RNA–Protein interactions for RNA: ENST00000215743.7

MMP11-201, Transcript of matrix metallopeptidase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP11, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-201ENST00000215743 KIF14Q15058 1648 aa28.31■■■□□ 2.12
MMP11-201ENST00000215743 DENND4BO75064 1496 aaPredicted RBP28.31■■■□□ 2.12
MMP11-201ENST00000215743 DDX10Q13206 875 aaKnown RBP28.27■■■□□ 2.12
MMP11-201ENST00000215743 CFDP1Q9UEE9 299 aaPredicted RBP28.27■■■□□ 2.12
MMP11-201ENST00000215743 ZNF777Q9ULD5 760 aaPredicted RBP28.26■■■□□ 2.11
MMP11-201ENST00000215743 CAMSAP2Q08AD1 1489 aa28.25■■■□□ 2.11
MMP11-201ENST00000215743 MPHOSPH9Q99550 1183 aa28.25■■■□□ 2.11
MMP11-201ENST00000215743 ROCK1Q13464 1354 aa28.24■■■□□ 2.11
MMP11-201ENST00000215743 ITSN2Q9NZM3 1697 aa28.24■■■□□ 2.11
MMP11-201ENST00000215743 GPATCH8Q9UKJ3 1502 aaKnown RBP28.24■■■□□ 2.11
MMP11-201ENST00000215743 ABCA8O94911 1581 aa28.23■■■□□ 2.11
MMP11-201ENST00000215743 FOXD1Q16676 465 aa28.23■■■□□ 2.11
MMP11-201ENST00000215743 ADCY10Q96PN6 1610 aa28.23■■■□□ 2.11
MMP11-201ENST00000215743 KDM5BQ9UGL1 1544 aa28.2■■■□□ 2.11
MMP11-201ENST00000215743 ATP10BO94823 1461 aa28.17■■■□□ 2.1
MMP11-201ENST00000215743 PLEKHD1A6NEE1 506 aa28.17■■■□□ 2.1
MMP11-201ENST00000215743 CHD1O14646 1710 aa28.16■■■□□ 2.1
MMP11-201ENST00000215743 KCNH8Q96L42 1107 aa28.13■■■□□ 2.09
MMP11-201ENST00000215743 PTPRGP23470 1445 aa28.11■■■□□ 2.09
MMP11-201ENST00000215743 CDC42BPAQ5VT25 1732 aa28.08■■■□□ 2.09
MMP11-201ENST00000215743 ADGBQ8N7X0 1667 aa28.07■■■□□ 2.08
MMP11-201ENST00000215743 SLC4A1APQ9BWU0 796 aaKnown RBP28.07■■■□□ 2.08
MMP11-201ENST00000215743 CROCC2H7BZ55 1655 aa28.07■■■□□ 2.08
MMP11-201ENST00000215743 ABCC10Q5T3U5 1492 aa28.06■■■□□ 2.08
MMP11-201ENST00000215743 NCOA1Q15788 1441 aa28.06■■■□□ 2.08
MMP11-201ENST00000215743 L3MBTL2Q969R5 705 aa28.02■■■□□ 2.08
MMP11-201ENST00000215743 ANKRD30BQ9BXX2 1392 aa28.02■■■□□ 2.08
MMP11-201ENST00000215743 ADGRL2O95490 1459 aa28■■■□□ 2.07
MMP11-201ENST00000215743 ANKRD30AQ9BXX3 1397 aa27.98■■■□□ 2.07
MMP11-201ENST00000215743 PZPP20742 1482 aa27.98■■■□□ 2.07
MMP11-201ENST00000215743 RPRD2Q5VT52 1461 aaKnown RBP27.96■■■□□ 2.07
MMP11-201ENST00000215743 HSPA5P11021 654 aaKnown RBP27.94■■■□□ 2.06
MMP11-201ENST00000215743 ERCC6L2Q5T890 1561 aa27.93■■■□□ 2.06
MMP11-201ENST00000215743 SHROOM2Q13796 1616 aa27.93■■■□□ 2.06
MMP11-201ENST00000215743 C9orf84Q5VXU9 1444 aa27.93■■■□□ 2.06
MMP11-201ENST00000215743 ANP32CO43423 234 aa27.92■■■□□ 2.06
MMP11-201ENST00000215743 ANKRD50Q9ULJ7 1429 aa27.91■■■□□ 2.06
MMP11-201ENST00000215743 HNRNPMP52272 730 aaKnown RBP eCLIP27.9■■■□□ 2.06
MMP11-201ENST00000215743 TEX14Q8IWB6 1497 aa27.9■■■□□ 2.06
MMP11-201ENST00000215743 SHANK2Q9UPX8 1470 aa27.88■■■□□ 2.05
MMP11-201ENST00000215743 EIF4G2P78344 907 aaKnown RBP eCLIP27.87■■■□□ 2.05
MMP11-201ENST00000215743 TSPY4P0CV99 314 aa27.86■■■□□ 2.05
MMP11-201ENST00000215743 TSPY10P0CW01 314 aa27.86■■■□□ 2.05
MMP11-201ENST00000215743 NBPF8Q3BBV2 869 aa27.86■■■□□ 2.05
MMP11-201ENST00000215743 PKD2Q13563 968 aa27.84■■■□□ 2.05
MMP11-201ENST00000215743 KIAA1107Q9UPP5 1409 aa27.84■■■□□ 2.05
MMP11-201ENST00000215743 CDC42BPBQ9Y5S2 1711 aa27.83■■■□□ 2.05
MMP11-201ENST00000215743 WASHC2AQ641Q2 1341 aa27.83■■■□□ 2.05
MMP11-201ENST00000215743 SAMD9LQ8IVG5 1584 aa27.82■■■□□ 2.04
MMP11-201ENST00000215743 PREX2Q70Z35 1606 aa27.82■■■□□ 2.04
MMP11-201ENST00000215743 MBD5Q9P267 1494 aa27.8■■■□□ 2.04
MMP11-201ENST00000215743 TTC37Q6PGP7 1564 aa27.79■■■□□ 2.04
MMP11-201ENST00000215743 NUP155O75694 1391 aa27.79■■■□□ 2.04
MMP11-201ENST00000215743 KIF15Q9NS87 1388 aa27.79■■■□□ 2.04
MMP11-201ENST00000215743 ARHGEF5Q12774 1597 aa27.78■■■□□ 2.04
MMP11-201ENST00000215743 ABCC2Q92887 1545 aa27.78■■■□□ 2.04
MMP11-201ENST00000215743 CCER2I3L3R5 266 aa27.78■■■□□ 2.04
MMP11-201ENST00000215743 CCDC141Q6ZP82 1450 aa27.76■■■□□ 2.03
MMP11-201ENST00000215743 ARHGAP5Q13017 1502 aa27.74■■■□□ 2.03
MMP11-201ENST00000215743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.74■■■□□ 2.03
MMP11-201ENST00000215743 SYCP2Q9BX26 1530 aa27.72■■■□□ 2.03
MMP11-201ENST00000215743 ZNF326Q5BKZ1 582 aaKnown RBP27.71■■■□□ 2.03
MMP11-201ENST00000215743 CLASP1Q7Z460 1538 aa27.71■■■□□ 2.03
MMP11-201ENST00000215743 C11orf95C9JLR9 678 aaPredicted RBP27.7■■■□□ 2.03
MMP11-201ENST00000215743 KDM5DQ9BY66 1539 aa27.65■■■□□ 2.02
MMP11-201ENST00000215743 MYO5CQ9NQX4 1742 aa27.64■■■□□ 2.02
MMP11-201ENST00000215743 CCDC7Q96M83 1385 aa27.64■■■□□ 2.02
MMP11-201ENST00000215743 ZCCHC11Q5TAX3 1644 aaKnown RBP27.63■■■□□ 2.01
MMP11-201ENST00000215743 CNTLNQ9NXG0 1405 aa27.62■■■□□ 2.01
MMP11-201ENST00000215743 RSPH4AQ5TD94 716 aa27.62■■■□□ 2.01
MMP11-201ENST00000215743 SUPT16HQ9Y5B9 1047 aaKnown RBP27.62■■■□□ 2.01
MMP11-201ENST00000215743 SPATA31E1Q6ZUB1 1445 aa27.6■■■□□ 2.01
MMP11-201ENST00000215743 PELP1Q8IZL8 1130 aaKnown RBP27.57■■■□□ 2
MMP11-201ENST00000215743 FAM135AQ9P2D6 1515 aa27.56■■■□□ 2
MMP11-201ENST00000215743 KIF7Q2M1P5 1343 aa27.55■■■□□ 2
MMP11-201ENST00000215743 MAST1Q9Y2H9 1570 aa27.54■■■□□ 2
MMP11-201ENST00000215743 ARHGEF12Q9NZN5 1544 aa27.53■■■□□ 2
MMP11-201ENST00000215743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.53■■■□□ 2
MMP11-201ENST00000215743 UHRF1BP1LA0JNW5 1464 aa27.53■■■□□ 2
MMP11-201ENST00000215743 USP47Q96K76 1375 aa27.52■■■□□ 2
MMP11-201ENST00000215743 KDM2AQ9Y2K7 1162 aa27.51■■□□□ 1.99
MMP11-201ENST00000215743 PLEKHH2Q8IVE3 1493 aa27.51■■□□□ 1.99
MMP11-201ENST00000215743 PLCH2O75038 1416 aa27.49■■□□□ 1.99
MMP11-201ENST00000215743 POLR1AO95602 1720 aaPredicted RBP27.48■■□□□ 1.99
MMP11-201ENST00000215743 POLR3GLQ9BT43 218 aa27.47■■□□□ 1.99
MMP11-201ENST00000215743 PLXNC1O60486 1568 aa27.46■■□□□ 1.99
MMP11-201ENST00000215743 UNC13BO14795 1591 aa27.46■■□□□ 1.99
MMP11-201ENST00000215743 EFCAB2Q5VUJ9 269 aa27.46■■□□□ 1.99
MMP11-201ENST00000215743 UHRF1BP1Q6BDS2 1440 aa27.45■■□□□ 1.99
MMP11-201ENST00000215743 DCAF11Q8TEB1 546 aa27.45■■□□□ 1.98
MMP11-201ENST00000215743 KDM5CP41229 1560 aa27.44■■□□□ 1.98
MMP11-201ENST00000215743 RALGAPBQ86X10 1494 aa27.44■■□□□ 1.98
MMP11-201ENST00000215743 BCORL1Q5H9F3 1711 aa27.44■■□□□ 1.98
MMP11-201ENST00000215743 CCDC184Q52MB2 194 aa27.43■■□□□ 1.98
MMP11-201ENST00000215743 PRKRIP1Q9H875 184 aaPredicted RBP27.42■■□□□ 1.98
MMP11-201ENST00000215743 ABCC1P33527 1531 aa27.42■■□□□ 1.98
MMP11-201ENST00000215743 HNRNPUQ00839 825 aaKnown RBP eCLIP27.41■■□□□ 1.98
MMP11-201ENST00000215743 CARD11Q9BXL7 1154 aa27.41■■□□□ 1.98
MMP11-201ENST00000215743 TRAPPC8Q9Y2L5 1435 aa27.4■■□□□ 1.98
MMP11-201ENST00000215743 CCDC144AA2RUR9 1427 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms