RNA–Protein interactions for RNA: ENST00000224721.10

CDH23-201, Transcript of cadherin related 23, humanhuman

APPRIS P5 TSL 5 BASIC

Gene CDH23, Length 11,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-201ENST00000224721 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
CDH23-201ENST00000224721 NPM1P06748 294 aaKnown RBP eCLIP18.19■□□□□ 0.5
CDH23-201ENST00000224721 NPHP1O15259 732 aa18.17■□□□□ 0.5
CDH23-201ENST00000224721 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
CDH23-201ENST00000224721 U2SURPO15042 1029 aaKnown RBP18.14■□□□□ 0.49
CDH23-201ENST00000224721 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
CDH23-201ENST00000224721 CSPP1Q1MSJ5 1256 aa18.13■□□□□ 0.49
CDH23-201ENST00000224721 ZNF771Q7L3S4 317 aaPredicted RBP18.12■□□□□ 0.49
CDH23-201ENST00000224721 DDX11L8A8MPP1 907 aa18.11■□□□□ 0.49
CDH23-201ENST00000224721 HAP1P54257 671 aaPredicted RBP18.11■□□□□ 0.49
CDH23-201ENST00000224721 EEA1Q15075 1411 aa18.11■□□□□ 0.49
CDH23-201ENST00000224721 TSHZ2Q9NRE2 1034 aa18.1■□□□□ 0.49
CDH23-201ENST00000224721 CALD1Q05682 793 aaKnown RBP18.1■□□□□ 0.49
CDH23-201ENST00000224721 ISY1Q9ULR0 285 aaKnown RBP18.09■□□□□ 0.49
CDH23-201ENST00000224721 RCAN3Q9UKA8 241 aa18.08■□□□□ 0.49
CDH23-201ENST00000224721 APBB1O00213 710 aa18.08■□□□□ 0.49
CDH23-201ENST00000224721 CCDC34Q96HJ3 373 aa18.08■□□□□ 0.48
CDH23-201ENST00000224721 KTN1Q86UP2 1357 aaKnown RBP18.08■□□□□ 0.48
CDH23-201ENST00000224721 IPO8O15397 1037 aaKnown RBP18.07■□□□□ 0.48
CDH23-201ENST00000224721 RWDD1Q9H446 243 aaPredicted RBP18.06■□□□□ 0.48
CDH23-201ENST00000224721 TPM3P06753 285 aa18.06■□□□□ 0.48
CDH23-201ENST00000224721 MFAP1P55081 439 aaKnown RBP18.06■□□□□ 0.48
CDH23-201ENST00000224721 PDE4CQ08493 712 aa18.05■□□□□ 0.48
CDH23-201ENST00000224721 ITPRIPQ8IWB1 547 aa18.05■□□□□ 0.48
CDH23-201ENST00000224721 GPATCH3Q96I76 525 aa18.04■□□□□ 0.48
CDH23-201ENST00000224721 POGKQ9P215 609 aa18.03■□□□□ 0.48
CDH23-201ENST00000224721 HSP90B1P14625 803 aaKnown RBP18.03■□□□□ 0.48
CDH23-201ENST00000224721 PRM3Q9NNZ6 103 aa18.03■□□□□ 0.48
CDH23-201ENST00000224721 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
CDH23-201ENST00000224721 CCAR2Q8N163 923 aaKnown RBP18.01■□□□□ 0.47
CDH23-201ENST00000224721 GPS2Q13227 327 aa18■□□□□ 0.47
CDH23-201ENST00000224721 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
CDH23-201ENST00000224721 TMF1P82094 1093 aa17.99■□□□□ 0.47
CDH23-201ENST00000224721 TEX35Q5T0J7 233 aa17.99■□□□□ 0.47
CDH23-201ENST00000224721 TIMELESSQ9UNS1 1208 aa17.99■□□□□ 0.47
CDH23-201ENST00000224721 PATL2C9JE40 543 aaKnown RBP17.99■□□□□ 0.47
CDH23-201ENST00000224721 KIF16BQ96L93 1317 aa17.98■□□□□ 0.47
CDH23-201ENST00000224721 FOXD4L1Q9NU39 408 aa17.98■□□□□ 0.47
CDH23-201ENST00000224721 CREBRFQ8IUR6 639 aa17.97■□□□□ 0.47
CDH23-201ENST00000224721 ST18O60284 1047 aa17.96■□□□□ 0.47
CDH23-201ENST00000224721 GSE1Q14687 1217 aa17.96■□□□□ 0.47
CDH23-201ENST00000224721 CCDC70Q6NSX1 233 aa17.96■□□□□ 0.47
CDH23-201ENST00000224721 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
CDH23-201ENST00000224721 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
CDH23-201ENST00000224721 CCNB3Q8WWL7 1395 aa17.95■□□□□ 0.46
CDH23-201ENST00000224721 TRIM6-TRIM34B2RNG4 842 aa17.95■□□□□ 0.46
CDH23-201ENST00000224721 RASSF8Q8NHQ8 419 aa17.94■□□□□ 0.46
CDH23-201ENST00000224721 FAM13BQ9NYF5 915 aa17.94■□□□□ 0.46
CDH23-201ENST00000224721 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.93■□□□□ 0.46
CDH23-201ENST00000224721 CFDP1Q9UEE9 299 aaPredicted RBP17.93■□□□□ 0.46
CDH23-201ENST00000224721 FOXD4L5Q5VV16 416 aaPredicted RBP17.93■□□□□ 0.46
CDH23-201ENST00000224721 FOXD4L4Q8WXT5 416 aaPredicted RBP17.93■□□□□ 0.46
CDH23-201ENST00000224721 LMOD2Q6P5Q4 547 aa17.93■□□□□ 0.46
CDH23-201ENST00000224721 NOM1Q5C9Z4 860 aaKnown RBP17.93■□□□□ 0.46
CDH23-201ENST00000224721 NOL8Q76FK4 1167 aaKnown RBP17.92■□□□□ 0.46
CDH23-201ENST00000224721 SKOR2Q2VWA4 1001 aaPredicted RBP17.91■□□□□ 0.46
CDH23-201ENST00000224721 TSR1Q2NL82 804 aaKnown RBP17.91■□□□□ 0.46
CDH23-201ENST00000224721 RTF1Q92541 710 aaKnown RBP17.91■□□□□ 0.46
CDH23-201ENST00000224721 CEP89Q96ST8 783 aa17.9■□□□□ 0.46
CDH23-201ENST00000224721 GOLGA6L19H0YKK7 550 aa17.9■□□□□ 0.46
CDH23-201ENST00000224721 ZNF592Q92610 1267 aa17.89■□□□□ 0.45
CDH23-201ENST00000224721 CHMP7Q8WUX9 453 aaPredicted RBP17.89■□□□□ 0.45
CDH23-201ENST00000224721 KCNH8Q96L42 1107 aa17.88■□□□□ 0.45
CDH23-201ENST00000224721 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
CDH23-201ENST00000224721 TPM1P09493 284 aa17.88■□□□□ 0.45
CDH23-201ENST00000224721 ARHGAP35Q9NRY4 1499 aa17.87■□□□□ 0.45
CDH23-201ENST00000224721 TNIKQ9UKE5 1360 aa17.87■□□□□ 0.45
CDH23-201ENST00000224721 PES1O00541 588 aaKnown RBP17.87■□□□□ 0.45
CDH23-201ENST00000224721 RALBP1Q15311 655 aa17.87■□□□□ 0.45
CDH23-201ENST00000224721 RRP12Q5JTH9 1297 aaKnown RBP17.86■□□□□ 0.45
CDH23-201ENST00000224721 KANK1Q14678 1352 aa17.86■□□□□ 0.45
CDH23-201ENST00000224721 HMMRO75330 724 aa17.86■□□□□ 0.45
CDH23-201ENST00000224721 SETD5Q9C0A6 1442 aa17.86■□□□□ 0.45
CDH23-201ENST00000224721 DCAF11Q8TEB1 546 aa17.86■□□□□ 0.45
CDH23-201ENST00000224721 TPD52L1Q16890 204 aaPredicted RBP17.85■□□□□ 0.45
CDH23-201ENST00000224721 ROCK2O75116 1388 aaKnown RBP17.85■□□□□ 0.45
CDH23-201ENST00000224721 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
CDH23-201ENST00000224721 ATP6V1DQ9Y5K8 247 aa17.84■□□□□ 0.45
CDH23-201ENST00000224721 KIF3AQ9Y496 699 aa17.84■□□□□ 0.45
CDH23-201ENST00000224721 DDX49Q9Y6V7 483 aaKnown RBP17.84■□□□□ 0.45
CDH23-201ENST00000224721 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
CDH23-201ENST00000224721 H3BQV1 296 aa17.83■□□□□ 0.44
CDH23-201ENST00000224721 IFFO2Q5TF58 517 aa17.83■□□□□ 0.44
CDH23-201ENST00000224721 SF3A1Q15459 793 aaKnown RBP17.83■□□□□ 0.44
CDH23-201ENST00000224721 SRPK2P78362 688 aaKnown RBP17.82■□□□□ 0.44
CDH23-201ENST00000224721 HSPA5P11021 654 aaKnown RBP17.82■□□□□ 0.44
CDH23-201ENST00000224721 SMC4Q9NTJ3 1288 aa17.81■□□□□ 0.44
CDH23-201ENST00000224721 BECN2A8MW95 431 aa17.81■□□□□ 0.44
CDH23-201ENST00000224721 APPP05067 770 aa17.81■□□□□ 0.44
CDH23-201ENST00000224721 PKNOX2Q96KN3 472 aa17.81■□□□□ 0.44
CDH23-201ENST00000224721 EIF3AQ14152 1382 aaKnown RBP17.8■□□□□ 0.44
CDH23-201ENST00000224721 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
CDH23-201ENST00000224721 FAM43AQ8N2R8 423 aa17.8■□□□□ 0.44
CDH23-201ENST00000224721 SOX12O15370 315 aa17.8■□□□□ 0.44
CDH23-201ENST00000224721 GORABQ5T7V8 394 aa17.79■□□□□ 0.44
CDH23-201ENST00000224721 CENPJQ9HC77 1338 aaPredicted RBP17.79■□□□□ 0.44
CDH23-201ENST00000224721 AK7Q96M32 723 aa17.79■□□□□ 0.44
CDH23-201ENST00000224721 PHLDB1Q86UU1 1377 aa17.79■□□□□ 0.44
CDH23-201ENST00000224721 CWC15Q9P013 229 aaKnown RBP17.78■□□□□ 0.44
CDH23-201ENST00000224721 TPM2P07951 284 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms