RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 NACADO15069 1562 aa14.16□□□□□ -0.14
KNOP1-201ENST00000219837 TMX4Q9H1E5 349 aaPredicted RBP14.16□□□□□ -0.14
KNOP1-201ENST00000219837 HDGFL2Q7Z4V5 671 aaPredicted RBP14.16□□□□□ -0.14
KNOP1-201ENST00000219837 APBB1O00213 710 aa14.16□□□□□ -0.14
KNOP1-201ENST00000219837 PPP4R2Q9NY27 417 aa14.15□□□□□ -0.14
KNOP1-201ENST00000219837 GGT6Q6P531 493 aa14.15□□□□□ -0.15
KNOP1-201ENST00000219837 NRDCO43847 1150 aa14.14□□□□□ -0.15
KNOP1-201ENST00000219837 RTN4Q9NQC3 1192 aaKnown RBP14.12□□□□□ -0.15
KNOP1-201ENST00000219837 NOP58Q9Y2X3 529 aaKnown RBP14.12□□□□□ -0.15
KNOP1-201ENST00000219837 TNIKQ9UKE5 1360 aa14.09□□□□□ -0.15
KNOP1-201ENST00000219837 CHMP3Q9Y3E7 222 aa14.09□□□□□ -0.15
KNOP1-201ENST00000219837 KIAA2012Q0VF49 1180 aa14.09□□□□□ -0.15
KNOP1-201ENST00000219837 FHAD1B1AJZ9 1412 aa14.09□□□□□ -0.15
KNOP1-201ENST00000219837 ARHGAP35Q9NRY4 1499 aa14.09□□□□□ -0.15
KNOP1-201ENST00000219837 CHAF1AQ13111 956 aaPredicted RBP14.09□□□□□ -0.15
KNOP1-201ENST00000219837 B4GALNT3Q6L9W6 998 aa14.09□□□□□ -0.15
KNOP1-201ENST00000219837 G3V3G9 751 aa14.08□□□□□ -0.15
KNOP1-201ENST00000219837 DCAF8Q5TAQ9 597 aa14.08□□□□□ -0.15
KNOP1-201ENST00000219837 CUX2O14529 1486 aa14.08□□□□□ -0.16
KNOP1-201ENST00000219837 KIAA1211Q6ZU35 1233 aa14.08□□□□□ -0.16
KNOP1-201ENST00000219837 ROCK2O75116 1388 aaKnown RBP14.07□□□□□ -0.16
KNOP1-201ENST00000219837 KTN1Q86UP2 1357 aaKnown RBP14.06□□□□□ -0.16
KNOP1-201ENST00000219837 ITPRIPQ8IWB1 547 aa14.06□□□□□ -0.16
KNOP1-201ENST00000219837 PRM3Q9NNZ6 103 aa14.05□□□□□ -0.16
KNOP1-201ENST00000219837 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
KNOP1-201ENST00000219837 TAF7LQ5H9L4 462 aa14.05□□□□□ -0.16
KNOP1-201ENST00000219837 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
KNOP1-201ENST00000219837 MSNP26038 577 aaKnown RBP14.05□□□□□ -0.16
KNOP1-201ENST00000219837 FOXD1Q16676 465 aa14.04□□□□□ -0.16
KNOP1-201ENST00000219837 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
KNOP1-201ENST00000219837 CFAP44Q96MT7 982 aa14.04□□□□□ -0.16
KNOP1-201ENST00000219837 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.04□□□□□ -0.16
KNOP1-201ENST00000219837 GORABQ5T7V8 394 aa14.04□□□□□ -0.16
KNOP1-201ENST00000219837 CARMIL1Q5VZK9 1371 aa14.03□□□□□ -0.16
KNOP1-201ENST00000219837 NOC3LQ8WTT2 800 aaKnown RBP14.03□□□□□ -0.16
KNOP1-201ENST00000219837 HSPA5P11021 654 aaKnown RBP14.02□□□□□ -0.16
KNOP1-201ENST00000219837 NUTM2DQ5VT03 806 aaPredicted RBP14.02□□□□□ -0.16
KNOP1-201ENST00000219837 IPO8O15397 1037 aaKnown RBP14.02□□□□□ -0.17
KNOP1-201ENST00000219837 L1TD1Q5T7N2 865 aaKnown RBP14.02□□□□□ -0.17
KNOP1-201ENST00000219837 CALD1Q05682 793 aaKnown RBP14.01□□□□□ -0.17
KNOP1-201ENST00000219837 GPATCH3Q96I76 525 aa14.01□□□□□ -0.17
KNOP1-201ENST00000219837 PKD2Q13563 968 aa14.01□□□□□ -0.17
KNOP1-201ENST00000219837 CARMIL2Q6F5E8 1435 aa14.01□□□□□ -0.17
KNOP1-201ENST00000219837 SPAG9O60271 1321 aaKnown RBP14□□□□□ -0.17
KNOP1-201ENST00000219837 EIF3AQ14152 1382 aaKnown RBP14□□□□□ -0.17
KNOP1-201ENST00000219837 U2AF1L5P0DN76 240 aaPredicted RBP14□□□□□ -0.17
KNOP1-201ENST00000219837 U2AF1Q01081 240 aaKnown RBP eCLIP14□□□□□ -0.17
KNOP1-201ENST00000219837 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
KNOP1-201ENST00000219837 PDE4CQ08493 712 aa13.99□□□□□ -0.17
KNOP1-201ENST00000219837 SETD5Q9C0A6 1442 aa13.98□□□□□ -0.17
KNOP1-201ENST00000219837 TRIM6-TRIM34B2RNG4 842 aa13.97□□□□□ -0.17
KNOP1-201ENST00000219837 EID1Q9Y6B2 187 aa13.97□□□□□ -0.17
KNOP1-201ENST00000219837 VPS53Q5VIR6 699 aa13.96□□□□□ -0.17
KNOP1-201ENST00000219837 STK31Q9BXU1 1019 aa13.96□□□□□ -0.17
KNOP1-201ENST00000219837 TPM4P67936 248 aa13.95□□□□□ -0.18
KNOP1-201ENST00000219837 LTV1Q96GA3 475 aaPredicted RBP13.95□□□□□ -0.18
KNOP1-201ENST00000219837 SLC4A10Q6U841 1118 aa13.94□□□□□ -0.18
KNOP1-201ENST00000219837 CREBRFQ8IUR6 639 aa13.94□□□□□ -0.18
KNOP1-201ENST00000219837 NGDNQ8NEJ9 315 aaKnown RBP13.94□□□□□ -0.18
KNOP1-201ENST00000219837 HTATSF1O43719 755 aaKnown RBP13.93□□□□□ -0.18
KNOP1-201ENST00000219837 RASSF8Q8NHQ8 419 aa13.93□□□□□ -0.18
KNOP1-201ENST00000219837 RWDD1Q9H446 243 aaPredicted RBP13.93□□□□□ -0.18
KNOP1-201ENST00000219837 CCDC146Q8IYE0 955 aa13.93□□□□□ -0.18
KNOP1-201ENST00000219837 PTMSP20962 102 aa13.92□□□□□ -0.18
KNOP1-201ENST00000219837 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.92□□□□□ -0.18
KNOP1-201ENST00000219837 ANO8Q9HCE9 1232 aaPredicted RBP13.92□□□□□ -0.18
KNOP1-201ENST00000219837 FRAT2O75474 233 aaPredicted RBP13.92□□□□□ -0.18
KNOP1-201ENST00000219837 AMPHP49418 695 aa13.92□□□□□ -0.18
KNOP1-201ENST00000219837 NOL8Q76FK4 1167 aaKnown RBP13.91□□□□□ -0.18
KNOP1-201ENST00000219837 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
KNOP1-201ENST00000219837 MFAP1P55081 439 aaKnown RBP13.91□□□□□ -0.18
KNOP1-201ENST00000219837 GBP4Q96PP9 640 aa13.91□□□□□ -0.18
KNOP1-201ENST00000219837 SMC4Q9NTJ3 1288 aa13.91□□□□□ -0.18
KNOP1-201ENST00000219837 NUP155O75694 1391 aa13.9□□□□□ -0.18
KNOP1-201ENST00000219837 NUTM2FA1L443 756 aa13.9□□□□□ -0.18
KNOP1-201ENST00000219837 SOGA1O94964 1423 aa13.9□□□□□ -0.18
KNOP1-201ENST00000219837 TOMM22Q9NS69 142 aa13.9□□□□□ -0.18
KNOP1-201ENST00000219837 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.19
KNOP1-201ENST00000219837 PMFBP1Q8TBY8 1022 aa13.9□□□□□ -0.19
KNOP1-201ENST00000219837 GZF1Q9H116 711 aaPredicted RBP13.9□□□□□ -0.19
KNOP1-201ENST00000219837 ANKRD30AQ9BXX3 1397 aa13.89□□□□□ -0.19
KNOP1-201ENST00000219837 MSH5O43196 834 aa13.89□□□□□ -0.19
KNOP1-201ENST00000219837 A0A0U1RQG5 324 aaPredicted RBP13.89□□□□□ -0.19
KNOP1-201ENST00000219837 KIF3BO15066 747 aa13.89□□□□□ -0.19
KNOP1-201ENST00000219837 RCAN3Q9UKA8 241 aa13.89□□□□□ -0.19
KNOP1-201ENST00000219837 GTF2E1P29083 439 aaPredicted RBP13.88□□□□□ -0.19
KNOP1-201ENST00000219837 MEX3CQ5U5Q3 659 aaKnown RBP13.88□□□□□ -0.19
KNOP1-201ENST00000219837 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
KNOP1-201ENST00000219837 TERF2IPQ9NYB0 399 aa13.88□□□□□ -0.19
KNOP1-201ENST00000219837 MARCH6O60337 910 aa13.88□□□□□ -0.19
KNOP1-201ENST00000219837 EVA1CP58658 441 aa13.88□□□□□ -0.19
KNOP1-201ENST00000219837 RALBP1Q15311 655 aa13.88□□□□□ -0.19
KNOP1-201ENST00000219837 MPHOSPH9Q99550 1183 aa13.87□□□□□ -0.19
KNOP1-201ENST00000219837 ARID3AQ99856 593 aa13.87□□□□□ -0.19
KNOP1-201ENST00000219837 EFCAB2Q5VUJ9 269 aa13.87□□□□□ -0.19
KNOP1-201ENST00000219837 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
KNOP1-201ENST00000219837 SYAP1Q96A49 352 aaPredicted RBP13.86□□□□□ -0.19
KNOP1-201ENST00000219837 PDS5BQ9NTI5 1447 aa13.86□□□□□ -0.19
KNOP1-201ENST00000219837 CCER2I3L3R5 266 aa13.85□□□□□ -0.19
KNOP1-201ENST00000219837 HMMRO75330 724 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms