RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 GPATCH8Q9UKJ3 1502 aaKnown RBP19.25■□□□□ 0.67
USP5-201ENST00000229268 ABCC5O15440 1437 aa19.25■□□□□ 0.67
USP5-201ENST00000229268 MPHOSPH9Q99550 1183 aa19.25■□□□□ 0.67
USP5-201ENST00000229268 TSPY4P0CV99 314 aa19.24■□□□□ 0.67
USP5-201ENST00000229268 TSPY10P0CW01 314 aa19.24■□□□□ 0.67
USP5-201ENST00000229268 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
USP5-201ENST00000229268 DAPK1P53355 1430 aa19.24■□□□□ 0.67
USP5-201ENST00000229268 ABCA8O94911 1581 aa19.21■□□□□ 0.67
USP5-201ENST00000229268 OSCARQ8IYS5 282 aa19.21■□□□□ 0.67
USP5-201ENST00000229268 TCOF1Q13428 1488 aaKnown RBP19.2■□□□□ 0.66
USP5-201ENST00000229268 CAMSAP2Q08AD1 1489 aa19.19■□□□□ 0.66
USP5-201ENST00000229268 MYT1LQ9UL68 1186 aa19.19■□□□□ 0.66
USP5-201ENST00000229268 KDM6BO15054 1643 aa19.18■□□□□ 0.66
USP5-201ENST00000229268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.18■□□□□ 0.664e-6■■■□□ 16.8
USP5-201ENST00000229268 PPP1R15AO75807 674 aaPredicted RBP19.16■□□□□ 0.66
USP5-201ENST00000229268 ZNF326Q5BKZ1 582 aaKnown RBP19.15■□□□□ 0.66
USP5-201ENST00000229268 DDX10Q13206 875 aaKnown RBP19.12■□□□□ 0.65
USP5-201ENST00000229268 PKD2Q13563 968 aa19.09■□□□□ 0.65
USP5-201ENST00000229268 ANKRD30AQ9BXX3 1397 aa19.09■□□□□ 0.65
USP5-201ENST00000229268 NCOA1Q15788 1441 aa19.08■□□□□ 0.65
USP5-201ENST00000229268 AKNAQ7Z591 1439 aa19.08■□□□□ 0.64
USP5-201ENST00000229268 L3MBTL2Q969R5 705 aa19.07■□□□□ 0.64
USP5-201ENST00000229268 ABCC10Q5T3U5 1492 aa19.07■□□□□ 0.64
USP5-201ENST00000229268 NPM1P06748 294 aaKnown RBP eCLIP19.07■□□□□ 0.64
USP5-201ENST00000229268 NUP155O75694 1391 aa19.05■□□□□ 0.64
USP5-201ENST00000229268 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
USP5-201ENST00000229268 C9orf84Q5VXU9 1444 aa19.04■□□□□ 0.64
USP5-201ENST00000229268 AFAP1Q8N556 730 aa19.04■□□□□ 0.64
USP5-201ENST00000229268 ABCC2Q92887 1545 aa19.04■□□□□ 0.64
USP5-201ENST00000229268 ROCK1Q13464 1354 aa19.03■□□□□ 0.64
USP5-201ENST00000229268 DNMT1P26358 1616 aaKnown RBP19.03■□□□□ 0.64
USP5-201ENST00000229268 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
USP5-201ENST00000229268 CLASP1Q7Z460 1538 aa19.03■□□□□ 0.64
USP5-201ENST00000229268 ANKRD50Q9ULJ7 1429 aa19.03■□□□□ 0.64
USP5-201ENST00000229268 EFCAB2Q5VUJ9 269 aa19.02■□□□□ 0.64
USP5-201ENST00000229268 CYB5RLQ6IPT4 315 aa19.02■□□□□ 0.64
USP5-201ENST00000229268 KIF15Q9NS87 1388 aa19.02■□□□□ 0.63
USP5-201ENST00000229268 KDM2AQ9Y2K7 1162 aa19■□□□□ 0.63
USP5-201ENST00000229268 DENND4BO75064 1496 aaPredicted RBP19■□□□□ 0.63
USP5-201ENST00000229268 CDC42BPAQ5VT25 1732 aa18.99■□□□□ 0.63
USP5-201ENST00000229268 TIMELESSQ9UNS1 1208 aa18.99■□□□□ 0.63
USP5-201ENST00000229268 ITSN2Q9NZM3 1697 aa18.99■□□□□ 0.63
USP5-201ENST00000229268 CNGB1Q14028 1251 aaPredicted RBP18.98■□□□□ 0.63
USP5-201ENST00000229268 TTC37Q6PGP7 1564 aa18.97■□□□□ 0.63
USP5-201ENST00000229268 POLR3GLQ9BT43 218 aa18.96■□□□□ 0.63
USP5-201ENST00000229268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.96■□□□□ 0.635e-6■■■■□ 19.7
USP5-201ENST00000229268 RGL3Q3MIN7 710 aa18.95■□□□□ 0.62
USP5-201ENST00000229268 ADCY10Q96PN6 1610 aa18.94■□□□□ 0.62
USP5-201ENST00000229268 SYCP2Q9BX26 1530 aa18.94■□□□□ 0.62
USP5-201ENST00000229268 GCC2Q8IWJ2 1684 aa18.93■□□□□ 0.62
USP5-201ENST00000229268 ANKRD30BQ9BXX2 1392 aa18.92■□□□□ 0.62
USP5-201ENST00000229268 MBD5Q9P267 1494 aa18.92■□□□□ 0.62
USP5-201ENST00000229268 NBPF8Q3BBV2 869 aa18.92■□□□□ 0.62
USP5-201ENST00000229268 ZCCHC11Q5TAX3 1644 aaKnown RBP18.9■□□□□ 0.62
USP5-201ENST00000229268 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
USP5-201ENST00000229268 HSPA5P11021 654 aaKnown RBP18.9■□□□□ 0.62
USP5-201ENST00000229268 SAMD9LQ8IVG5 1584 aa18.9■□□□□ 0.62
USP5-201ENST00000229268 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
USP5-201ENST00000229268 RSPH4AQ5TD94 716 aa18.89■□□□□ 0.61
USP5-201ENST00000229268 SPAG9O60271 1321 aaKnown RBP18.89■□□□□ 0.61
USP5-201ENST00000229268 KDM5BQ9UGL1 1544 aa18.88■□□□□ 0.61
USP5-201ENST00000229268 CDC42BPBQ9Y5S2 1711 aa18.88■□□□□ 0.61
USP5-201ENST00000229268 PZPP20742 1482 aa18.87■□□□□ 0.61
USP5-201ENST00000229268 TRAPPC8Q9Y2L5 1435 aa18.87■□□□□ 0.61
USP5-201ENST00000229268 PLCH2O75038 1416 aa18.86■□□□□ 0.61
USP5-201ENST00000229268 ASXL2Q76L83 1435 aa18.86■□□□□ 0.61
USP5-201ENST00000229268 ARHGEF12Q9NZN5 1544 aa18.86■□□□□ 0.61
USP5-201ENST00000229268 DCAF11Q8TEB1 546 aa18.85■□□□□ 0.61
USP5-201ENST00000229268 EIF4G2P78344 907 aaKnown RBP eCLIP18.85■□□□□ 0.61
USP5-201ENST00000229268 ACIN1Q9UKV3 1341 aaKnown RBP18.85■□□□□ 0.61
USP5-201ENST00000229268 ADGRL2O95490 1459 aa18.83■□□□□ 0.6
USP5-201ENST00000229268 PLEKHH2Q8IVE3 1493 aa18.83■□□□□ 0.6
USP5-201ENST00000229268 UHRF1BP1LA0JNW5 1464 aa18.82■□□□□ 0.6
USP5-201ENST00000229268 WDR7Q9Y4E6 1490 aa18.82■□□□□ 0.6
USP5-201ENST00000229268 KIAA1107Q9UPP5 1409 aa18.82■□□□□ 0.6
USP5-201ENST00000229268 PREX2Q70Z35 1606 aa18.82■□□□□ 0.6
USP5-201ENST00000229268 KIF3BO15066 747 aa18.81■□□□□ 0.6
USP5-201ENST00000229268 SCAPERQ9BY12 1400 aa18.8■□□□□ 0.6
USP5-201ENST00000229268 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
USP5-201ENST00000229268 RPRD2Q5VT52 1461 aaKnown RBP18.78■□□□□ 0.6
USP5-201ENST00000229268 FANCAO15360 1455 aa18.77■□□□□ 0.6
USP5-201ENST00000229268 ADGBQ8N7X0 1667 aa18.77■□□□□ 0.6
USP5-201ENST00000229268 RAPGEF3O95398 923 aa18.77■□□□□ 0.59
USP5-201ENST00000229268 MYO5CQ9NQX4 1742 aa18.76■□□□□ 0.59
USP5-201ENST00000229268 C11orf95C9JLR9 678 aaPredicted RBP18.76■□□□□ 0.59
USP5-201ENST00000229268 SHANK2Q9UPX8 1470 aa18.76■□□□□ 0.59
USP5-201ENST00000229268 CROCC2H7BZ55 1655 aa18.76■□□□□ 0.59
USP5-201ENST00000229268 ANP32CO43423 234 aa18.75■□□□□ 0.59
USP5-201ENST00000229268 GGT6Q6P531 493 aa18.73■□□□□ 0.59
USP5-201ENST00000229268 SENP3Q9H4L4 574 aaPredicted RBP18.73■□□□□ 0.59
USP5-201ENST00000229268 WASHC2AQ641Q2 1341 aa18.73■□□□□ 0.59
USP5-201ENST00000229268 ARHGEF5Q12774 1597 aa18.72■□□□□ 0.59
USP5-201ENST00000229268 CARD11Q9BXL7 1154 aa18.71■□□□□ 0.59
USP5-201ENST00000229268 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
USP5-201ENST00000229268 CD109Q6YHK3 1445 aa18.7■□□□□ 0.58
USP5-201ENST00000229268 FAM69CQ0P6D2 419 aa18.67■□□□□ 0.58
USP5-201ENST00000229268 CCDC144AA2RUR9 1427 aa18.67■□□□□ 0.58
USP5-201ENST00000229268 FAM135AQ9P2D6 1515 aa18.67■□□□□ 0.58
USP5-201ENST00000229268 CHGAP10645 457 aaKnown RBP18.67■□□□□ 0.58
USP5-201ENST00000229268 TEX14Q8IWB6 1497 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms