RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 MAP7D2Q96T17 732 aa13.89□□□□□ -0.19
USP31-201ENST00000219689 RRP9O43818 475 aaKnown RBP13.89□□□□□ -0.19
USP31-201ENST00000219689 CSPP1Q1MSJ5 1256 aa13.89□□□□□ -0.19
USP31-201ENST00000219689 CCAR2Q8N163 923 aaKnown RBP13.89□□□□□ -0.19
USP31-201ENST00000219689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.198e-7■■□□□ 12.9
USP31-201ENST00000219689 TAF7LQ5H9L4 462 aa13.88□□□□□ -0.19
USP31-201ENST00000219689 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
USP31-201ENST00000219689 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
USP31-201ENST00000219689 PDE4AP27815 886 aa13.86□□□□□ -0.19
USP31-201ENST00000219689 KNSTRNQ9Y448 316 aa13.86□□□□□ -0.19
USP31-201ENST00000219689 RRP7BPQ9NSQ0 103 aa13.85□□□□□ -0.19
USP31-201ENST00000219689 CLIP1P30622 1438 aa13.85□□□□□ -0.19
USP31-201ENST00000219689 MTERF4Q7Z6M4 381 aaKnown RBP13.85□□□□□ -0.19
USP31-201ENST00000219689 EEA1Q15075 1411 aa13.84□□□□□ -0.19
USP31-201ENST00000219689 CCDC66A2RUB6 948 aa13.83□□□□□ -0.2
USP31-201ENST00000219689 TPM4P67936 248 aa13.82□□□□□ -0.2
USP31-201ENST00000219689 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
USP31-201ENST00000219689 GPS2Q13227 327 aa13.82□□□□□ -0.2
USP31-201ENST00000219689 NFKBIBQ15653 356 aa13.82□□□□□ -0.2
USP31-201ENST00000219689 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
USP31-201ENST00000219689 ZMYND15Q9H091 742 aa13.81□□□□□ -0.2
USP31-201ENST00000219689 SCRIBQ14160 1630 aa13.81□□□□□ -0.2
USP31-201ENST00000219689 MS4A1P11836 297 aa13.81□□□□□ -0.2
USP31-201ENST00000219689 PRDM10Q9NQV6 1147 aa13.81□□□□□ -0.2
USP31-201ENST00000219689 DDX49Q9Y6V7 483 aaKnown RBP13.81□□□□□ -0.2
USP31-201ENST00000219689 OS9Q13438 667 aaPredicted RBP13.81□□□□□ -0.2
USP31-201ENST00000219689 CLSTN1O94985 981 aa13.8□□□□□ -0.2
USP31-201ENST00000219689 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
USP31-201ENST00000219689 SKOR2Q2VWA4 1001 aaPredicted RBP13.8□□□□□ -0.2
USP31-201ENST00000219689 CHMP4BQ9H444 224 aaKnown RBP13.79□□□□□ -0.2
USP31-201ENST00000219689 APBB1O00213 710 aa13.79□□□□□ -0.2
USP31-201ENST00000219689 NUDCQ9Y266 331 aa13.79□□□□□ -0.2
USP31-201ENST00000219689 NOL8Q76FK4 1167 aaKnown RBP13.79□□□□□ -0.2
USP31-201ENST00000219689 CFAP53Q96M91 514 aa13.79□□□□□ -0.2
USP31-201ENST00000219689 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
USP31-201ENST00000219689 CWC15Q9P013 229 aaKnown RBP13.78□□□□□ -0.2
USP31-201ENST00000219689 FOXD4L6Q3SYB3 417 aaPredicted RBP13.78□□□□□ -0.2
USP31-201ENST00000219689 FOXD4L3Q6VB84 417 aaPredicted RBP13.78□□□□□ -0.2
USP31-201ENST00000219689 AEBP1Q8IUX7 1158 aa13.78□□□□□ -0.2
USP31-201ENST00000219689 FBLN2P98095 1184 aa13.77□□□□□ -0.2
USP31-201ENST00000219689 NCBP3Q53F19 620 aaKnown RBP13.77□□□□□ -0.2
USP31-201ENST00000219689 KIF16BQ96L93 1317 aa13.76□□□□□ -0.21
USP31-201ENST00000219689 NASPP49321 788 aaPredicted RBP13.76□□□□□ -0.21
USP31-201ENST00000219689 FAM161AQ3B820 660 aa13.76□□□□□ -0.21
USP31-201ENST00000219689 PAK3O75914 559 aaPredicted RBP13.75□□□□□ -0.21
USP31-201ENST00000219689 RDXP35241 583 aaKnown RBP13.74□□□□□ -0.21
USP31-201ENST00000219689 KIAA1211Q6ZU35 1233 aa13.74□□□□□ -0.21
USP31-201ENST00000219689 CARD11Q9BXL7 1154 aa13.73□□□□□ -0.21
USP31-201ENST00000219689 UQCRHLA0A096LP55 91 aa13.73□□□□□ -0.21
USP31-201ENST00000219689 UQCRHP07919 91 aa13.73□□□□□ -0.21
USP31-201ENST00000219689 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
USP31-201ENST00000219689 MAPK8IP3Q9UPT6 1336 aa13.73□□□□□ -0.21
USP31-201ENST00000219689 RWDD1Q9H446 243 aaPredicted RBP13.73□□□□□ -0.21
USP31-201ENST00000219689 A0A0G2JS52 829 aa13.72□□□□□ -0.21
USP31-201ENST00000219689 CREBRFQ8IUR6 639 aa13.72□□□□□ -0.21
USP31-201ENST00000219689 ZCCHC6Q5VYS8 1495 aaKnown RBP13.72□□□□□ -0.21
USP31-201ENST00000219689 HSP90B1P14625 803 aaKnown RBP13.72□□□□□ -0.21
USP31-201ENST00000219689 HSP90AB3PQ58FF7 597 aa13.72□□□□□ -0.21
USP31-201ENST00000219689 ITPRIPQ8IWB1 547 aa13.72□□□□□ -0.21
USP31-201ENST00000219689 ZHX1Q9UKY1 873 aaPredicted RBP13.72□□□□□ -0.21
USP31-201ENST00000219689 TAF3Q5VWG9 929 aa13.71□□□□□ -0.21
USP31-201ENST00000219689 ERICH4A6NGS2 130 aa13.71□□□□□ -0.21
USP31-201ENST00000219689 PMFBP1Q8TBY8 1022 aa13.71□□□□□ -0.21
USP31-201ENST00000219689 MTUS2Q5JR59 1369 aa13.71□□□□□ -0.22
USP31-201ENST00000219689 ESF1Q9H501 851 aaKnown RBP13.7□□□□□ -0.22
USP31-201ENST00000219689 GOLGA3Q08378 1498 aa13.7□□□□□ -0.22
USP31-201ENST00000219689 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
USP31-201ENST00000219689 RGL3Q3MIN7 710 aa13.69□□□□□ -0.22
USP31-201ENST00000219689 CCDC39Q9UFE4 941 aa13.69□□□□□ -0.22
USP31-201ENST00000219689 TPM3P06753 285 aa13.69□□□□□ -0.22
USP31-201ENST00000219689 IFT57Q9NWB7 429 aa13.68□□□□□ -0.22
USP31-201ENST00000219689 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
USP31-201ENST00000219689 MRE11P49959 708 aa13.68□□□□□ -0.22
USP31-201ENST00000219689 E9PSI1 815 aa13.68□□□□□ -0.22
USP31-201ENST00000219689 CHMP4AQ9BY43 222 aa13.68□□□□□ -0.22
USP31-201ENST00000219689 ST18O60284 1047 aa13.67□□□□□ -0.22
USP31-201ENST00000219689 PLCD4Q9BRC7 762 aa13.67□□□□□ -0.22
USP31-201ENST00000219689 HSPA5P11021 654 aaKnown RBP13.67□□□□□ -0.22
USP31-201ENST00000219689 HOMER1Q86YM7 354 aa13.66□□□□□ -0.22
USP31-201ENST00000219689 CENPQQ7L2Z9 268 aaPredicted RBP13.66□□□□□ -0.22
USP31-201ENST00000219689 U2SURPO15042 1029 aaKnown RBP13.66□□□□□ -0.22
USP31-201ENST00000219689 H0YHG0 523 aa13.66□□□□□ -0.22
USP31-201ENST00000219689 HAP1P54257 671 aaPredicted RBP13.66□□□□□ -0.22
USP31-201ENST00000219689 DIAPH3Q9NSV4 1193 aa13.66□□□□□ -0.22
USP31-201ENST00000219689 RRP12Q5JTH9 1297 aaKnown RBP13.66□□□□□ -0.22
USP31-201ENST00000219689 PLIN1O60240 522 aa13.66□□□□□ -0.22
USP31-201ENST00000219689 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
USP31-201ENST00000219689 BBXQ8WY36 941 aaPredicted RBP13.66□□□□□ -0.22
USP31-201ENST00000219689 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
USP31-201ENST00000219689 FRAT2O75474 233 aaPredicted RBP13.65□□□□□ -0.22
USP31-201ENST00000219689 RBM25P49756 843 aaKnown RBP13.65□□□□□ -0.22
USP31-201ENST00000219689 ARGLU1Q9NWB6 273 aaPredicted RBP13.65□□□□□ -0.22
USP31-201ENST00000219689 CRBNQ96SW2 442 aa13.64□□□□□ -0.23
USP31-201ENST00000219689 CDCA8Q53HL2 280 aa13.64□□□□□ -0.23
USP31-201ENST00000219689 SKIDA1Q1XH10 827 aa13.64□□□□□ -0.23
USP31-201ENST00000219689 CCDC70Q6NSX1 233 aa13.64□□□□□ -0.23
USP31-201ENST00000219689 KTN1Q86UP2 1357 aaKnown RBP13.64□□□□□ -0.23
USP31-201ENST00000219689 GPATCH11Q8N954 259 aa13.63□□□□□ -0.23
USP31-201ENST00000219689 MYO10Q9HD67 2058 aa13.63□□□□□ -0.23
USP31-201ENST00000219689 TRIM6-TRIM34B2RNG4 842 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms