RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 CARMIL2Q6F5E8 1435 aa24.22■■□□□ 1.47
MBD3-201ENST00000156825 PAK3O75914 559 aaPredicted RBP24.22■■□□□ 1.47
MBD3-201ENST00000156825 L3MBTL2Q969R5 705 aa24.22■■□□□ 1.47
MBD3-201ENST00000156825 FHOD3Q2V2M9 1422 aa24.22■■□□□ 1.47
MBD3-201ENST00000156825 U2AF1L5P0DN76 240 aaPredicted RBP24.22■■□□□ 1.47
MBD3-201ENST00000156825 U2AF1Q01081 240 aaKnown RBP eCLIP24.22■■□□□ 1.47
MBD3-201ENST00000156825 ROCK2O75116 1388 aaKnown RBP24.22■■□□□ 1.47
MBD3-201ENST00000156825 ANP32EQ9BTT0 268 aa24.21■■□□□ 1.47
MBD3-201ENST00000156825 CCER2I3L3R5 266 aa24.2■■□□□ 1.47
MBD3-201ENST00000156825 PTMAP06454 111 aaKnown RBP24.2■■□□□ 1.47
MBD3-201ENST00000156825 KCNJ4P48050 445 aa24.2■■□□□ 1.47
MBD3-201ENST00000156825 NAP1L2Q9ULW6 460 aaPredicted RBP24.2■■□□□ 1.47
MBD3-201ENST00000156825 PLCB2Q00722 1185 aa24.2■■□□□ 1.46
MBD3-201ENST00000156825 PDS5BQ9NTI5 1447 aa24.2■■□□□ 1.46
MBD3-201ENST00000156825 FGD1P98174 961 aa24.19■■□□□ 1.46
MBD3-201ENST00000156825 RTN4Q9NQC3 1192 aaKnown RBP24.19■■□□□ 1.46
MBD3-201ENST00000156825 HDGFP51858 240 aaKnown RBP24.19■■□□□ 1.46
MBD3-201ENST00000156825 CDK11BP21127 795 aaKnown RBP24.18■■□□□ 1.46
MBD3-201ENST00000156825 NOP58Q9Y2X3 529 aaKnown RBP24.18■■□□□ 1.46
MBD3-201ENST00000156825 ZRSR1Q15695 479 aaKnown RBP24.18■■□□□ 1.46
MBD3-201ENST00000156825 HSP90AB1P08238 724 aaKnown RBP24.18■■□□□ 1.46
MBD3-201ENST00000156825 PNNQ9H307 717 aaKnown RBP24.18■■□□□ 1.46
MBD3-201ENST00000156825 KTN1Q86UP2 1357 aaKnown RBP24.17■■□□□ 1.46
MBD3-201ENST00000156825 MS4A1P11836 297 aa24.15■■□□□ 1.46
MBD3-201ENST00000156825 WIZO95785 1651 aa24.15■■□□□ 1.46
MBD3-201ENST00000156825 FMN1Q68DA7 1419 aa24.14■■□□□ 1.46
MBD3-201ENST00000156825 HDGFL2Q7Z4V5 671 aaPredicted RBP24.14■■□□□ 1.46
MBD3-201ENST00000156825 NUTM2FA1L443 756 aa24.14■■□□□ 1.45
MBD3-201ENST00000156825 RTF1Q92541 710 aaKnown RBP24.13■■□□□ 1.45
MBD3-201ENST00000156825 ANKRD30AQ9BXX3 1397 aa24.12■■□□□ 1.45
MBD3-201ENST00000156825 CHMP4BQ9H444 224 aaKnown RBP24.1■■□□□ 1.45
MBD3-201ENST00000156825 SMARCA2P51531 1590 aa24.09■■□□□ 1.45
MBD3-201ENST00000156825 ZNF330Q9Y3S2 320 aaPredicted RBP24.09■■□□□ 1.45
MBD3-201ENST00000156825 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
MBD3-201ENST00000156825 CCDC146Q8IYE0 955 aa24.09■■□□□ 1.45
MBD3-201ENST00000156825 RCAN3Q9UKA8 241 aa24.09■■□□□ 1.45
MBD3-201ENST00000156825 JPH4Q96JJ6 628 aa24.08■■□□□ 1.45
MBD3-201ENST00000156825 DNTTIP2Q5QJE6 756 aaKnown RBP24.08■■□□□ 1.44
MBD3-201ENST00000156825 GOLGA2Q08379 1002 aa24.05■■□□□ 1.44
MBD3-201ENST00000156825 GLIPR1L2Q4G1C9 344 aa24.05■■□□□ 1.44
MBD3-201ENST00000156825 CADPSQ9ULU8 1353 aa24.05■■□□□ 1.44
MBD3-201ENST00000156825 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
MBD3-201ENST00000156825 RBM19Q9Y4C8 960 aaKnown RBP24.04■■□□□ 1.44
MBD3-201ENST00000156825 CLUAP1Q96AJ1 413 aa24.04■■□□□ 1.44
MBD3-201ENST00000156825 SPAG9O60271 1321 aaKnown RBP24.03■■□□□ 1.44
MBD3-201ENST00000156825 ITPRIPQ8IWB1 547 aa24.03■■□□□ 1.44
MBD3-201ENST00000156825 CSB-PGBD3P0DP91 1061 aa24.02■■□□□ 1.44
MBD3-201ENST00000156825 TRAK1Q9UPV9 953 aa24.02■■□□□ 1.44
MBD3-201ENST00000156825 WASHC2CQ9Y4E1 1318 aa24.02■■□□□ 1.44
MBD3-201ENST00000156825 HSCBQ8IWL3 235 aa24■■□□□ 1.43
MBD3-201ENST00000156825 RALBP1Q15311 655 aa23.99■■□□□ 1.43
MBD3-201ENST00000156825 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.98■■□□□ 1.43
MBD3-201ENST00000156825 ST20-MTHFSA0A0A6YYL1 179 aa23.97■■□□□ 1.43
MBD3-201ENST00000156825 LTV1Q96GA3 475 aaPredicted RBP23.95■■□□□ 1.42
MBD3-201ENST00000156825 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.42
MBD3-201ENST00000156825 IPO8O15397 1037 aaKnown RBP23.94■■□□□ 1.42
MBD3-201ENST00000156825 RRP7AQ9Y3A4 280 aaKnown RBP23.94■■□□□ 1.42
MBD3-201ENST00000156825 SLKQ9H2G2 1235 aaPredicted RBP23.92■■□□□ 1.42
MBD3-201ENST00000156825 SMC4Q9NTJ3 1288 aa23.91■■□□□ 1.42
MBD3-201ENST00000156825 GOLGA6L4A6NEF3 574 aa23.9■■□□□ 1.42
MBD3-201ENST00000156825 NGDNQ8NEJ9 315 aaKnown RBP23.9■■□□□ 1.42
MBD3-201ENST00000156825 NAP1L5Q96NT1 182 aaPredicted RBP23.88■■□□□ 1.41
MBD3-201ENST00000156825 SLC4A10Q6U841 1118 aa23.88■■□□□ 1.41
MBD3-201ENST00000156825 NLRP13Q86W25 1043 aa23.88■■□□□ 1.41
MBD3-201ENST00000156825 TERF2IPQ9NYB0 399 aa23.88■■□□□ 1.41
MBD3-201ENST00000156825 ERICH6BQ5W0A0 696 aa23.87■■□□□ 1.41
MBD3-201ENST00000156825 ATAD2BQ9ULI0 1458 aa23.87■■□□□ 1.41
MBD3-201ENST00000156825 ISY1Q9ULR0 285 aaKnown RBP23.86■■□□□ 1.41
MBD3-201ENST00000156825 PANK3Q9H999 370 aa23.86■■□□□ 1.41
MBD3-201ENST00000156825 ELL2O00472 640 aaPredicted RBP23.85■■□□□ 1.41
MBD3-201ENST00000156825 RWDD1Q9H446 243 aaPredicted RBP23.85■■□□□ 1.41
MBD3-201ENST00000156825 MCCP23508 829 aa23.84■■□□□ 1.41
MBD3-201ENST00000156825 CCDC18Q5T9S5 1454 aa23.84■■□□□ 1.41
MBD3-201ENST00000156825 BCL2L13Q9BXK5 485 aa23.84■■□□□ 1.41
MBD3-201ENST00000156825 CYB5RLQ6IPT4 315 aa23.83■■□□□ 1.41
MBD3-201ENST00000156825 GZF1Q9H116 711 aaPredicted RBP23.82■■□□□ 1.4
MBD3-201ENST00000156825 DHX57Q6P158 1386 aaKnown RBP23.82■■□□□ 1.4
MBD3-201ENST00000156825 EIF3AQ14152 1382 aaKnown RBP23.82■■□□□ 1.4
MBD3-201ENST00000156825 STK31Q9BXU1 1019 aa23.82■■□□□ 1.4
MBD3-201ENST00000156825 CHMP3Q9Y3E7 222 aa23.81■■□□□ 1.4
MBD3-201ENST00000156825 MFAP1P55081 439 aaKnown RBP23.81■■□□□ 1.4
MBD3-201ENST00000156825 CCDC9Q9Y3X0 531 aaKnown RBP23.81■■□□□ 1.4
MBD3-201ENST00000156825 AMPHP49418 695 aa23.81■■□□□ 1.4
MBD3-201ENST00000156825 EID1Q9Y6B2 187 aa23.81■■□□□ 1.4
MBD3-201ENST00000156825 CALD1Q05682 793 aaKnown RBP23.81■■□□□ 1.4
MBD3-201ENST00000156825 KIAA1211Q6ZU35 1233 aa23.8■■□□□ 1.4
MBD3-201ENST00000156825 RSPH4AQ5TD94 716 aa23.8■■□□□ 1.4
MBD3-201ENST00000156825 PLIN1O60240 522 aa23.78■■□□□ 1.4
MBD3-201ENST00000156825 CENPJQ9HC77 1338 aaPredicted RBP23.76■■□□□ 1.39
MBD3-201ENST00000156825 DEKP35659 375 aaKnown RBP23.76■■□□□ 1.39
MBD3-201ENST00000156825 CCDC144AA2RUR9 1427 aa23.75■■□□□ 1.39
MBD3-201ENST00000156825 ZNF644Q9H582 1327 aaPredicted RBP23.74■■□□□ 1.39
MBD3-201ENST00000156825 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
MBD3-201ENST00000156825 TRIM6-TRIM34B2RNG4 842 aa23.74■■□□□ 1.39
MBD3-201ENST00000156825 NOL8Q76FK4 1167 aaKnown RBP23.74■■□□□ 1.39
MBD3-201ENST00000156825 FOXD4L1Q9NU39 408 aa23.73■■□□□ 1.39
MBD3-201ENST00000156825 MINK1Q8N4C8 1332 aaPredicted RBP23.73■■□□□ 1.39
MBD3-201ENST00000156825 PTPRGP23470 1445 aa23.72■■□□□ 1.39
MBD3-201ENST00000156825 TCERG1O14776 1098 aaKnown RBP23.72■■□□□ 1.39
MBD3-201ENST00000156825 TSHZ2Q9NRE2 1034 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms