTA-201ENST00000242285 CAMSAP2Q08AD1 1489 aa26.37■■□□□ 1.81
CLTA-201ENST00000242285 ADGBQ8N7X0 1667 aa26.37■■□□□ 1.81
CLTA-201ENST00000242285 CNTLNQ9NXG0 1405 aa26.36■■□□□ 1.81
CLTA-201ENST00000242285 SPAG9O60271 1321 aaKnown RBP26.36■■□□□ 1.81
CLTA-201ENST00000242285 ARHGEF5Q12774 1597 aa26.35■■□□□ 1.81
CLTA-201ENST00000242285 KANK4Q5T7N3 995 aaPredicted RBP26.35■■□□□ 1.81
CLTA-201ENST00000242285 UHRF1BP1Q6BDS2 1440 aa26.35■■□□□ 1.81
CLTA-201ENST00000242285 APLP2Q06481 763 aa26.34■■□□□ 1.81
CLTA-201ENST00000242285 ZNF644Q9H582 1327 aaPredicted RBP26.33■■□□□ 1.81
CLTA-201ENST00000242285 RTEL1-TNFRSF6BF6WH68 1400 aa26.32■■□□□ 1.8
CLTA-201ENST00000242285 MIA2Q96PC5 1412 aa26.32■■□□□ 1.8
CLTA-201ENST00000242285 CEBPAP49715 358 aaPredicted RBP26.32■■□□□ 1.8
CLTA-201ENST00000242285 RSPH4AQ5TD94 716 aa26.32■■□□□ 1.8
CLTA-201ENST00000242285 ESF1Q9H501 851 aaKnown RBP26.32■■□□□ 1.8
CLTA-201ENST00000242285 SETD1BQ9UPS6 1966 aaKnown RBP26.32■■□□□ 1.8
CLTA-201ENST00000242285 PLXNC1O60486 1568 aa26.32■■□□□ 1.8
CLTA-201ENST00000242285 MYOM3Q5VTT5 1437 aa26.31■■□□□ 1.8
CLTA-201ENST00000242285 CCDC141Q6ZP82 1450 aa26.31■■□□□ 1.8
CLTA-201ENST00000242285 DMRT2Q9Y5R5 561 aa26.3■■□□□ 1.8
CLTA-201ENST00000242285 C3P01024 1663 aa26.28■■□□□ 1.8
CLTA-201ENST00000242285 A2MP01023 1474 aa26.24■■□□□ 1.79
CLTA-201ENST00000242285 MROH2AA6NES4 1674 aa26.24■■□□□ 1.79
CLTA-201ENST00000242285 NPATQ14207 1427 aa26.22■■□□□ 1.79
CLTA-201ENST00000242285 MAST1Q9Y2H9 1570 aa26.22■■□□□ 1.79
CLTA-201ENST00000242285 CERKQ8TCT0 537 aa26.22■■□□□ 1.79
CLTA-201ENST00000242285 STRCQ7RTU9 1775 aa26.19■■□□□ 1.78
CLTA-201ENST00000242285 PTPN23Q9H3S7 1636 aa26.18■■□□□ 1.78
CLTA-201ENST00000242285 PTPRTO14522 1441 aa26.18■■□□□ 1.78
CLTA-201ENST00000242285 PPP6R1Q9UPN7 881 aa26.17■■□□□ 1.78
CLTA-201ENST00000242285 CROCC2H7BZ55 1655 aa26.16■■□□□ 1.78
CLTA-201ENST00000242285 ZMYM3Q14202 1370 aa26.14■■□□□ 1.78
CLTA-201ENST00000242285 TCOF1Q13428 1488 aaKnown RBP26.13■■□□□ 1.77
CLTA-201ENST00000242285 DHX29Q7Z478 1369 aaKnown RBP26.13■■□□□ 1.77
CLTA-201ENST00000242285 FGD6Q6ZV73 1430 aa26.13■■□□□ 1.77
CLTA-201ENST00000242285 TSPY4P0CV99 314 aa26.12■■□□□ 1.77
CLTA-201ENST00000242285 TSPY10P0CW01 314 aa26.12■■□□□ 1.77
CLTA-201ENST00000242285 NCOA1Q15788 1441 aa26.1■■□□□ 1.77
CLTA-201ENST00000242285 SHANK2Q9UPX8 1470 aa26.1■■□□□ 1.77
CLTA-201ENST00000242285 DNMT1P26358 1616 aaKnown RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms