RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 KCNH8Q96L42 1107 aa4.38□□□□□ -1.71
NEB-201ENST00000172853 TONSLQ96HA7 1378 aa4.38□□□□□ -1.71
NEB-201ENST00000172853 HTATSF1O43719 755 aaKnown RBP4.38□□□□□ -1.71
NEB-201ENST00000172853 RTF1Q92541 710 aaKnown RBP4.38□□□□□ -1.71
NEB-201ENST00000172853 RASSF8Q8NHQ8 419 aa4.38□□□□□ -1.71
NEB-201ENST00000172853 DEKP35659 375 aaKnown RBP4.38□□□□□ -1.71
NEB-201ENST00000172853 PODXL2Q9NZ53 605 aa4.38□□□□□ -1.71
NEB-201ENST00000172853 FTSJ3Q8IY81 847 aaKnown RBP4.38□□□□□ -1.71
NEB-201ENST00000172853 KDM2AQ9Y2K7 1162 aa4.38□□□□□ -1.71
NEB-201ENST00000172853 MIER1Q8N108 512 aa4.37□□□□□ -1.71
NEB-201ENST00000172853 GOLGA6L1Q8N7Z2 621 aa4.37□□□□□ -1.71
NEB-201ENST00000172853 ZNF330Q9Y3S2 320 aaPredicted RBP4.37□□□□□ -1.71
NEB-201ENST00000172853 WDHD1O75717 1129 aaPredicted RBP4.37□□□□□ -1.71
NEB-201ENST00000172853 CCDC43Q96MW1 224 aaKnown RBP4.36□□□□□ -1.71
NEB-201ENST00000172853 RRP12Q5JTH9 1297 aaKnown RBP4.36□□□□□ -1.71
NEB-201ENST00000172853 WWC1Q8IX03 1113 aa4.36□□□□□ -1.71
NEB-201ENST00000172853 PPM1FP49593 454 aaPredicted RBP4.36□□□□□ -1.71
NEB-201ENST00000172853 DRC7Q8IY82 874 aa4.36□□□□□ -1.71
NEB-201ENST00000172853 TPM2P07951 284 aa4.36□□□□□ -1.71
NEB-201ENST00000172853 KIAA1211Q6ZU35 1233 aa4.36□□□□□ -1.71
NEB-201ENST00000172853 EVA1CP58658 441 aa4.36□□□□□ -1.71
NEB-201ENST00000172853 PAK3O75914 559 aaPredicted RBP4.35□□□□□ -1.71
NEB-201ENST00000172853 VSIG10Q8N0Z9 540 aa4.35□□□□□ -1.71
NEB-201ENST00000172853 GPATCH3Q96I76 525 aa4.35□□□□□ -1.71
NEB-201ENST00000172853 FAM9BQ8IZU0 186 aa4.35□□□□□ -1.71
NEB-201ENST00000172853 PLEKHD1A6NEE1 506 aa4.35□□□□□ -1.71
NEB-201ENST00000172853 TMEM87AQ8NBN3 555 aa4.35□□□□□ -1.71
NEB-201ENST00000172853 HMGB2P26583 209 aaKnown RBP4.34□□□□□ -1.71
NEB-201ENST00000172853 TIMELESSQ9UNS1 1208 aa4.34□□□□□ -1.71
NEB-201ENST00000172853 RB1CC1Q8TDY2 1594 aa4.34□□□□□ -1.71
NEB-201ENST00000172853 CALRP27797 417 aaKnown RBP4.34□□□□□ -1.71
NEB-201ENST00000172853 CHMP4CQ96CF2 233 aa4.34□□□□□ -1.71
NEB-201ENST00000172853 CHMP3Q9Y3E7 222 aa4.34□□□□□ -1.71
NEB-201ENST00000172853 KANK1Q14678 1352 aa4.34□□□□□ -1.71
NEB-201ENST00000172853 ODF2Q5BJF6 829 aa4.34□□□□□ -1.71
NEB-201ENST00000172853 CCDC47Q96A33 483 aaKnown RBP4.34□□□□□ -1.71
NEB-201ENST00000172853 TPM3P06753 285 aa4.34□□□□□ -1.72
NEB-201ENST00000172853 MLECQ14165 292 aa4.34□□□□□ -1.72
NEB-201ENST00000172853 EID1Q9Y6B2 187 aa4.34□□□□□ -1.72
NEB-201ENST00000172853 RDXP35241 583 aaKnown RBP4.33□□□□□ -1.72
NEB-201ENST00000172853 KNSTRNQ9Y448 316 aa4.33□□□□□ -1.72
NEB-201ENST00000172853 IRX6P78412 446 aaPredicted RBP4.33□□□□□ -1.72
NEB-201ENST00000172853 SEPT11Q9NVA2 429 aaKnown RBP4.33□□□□□ -1.72
NEB-201ENST00000172853 HSP90AB1P08238 724 aaKnown RBP4.33□□□□□ -1.72
NEB-201ENST00000172853 CCDC97Q96F63 343 aaPredicted RBP4.33□□□□□ -1.72
NEB-201ENST00000172853 SPDYE4A6NLX3 237 aa4.33□□□□□ -1.72
NEB-201ENST00000172853 TSR1Q2NL82 804 aaKnown RBP4.33□□□□□ -1.72
NEB-201ENST00000172853 AKAP17AQ02040 695 aaKnown RBP4.33□□□□□ -1.72
NEB-201ENST00000172853 FBXW7Q969H0 707 aa4.33□□□□□ -1.72
NEB-201ENST00000172853 SMC4Q9NTJ3 1288 aa4.32□□□□□ -1.72
NEB-201ENST00000172853 RAD21O60216 631 aa4.32□□□□□ -1.72
NEB-201ENST00000172853 HNRNPUQ00839 825 aaKnown RBP eCLIP4.32□□□□□ -1.72
NEB-201ENST00000172853 SETQ01105 290 aaPredicted RBP4.32□□□□□ -1.72
NEB-201ENST00000172853 TMEM132AQ24JP5 1023 aa4.31□□□□□ -1.72
NEB-201ENST00000172853 CREBRFQ8IUR6 639 aa4.31□□□□□ -1.72
NEB-201ENST00000172853 TSHZ2Q9NRE2 1034 aa4.31□□□□□ -1.72
NEB-201ENST00000172853 TPD52L1Q16890 204 aaPredicted RBP4.31□□□□□ -1.72
NEB-201ENST00000172853 MYO15BQ96JP2 1530 aa4.31□□□□□ -1.72
NEB-201ENST00000172853 CCDC70Q6NSX1 233 aa4.31□□□□□ -1.72
NEB-201ENST00000172853 SYNE3Q6ZMZ3 975 aa4.31□□□□□ -1.72
NEB-201ENST00000172853 HSP90B1P14625 803 aaKnown RBP4.31□□□□□ -1.72
NEB-201ENST00000172853 TRIM21P19474 475 aaKnown RBP4.31□□□□□ -1.72
NEB-201ENST00000172853 TOMM22Q9NS69 142 aa4.31□□□□□ -1.72
NEB-201ENST00000172853 RBM33Q96EV2 1170 aaKnown RBP4.3□□□□□ -1.72
NEB-201ENST00000172853 CALD1Q05682 793 aaKnown RBP4.3□□□□□ -1.72
NEB-201ENST00000172853 LRRFIP1Q32MZ4 808 aaKnown RBP4.3□□□□□ -1.72
NEB-201ENST00000172853 HDGFL2Q7Z4V5 671 aaPredicted RBP4.3□□□□□ -1.72
NEB-201ENST00000172853 DNAI2Q9GZS0 605 aa4.3□□□□□ -1.72
NEB-201ENST00000172853 CHIC2Q9UKJ5 165 aa4.3□□□□□ -1.72
NEB-201ENST00000172853 U2SURPO15042 1029 aaKnown RBP4.3□□□□□ -1.72
NEB-201ENST00000172853 CT47A1Q5JQC4 288 aaPredicted RBP4.3□□□□□ -1.72
NEB-201ENST00000172853 SOX12O15370 315 aa4.3□□□□□ -1.72
NEB-201ENST00000172853 TPM1P09493 284 aa4.3□□□□□ -1.72
NEB-201ENST00000172853 PKNOX2Q96KN3 472 aa4.3□□□□□ -1.72
NEB-201ENST00000172853 WDR70Q9NW82 654 aa4.3□□□□□ -1.72
NEB-201ENST00000172853 CSPP1Q1MSJ5 1256 aa4.29□□□□□ -1.72
NEB-201ENST00000172853 SPAG9O60271 1321 aaKnown RBP4.29□□□□□ -1.72
NEB-201ENST00000172853 HMMRO75330 724 aa4.29□□□□□ -1.72
NEB-201ENST00000172853 KIF3AQ9Y496 699 aa4.29□□□□□ -1.72
NEB-201ENST00000172853 PPP1R1BQ9UD71 204 aaPredicted RBP4.29□□□□□ -1.72
NEB-201ENST00000172853 AK7Q96M32 723 aa4.29□□□□□ -1.72
NEB-201ENST00000172853 SUPT16HQ9Y5B9 1047 aaKnown RBP4.29□□□□□ -1.72
NEB-201ENST00000172853 DHX16O60231 1041 aaKnown RBP4.28□□□□□ -1.72
NEB-201ENST00000172853 CDR1P51861 262 aa4.28□□□□□ -1.72
NEB-201ENST00000172853 PTMSP20962 102 aa4.28□□□□□ -1.72
NEB-201ENST00000172853 NOP2P46087 812 aaKnown RBP4.28□□□□□ -1.72
NEB-201ENST00000172853 ZRSR2Q15696 482 aaKnown RBP4.28□□□□□ -1.72
NEB-201ENST00000172853 DESP17661 470 aa4.28□□□□□ -1.72
NEB-201ENST00000172853 ARID3AQ99856 593 aa4.28□□□□□ -1.72
NEB-201ENST00000172853 IPO9Q96P70 1041 aaKnown RBP4.28□□□□□ -1.73
NEB-201ENST00000172853 STK31Q9BXU1 1019 aa4.28□□□□□ -1.73
NEB-201ENST00000172853 MSNP26038 577 aaKnown RBP4.27□□□□□ -1.73
NEB-201ENST00000172853 GRIPAP1Q4V328 841 aa4.27□□□□□ -1.73
NEB-201ENST00000172853 TNNT3P45378 269 aaPredicted RBP4.27□□□□□ -1.73
NEB-201ENST00000172853 HSCBQ8IWL3 235 aa4.27□□□□□ -1.73
NEB-201ENST00000172853 MRS2Q9HD23 443 aa4.27□□□□□ -1.73
NEB-201ENST00000172853 PES1O00541 588 aaKnown RBP4.27□□□□□ -1.73
NEB-201ENST00000172853 VPS37DQ86XT2 251 aa4.27□□□□□ -1.73
NEB-201ENST00000172853 MTUS2Q5JR59 1369 aa4.27□□□□□ -1.73
NEB-201ENST00000172853 ANKRD18AQ8IVF6 992 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms