RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 ADAMTSL3P82987 1691 aa16.34■□□□□ 0.21
CDCA3-201ENST00000229265 MYO5CQ9NQX4 1742 aa16.33■□□□□ 0.21
CDCA3-201ENST00000229265 ARHGEF40Q8TER5 1519 aa16.31■□□□□ 0.2
CDCA3-201ENST00000229265 CDC42BPAQ5VT25 1732 aa16.31■□□□□ 0.2
CDCA3-201ENST00000229265 DENND4BO75064 1496 aaPredicted RBP16.3■□□□□ 0.2
CDCA3-201ENST00000229265 ZMYM4Q5VZL5 1548 aa16.29■□□□□ 0.2
CDCA3-201ENST00000229265 BCORL1Q5H9F3 1711 aa16.29■□□□□ 0.2
CDCA3-201ENST00000229265 MADDQ8WXG6 1647 aa16.28■□□□□ 0.2
CDCA3-201ENST00000229265 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
CDCA3-201ENST00000229265 SCAPERQ9BY12 1400 aa16.28■□□□□ 0.2
CDCA3-201ENST00000229265 PREX2Q70Z35 1606 aa16.27■□□□□ 0.2
CDCA3-201ENST00000229265 POGZQ7Z3K3 1410 aa16.27■□□□□ 0.19
CDCA3-201ENST00000229265 CFAP74Q9C0B2 1584 aa16.26■□□□□ 0.19
CDCA3-201ENST00000229265 HECW2Q9P2P5 1572 aa16.26■□□□□ 0.19
CDCA3-201ENST00000229265 TRAPPC8Q9Y2L5 1435 aa16.25■□□□□ 0.19
CDCA3-201ENST00000229265 PHLDB1Q86UU1 1377 aa16.25■□□□□ 0.19
CDCA3-201ENST00000229265 SAMD9LQ8IVG5 1584 aa16.23■□□□□ 0.19
CDCA3-201ENST00000229265 AFAP1Q8N556 730 aa16.23■□□□□ 0.19
CDCA3-201ENST00000229265 ARHGAP5Q13017 1502 aa16.23■□□□□ 0.19
CDCA3-201ENST00000229265 MAP3K1Q13233 1512 aa16.23■□□□□ 0.19
CDCA3-201ENST00000229265 ZFYVE16Q7Z3T8 1539 aa16.23■□□□□ 0.19
CDCA3-201ENST00000229265 CCDC18Q5T9S5 1454 aa16.22■□□□□ 0.19
CDCA3-201ENST00000229265 KDM5CP41229 1560 aa16.21■□□□□ 0.19
CDCA3-201ENST00000229265 RIMS1Q86UR5 1692 aaKnown RBP16.21■□□□□ 0.19
CDCA3-201ENST00000229265 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.19
CDCA3-201ENST00000229265 ABCC1P33527 1531 aa16.21■□□□□ 0.19
CDCA3-201ENST00000229265 ABCA6Q8N139 1617 aa16.21■□□□□ 0.19
CDCA3-201ENST00000229265 GPATCH8Q9UKJ3 1502 aaKnown RBP16.2■□□□□ 0.18
CDCA3-201ENST00000229265 PTPRMP28827 1452 aa16.2■□□□□ 0.18
CDCA3-201ENST00000229265 DIP2CQ9Y2E4 1556 aa16.19■□□□□ 0.18
CDCA3-201ENST00000229265 KIDINS220Q9ULH0 1771 aa16.17■□□□□ 0.18
CDCA3-201ENST00000229265 TIAM1Q13009 1591 aa16.17■□□□□ 0.18
CDCA3-201ENST00000229265 ZNF644Q9H582 1327 aaPredicted RBP16.17■□□□□ 0.18
CDCA3-201ENST00000229265 EFCAB2Q5VUJ9 269 aa16.16■□□□□ 0.18
CDCA3-201ENST00000229265 PPARGC1BQ86YN6 1023 aaKnown RBP16.15■□□□□ 0.18
CDCA3-201ENST00000229265 SYCP2Q9BX26 1530 aa16.14■□□□□ 0.18
CDCA3-201ENST00000229265 MLECQ14165 292 aa16.13■□□□□ 0.17
CDCA3-201ENST00000229265 ARID4BQ4LE39 1312 aaPredicted RBP16.12■□□□□ 0.17
CDCA3-201ENST00000229265 ATP10AO60312 1499 aa16.11■□□□□ 0.17
CDCA3-201ENST00000229265 HNRNPMP52272 730 aaKnown RBP eCLIP16.11■□□□□ 0.17
CDCA3-201ENST00000229265 CDK11AQ9UQ88 783 aaPredicted RBP16.11■□□□□ 0.17
CDCA3-201ENST00000229265 FER1L4A9Z1Z3 1794 aa16.1■□□□□ 0.17
CDCA3-201ENST00000229265 ZNF518AQ6AHZ1 1483 aa16.1■□□□□ 0.17
CDCA3-201ENST00000229265 MAGI2Q86UL8 1455 aa16.1■□□□□ 0.17
CDCA3-201ENST00000229265 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
CDCA3-201ENST00000229265 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
CDCA3-201ENST00000229265 LMTK3Q96Q04 1460 aa16.09■□□□□ 0.17
CDCA3-201ENST00000229265 ZNF777Q9ULD5 760 aaPredicted RBP16.08■□□□□ 0.16
CDCA3-201ENST00000229265 C9orf84Q5VXU9 1444 aa16.08■□□□□ 0.16
CDCA3-201ENST00000229265 CEBPAP49715 358 aaPredicted RBP16.07■□□□□ 0.16
CDCA3-201ENST00000229265 MLH3Q9UHC1 1453 aa16.07■□□□□ 0.16
CDCA3-201ENST00000229265 EHBP1L1Q8N3D4 1523 aa16.06■□□□□ 0.16
CDCA3-201ENST00000229265 INO80Q9ULG1 1556 aaPredicted RBP16.05■□□□□ 0.16
CDCA3-201ENST00000229265 MBD5Q9P267 1494 aa16.05■□□□□ 0.16
CDCA3-201ENST00000229265 NCOA2Q15596 1464 aa16.04■□□□□ 0.16
CDCA3-201ENST00000229265 MTUS2Q5JR59 1369 aa16.04■□□□□ 0.16
CDCA3-201ENST00000229265 REREQ9P2R6 1566 aa16.03■□□□□ 0.16
CDCA3-201ENST00000229265 HSPA2P54652 639 aa16.02■□□□□ 0.16
CDCA3-201ENST00000229265 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.15
CDCA3-201ENST00000229265 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
CDCA3-201ENST00000229265 C3P01024 1663 aa16■□□□□ 0.15
CDCA3-201ENST00000229265 RRBP1Q9P2E9 1410 aaKnown RBP16■□□□□ 0.15
CDCA3-201ENST00000229265 PLXNC1O60486 1568 aa16■□□□□ 0.15
CDCA3-201ENST00000229265 ATP7AQ04656 1500 aa15.99■□□□□ 0.15
CDCA3-201ENST00000229265 LRRC9Q6ZRR7 1453 aa15.99■□□□□ 0.15
CDCA3-201ENST00000229265 CFDP1Q9UEE9 299 aaPredicted RBP15.99■□□□□ 0.15
CDCA3-201ENST00000229265 ADGBQ8N7X0 1667 aa15.99■□□□□ 0.15
CDCA3-201ENST00000229265 AGLP35573 1532 aa15.98■□□□□ 0.15
CDCA3-201ENST00000229265 KIAA1107Q9UPP5 1409 aa15.97■□□□□ 0.15
CDCA3-201ENST00000229265 CAMSAP2Q08AD1 1489 aa15.97■□□□□ 0.15
CDCA3-201ENST00000229265 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.96■□□□□ 0.15
CDCA3-201ENST00000229265 CCER1Q8TC90 406 aaPredicted RBP15.95■□□□□ 0.14
CDCA3-201ENST00000229265 SPAG9O60271 1321 aaKnown RBP15.93■□□□□ 0.14
CDCA3-201ENST00000229265 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
CDCA3-201ENST00000229265 STRCQ7RTU9 1775 aa15.92■□□□□ 0.14
CDCA3-201ENST00000229265 MYT1LQ9UL68 1186 aa15.92■□□□□ 0.14
CDCA3-201ENST00000229265 CLTCQ00610 1675 aaKnown RBP15.92■□□□□ 0.14
CDCA3-201ENST00000229265 ILDR1Q86SU0 546 aaPredicted RBP15.91■□□□□ 0.14
CDCA3-201ENST00000229265 A2MP01023 1474 aa15.91■□□□□ 0.14
CDCA3-201ENST00000229265 PREX1Q8TCU6 1659 aa15.89■□□□□ 0.13
CDCA3-201ENST00000229265 PLEKHH2Q8IVE3 1493 aa15.87■□□□□ 0.13
CDCA3-201ENST00000229265 ARHGEF5Q12774 1597 aa15.86■□□□□ 0.13
CDCA3-201ENST00000229265 CCDC141Q6ZP82 1450 aa15.85■□□□□ 0.13
CDCA3-201ENST00000229265 MROH1Q8NDA8 1641 aa15.83■□□□□ 0.13
CDCA3-201ENST00000229265 MROH2AA6NES4 1674 aa15.83■□□□□ 0.13
CDCA3-201ENST00000229265 MYOM3Q5VTT5 1437 aa15.83■□□□□ 0.12
CDCA3-201ENST00000229265 ACIN1Q9UKV3 1341 aaKnown RBP15.82■□□□□ 0.12
CDCA3-201ENST00000229265 RTEL1-TNFRSF6BF6WH68 1400 aa15.81■□□□□ 0.12
CDCA3-201ENST00000229265 ZMYM3Q14202 1370 aa15.81■□□□□ 0.12
CDCA3-201ENST00000229265 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
CDCA3-201ENST00000229265 DHX29Q7Z478 1369 aaKnown RBP15.8■□□□□ 0.12
CDCA3-201ENST00000229265 GGT6Q6P531 493 aa15.8■□□□□ 0.12
CDCA3-201ENST00000229265 CROCC2H7BZ55 1655 aa15.79■□□□□ 0.12
CDCA3-201ENST00000229265 PTPN23Q9H3S7 1636 aa15.79■□□□□ 0.12
CDCA3-201ENST00000229265 MAST1Q9Y2H9 1570 aa15.79■□□□□ 0.12
CDCA3-201ENST00000229265 ABCC5O15440 1437 aa15.79■□□□□ 0.12
CDCA3-201ENST00000229265 FBXO31Q5XUX0 539 aaPredicted RBP15.78■□□□□ 0.12
CDCA3-201ENST00000229265 MYO3AQ8NEV4 1616 aa15.78■□□□□ 0.12
CDCA3-201ENST00000229265 SETD1BQ9UPS6 1966 aaKnown RBP15.76■□□□□ 0.11
CDCA3-201ENST00000229265 TCOF1Q13428 1488 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms