RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CALD1Q05682 793 aaKnown RBP10.34□□□□□ -0.75
APOB-201ENST00000233242 MTERF4Q7Z6M4 381 aaKnown RBP10.34□□□□□ -0.75
APOB-201ENST00000233242 VSIG10Q8N0Z9 540 aa10.34□□□□□ -0.75
APOB-201ENST00000233242 RB1CC1Q8TDY2 1594 aa10.34□□□□□ -0.75
APOB-201ENST00000233242 PLEKHD1A6NEE1 506 aa10.33□□□□□ -0.76
APOB-201ENST00000233242 CFDP1Q9UEE9 299 aaPredicted RBP10.33□□□□□ -0.76
APOB-201ENST00000233242 NPM1P06748 294 aaKnown RBP eCLIP10.33□□□□□ -0.76
APOB-201ENST00000233242 TPM4P67936 248 aa10.33□□□□□ -0.76
APOB-201ENST00000233242 TPRNQ4KMQ1 711 aa10.33□□□□□ -0.76
APOB-201ENST00000233242 KIAA1211Q6ZU35 1233 aa10.33□□□□□ -0.76
APOB-201ENST00000233242 NEUROD2Q15784 382 aa10.32□□□□□ -0.76
APOB-201ENST00000233242 HSPA5P11021 654 aaKnown RBP10.32□□□□□ -0.76
APOB-201ENST00000233242 OS9Q13438 667 aaPredicted RBP10.32□□□□□ -0.76
APOB-201ENST00000233242 RGL3Q3MIN7 710 aa10.31□□□□□ -0.76
APOB-201ENST00000233242 MAP7D2Q96T17 732 aa10.31□□□□□ -0.76
APOB-201ENST00000233242 CC2D1BQ5T0F9 858 aaKnown RBP10.31□□□□□ -0.76
APOB-201ENST00000233242 CCDC34Q96HJ3 373 aa10.31□□□□□ -0.76
APOB-201ENST00000233242 SPRYD3Q8NCJ5 442 aa10.31□□□□□ -0.76
APOB-201ENST00000233242 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.3□□□□□ -0.76
APOB-201ENST00000233242 SETQ01105 290 aaPredicted RBP10.29□□□□□ -0.76
APOB-201ENST00000233242 FAM161AQ3B820 660 aa10.29□□□□□ -0.76
APOB-201ENST00000233242 CENPQQ7L2Z9 268 aaPredicted RBP10.29□□□□□ -0.76
APOB-201ENST00000233242 CHMP4AQ9BY43 222 aa10.29□□□□□ -0.76
APOB-201ENST00000233242 ZBED9Q6R2W3 1325 aa10.28□□□□□ -0.76
APOB-201ENST00000233242 ST18O60284 1047 aa10.28□□□□□ -0.76
APOB-201ENST00000233242 NLRP13Q86W25 1043 aa10.27□□□□□ -0.76
APOB-201ENST00000233242 ARHGAP35Q9NRY4 1499 aa10.27□□□□□ -0.76
APOB-201ENST00000233242 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
APOB-201ENST00000233242 PPP1R15AO75807 674 aaPredicted RBP10.26□□□□□ -0.77
APOB-201ENST00000233242 PDE4AP27815 886 aa10.26□□□□□ -0.77
APOB-201ENST00000233242 SENP3-EIF4A1A0A087X0R7 540 aa10.25□□□□□ -0.77
APOB-201ENST00000233242 ATP6V1DQ9Y5K8 247 aa10.25□□□□□ -0.77
APOB-201ENST00000233242 ARID3AQ99856 593 aa10.25□□□□□ -0.77
APOB-201ENST00000233242 GPS2Q13227 327 aa10.25□□□□□ -0.77
APOB-201ENST00000233242 MORC1Q86VD1 984 aa10.25□□□□□ -0.77
APOB-201ENST00000233242 HMMRO75330 724 aa10.24□□□□□ -0.77
APOB-201ENST00000233242 KIF16BQ96L93 1317 aa10.24□□□□□ -0.77
APOB-201ENST00000233242 MFAP1P55081 439 aaKnown RBP10.24□□□□□ -0.77
APOB-201ENST00000233242 TEX35Q5T0J7 233 aa10.24□□□□□ -0.77
APOB-201ENST00000233242 U2SURPO15042 1029 aaKnown RBP10.24□□□□□ -0.77
APOB-201ENST00000233242 HDAC5Q9UQL6 1122 aa10.24□□□□□ -0.77
APOB-201ENST00000233242 GNL2Q13823 731 aaKnown RBP10.24□□□□□ -0.77
APOB-201ENST00000233242 FAM43AQ8N2R8 423 aa10.23□□□□□ -0.77
APOB-201ENST00000233242 RAB3GAP2Q9H2M9 1393 aa10.23□□□□□ -0.77
APOB-201ENST00000233242 NAP1L2Q9ULW6 460 aaPredicted RBP10.23□□□□□ -0.77
APOB-201ENST00000233242 KIF3AQ9Y496 699 aa10.23□□□□□ -0.77
APOB-201ENST00000233242 GOLGA2Q08379 1002 aa10.23□□□□□ -0.77
APOB-201ENST00000233242 ITPRIPQ8IWB1 547 aa10.23□□□□□ -0.77
APOB-201ENST00000233242 NOC3LQ8WTT2 800 aaKnown RBP10.23□□□□□ -0.77
APOB-201ENST00000233242 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
APOB-201ENST00000233242 EIF3AQ14152 1382 aaKnown RBP10.22□□□□□ -0.77
APOB-201ENST00000233242 CHMP4CQ96CF2 233 aa10.22□□□□□ -0.77
APOB-201ENST00000233242 DCAF11Q8TEB1 546 aa10.22□□□□□ -0.77
APOB-201ENST00000233242 GPATCH3Q96I76 525 aa10.21□□□□□ -0.77
APOB-201ENST00000233242 KIF15Q9NS87 1388 aa10.21□□□□□ -0.77
APOB-201ENST00000233242 CENPJQ9HC77 1338 aaPredicted RBP10.21□□□□□ -0.77
APOB-201ENST00000233242 TPM2P07951 284 aa10.21□□□□□ -0.78
APOB-201ENST00000233242 NGEFQ8N5V2 710 aa10.21□□□□□ -0.78
APOB-201ENST00000233242 CGNL1Q0VF96 1302 aa10.21□□□□□ -0.78
APOB-201ENST00000233242 A0A0U1RQG5 324 aaPredicted RBP10.2□□□□□ -0.78
APOB-201ENST00000233242 AAMPQ13685 434 aa10.2□□□□□ -0.78
APOB-201ENST00000233242 POGKQ9P215 609 aa10.2□□□□□ -0.78
APOB-201ENST00000233242 ZNF771Q7L3S4 317 aaPredicted RBP10.2□□□□□ -0.78
APOB-201ENST00000233242 TPM3P06753 285 aa10.2□□□□□ -0.78
APOB-201ENST00000233242 KANK1Q14678 1352 aa10.2□□□□□ -0.78
APOB-201ENST00000233242 DDX49Q9Y6V7 483 aaKnown RBP10.2□□□□□ -0.78
APOB-201ENST00000233242 FMN1Q68DA7 1419 aa10.2□□□□□ -0.78
APOB-201ENST00000233242 RRP1P56182 461 aaKnown RBP10.18□□□□□ -0.78
APOB-201ENST00000233242 MRE11P49959 708 aa10.18□□□□□ -0.78
APOB-201ENST00000233242 CHMP5Q9NZZ3 219 aa10.18□□□□□ -0.78
APOB-201ENST00000233242 NOM1Q5C9Z4 860 aaKnown RBP10.18□□□□□ -0.78
APOB-201ENST00000233242 ISY1Q9ULR0 285 aaKnown RBP10.18□□□□□ -0.78
APOB-201ENST00000233242 PKNOX2Q96KN3 472 aa10.17□□□□□ -0.78
APOB-201ENST00000233242 C14orf37Q86TY3 774 aa10.17□□□□□ -0.78
APOB-201ENST00000233242 BAZ1AQ9NRL2 1556 aaPredicted RBP10.17□□□□□ -0.78
APOB-201ENST00000233242 MYBBP1AQ9BQG0 1328 aaKnown RBP10.17□□□□□ -0.78
APOB-201ENST00000233242 FAM13BQ9NYF5 915 aa10.17□□□□□ -0.78
APOB-201ENST00000233242 BAZ1BQ9UIG0 1483 aaKnown RBP10.16□□□□□ -0.78
APOB-201ENST00000233242 CALRP27797 417 aaKnown RBP10.16□□□□□ -0.78
APOB-201ENST00000233242 CCDC70Q6NSX1 233 aa10.16□□□□□ -0.78
APOB-201ENST00000233242 SMC4Q9NTJ3 1288 aa10.15□□□□□ -0.78
APOB-201ENST00000233242 CCDC66A2RUB6 948 aa10.15□□□□□ -0.78
APOB-201ENST00000233242 HMGN5P82970 282 aaKnown RBP10.15□□□□□ -0.78
APOB-201ENST00000233242 DIAPH3Q9NSV4 1193 aa10.15□□□□□ -0.78
APOB-201ENST00000233242 LMOD3Q0VAK6 560 aa10.15□□□□□ -0.79
APOB-201ENST00000233242 RTF1Q92541 710 aaKnown RBP10.14□□□□□ -0.79
APOB-201ENST00000233242 GOLGA6L19H0YKK7 550 aa10.14□□□□□ -0.79
APOB-201ENST00000233242 U2AF1L5P0DN76 240 aaPredicted RBP10.14□□□□□ -0.79
APOB-201ENST00000233242 U2AF1Q01081 240 aaKnown RBP eCLIP10.14□□□□□ -0.791e-10■□□□□ 10.4
APOB-201ENST00000233242 ARGLU1Q9NWB6 273 aaPredicted RBP10.14□□□□□ -0.79
APOB-201ENST00000233242 CCDC39Q9UFE4 941 aa10.14□□□□□ -0.79
APOB-201ENST00000233242 NUCB2P80303 420 aa10.13□□□□□ -0.79
APOB-201ENST00000233242 NACADO15069 1562 aa10.13□□□□□ -0.79
APOB-201ENST00000233242 REC8O95072 547 aa10.13□□□□□ -0.79
APOB-201ENST00000233242 CWC15Q9P013 229 aaKnown RBP10.13□□□□□ -0.79
APOB-201ENST00000233242 MPHOSPH9Q99550 1183 aa10.13□□□□□ -0.79
APOB-201ENST00000233242 RRP9O43818 475 aaKnown RBP10.13□□□□□ -0.79
APOB-201ENST00000233242 PKD2Q13563 968 aa10.13□□□□□ -0.79
APOB-201ENST00000233242 CARMIL1Q5VZK9 1371 aa10.13□□□□□ -0.79
APOB-201ENST00000233242 ZBTB7CA1YPR0 619 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms