RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 EFCAB2Q5VUJ9 269 aa26.02■■□□□ 1.76
ERCC1-201ENST00000013807 CASKIN1Q8WXD9 1431 aa26.02■■□□□ 1.76
ERCC1-201ENST00000013807 ZFYVE16Q7Z3T8 1539 aa26.02■■□□□ 1.76
ERCC1-201ENST00000013807 SIGLEC1Q9BZZ2 1709 aa26■■□□□ 1.75
ERCC1-201ENST00000013807 CLIP1P30622 1438 aa25.99■■□□□ 1.75
ERCC1-201ENST00000013807 ARID4BQ4LE39 1312 aaPredicted RBP25.99■■□□□ 1.75
ERCC1-201ENST00000013807 CCDC18Q5T9S5 1454 aa25.98■■□□□ 1.75
ERCC1-201ENST00000013807 YEATS2Q9ULM3 1422 aa25.98■■□□□ 1.75
ERCC1-201ENST00000013807 CDC42BPBQ9Y5S2 1711 aa25.97■■□□□ 1.75
ERCC1-201ENST00000013807 PCF11O94913 1555 aaKnown RBP25.97■■□□□ 1.75
ERCC1-201ENST00000013807 RIMS1Q86UR5 1692 aaKnown RBP25.93■■□□□ 1.74
ERCC1-201ENST00000013807 KDM5CP41229 1560 aa25.92■■□□□ 1.74
ERCC1-201ENST00000013807 ZNF518AQ6AHZ1 1483 aa25.91■■□□□ 1.74
ERCC1-201ENST00000013807 FYCO1Q9BQS8 1478 aa25.91■■□□□ 1.74
ERCC1-201ENST00000013807 ARHGAP5Q13017 1502 aa25.91■■□□□ 1.74
ERCC1-201ENST00000013807 ATP10AO60312 1499 aa25.91■■□□□ 1.74
ERCC1-201ENST00000013807 PREX2Q70Z35 1606 aa25.89■■□□□ 1.74
ERCC1-201ENST00000013807 CDC42BPAQ5VT25 1732 aa25.85■■□□□ 1.73
ERCC1-201ENST00000013807 FER1L4A9Z1Z3 1794 aa25.85■■□□□ 1.73
ERCC1-201ENST00000013807 C9orf84Q5VXU9 1444 aa25.85■■□□□ 1.73
ERCC1-201ENST00000013807 LMTK3Q96Q04 1460 aa25.84■■□□□ 1.73
ERCC1-201ENST00000013807 AFAP1Q8N556 730 aa25.83■■□□□ 1.73
ERCC1-201ENST00000013807 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.72
ERCC1-201ENST00000013807 ILDR1Q86SU0 546 aaPredicted RBP25.82■■□□□ 1.72
ERCC1-201ENST00000013807 MLH3Q9UHC1 1453 aa25.82■■□□□ 1.72
ERCC1-201ENST00000013807 REREQ9P2R6 1566 aa25.82■■□□□ 1.72
ERCC1-201ENST00000013807 ABCC1P33527 1531 aa25.81■■□□□ 1.72
ERCC1-201ENST00000013807 ITSN2Q9NZM3 1697 aa25.79■■□□□ 1.72
ERCC1-201ENST00000013807 DIP2CQ9Y2E4 1556 aa25.78■■□□□ 1.72
ERCC1-201ENST00000013807 TRAPPC8Q9Y2L5 1435 aa25.74■■□□□ 1.71
ERCC1-201ENST00000013807 SETD1BQ9UPS6 1966 aaKnown RBP25.74■■□□□ 1.71
ERCC1-201ENST00000013807 ABCA6Q8N139 1617 aa25.73■■□□□ 1.71
ERCC1-201ENST00000013807 KIDINS220Q9ULH0 1771 aa25.72■■□□□ 1.71
ERCC1-201ENST00000013807 MLECQ14165 292 aa25.72■■□□□ 1.71
ERCC1-201ENST00000013807 GPATCH8Q9UKJ3 1502 aaKnown RBP25.72■■□□□ 1.71
ERCC1-201ENST00000013807 AGLP35573 1532 aa25.71■■□□□ 1.71
ERCC1-201ENST00000013807 SAMD9LQ8IVG5 1584 aa25.69■■□□□ 1.7
ERCC1-201ENST00000013807 PREX1Q8TCU6 1659 aa25.64■■□□□ 1.7
ERCC1-201ENST00000013807 KIAA1107Q9UPP5 1409 aa25.64■■□□□ 1.7
ERCC1-201ENST00000013807 MYT1LQ9UL68 1186 aa25.62■■□□□ 1.69
ERCC1-201ENST00000013807 PLEKHH2Q8IVE3 1493 aa25.61■■□□□ 1.69
ERCC1-201ENST00000013807 SYCP2Q9BX26 1530 aa25.6■■□□□ 1.69
ERCC1-201ENST00000013807 CEP162Q5TB80 1403 aa25.59■■□□□ 1.69
ERCC1-201ENST00000013807 MTUS2Q5JR59 1369 aa25.58■■□□□ 1.69
ERCC1-201ENST00000013807 HSPA2P54652 639 aa25.58■■□□□ 1.69
ERCC1-201ENST00000013807 CCNB3Q8WWL7 1395 aa25.57■■□□□ 1.68
ERCC1-201ENST00000013807 CFDP1Q9UEE9 299 aaPredicted RBP25.57■■□□□ 1.68
ERCC1-201ENST00000013807 C3P01024 1663 aa25.57■■□□□ 1.68
ERCC1-201ENST00000013807 CEBPAP49715 358 aaPredicted RBP25.56■■□□□ 1.68
ERCC1-201ENST00000013807 PLPPR3Q6T4P5 718 aa25.56■■□□□ 1.68
ERCC1-201ENST00000013807 ZNF777Q9ULD5 760 aaPredicted RBP25.56■■□□□ 1.68
ERCC1-201ENST00000013807 EHBP1L1Q8N3D4 1523 aa25.55■■□□□ 1.68
ERCC1-201ENST00000013807 INO80Q9ULG1 1556 aaPredicted RBP25.54■■□□□ 1.68
ERCC1-201ENST00000013807 HNRNPMP52272 730 aaKnown RBP eCLIP25.54■■□□□ 1.68
ERCC1-201ENST00000013807 FBXO41Q8TF61 875 aa25.54■■□□□ 1.68
ERCC1-201ENST00000013807 TIAM1Q13009 1591 aa25.53■■□□□ 1.68
ERCC1-201ENST00000013807 SPAG9O60271 1321 aaKnown RBP25.53■■□□□ 1.68
ERCC1-201ENST00000013807 ATP7AQ04656 1500 aa25.52■■□□□ 1.68
ERCC1-201ENST00000013807 CNTLNQ9NXG0 1405 aa25.51■■□□□ 1.67
ERCC1-201ENST00000013807 MROH2AA6NES4 1674 aa25.5■■□□□ 1.67
ERCC1-201ENST00000013807 PLXNC1O60486 1568 aa25.5■■□□□ 1.67
ERCC1-201ENST00000013807 STRCQ7RTU9 1775 aa25.49■■□□□ 1.67
ERCC1-201ENST00000013807 SUPT6HQ7KZ85 1726 aaKnown RBP25.48■■□□□ 1.67
ERCC1-201ENST00000013807 MBD5Q9P267 1494 aa25.47■■□□□ 1.67
ERCC1-201ENST00000013807 UHRF1BP1Q6BDS2 1440 aa25.46■■□□□ 1.67
ERCC1-201ENST00000013807 ADGBQ8N7X0 1667 aa25.45■■□□□ 1.67
ERCC1-201ENST00000013807 ESF1Q9H501 851 aaKnown RBP25.45■■□□□ 1.66
ERCC1-201ENST00000013807 A2MP01023 1474 aa25.44■■□□□ 1.66
ERCC1-201ENST00000013807 RTEL1-TNFRSF6BF6WH68 1400 aa25.42■■□□□ 1.66
ERCC1-201ENST00000013807 ZNF644Q9H582 1327 aaPredicted RBP25.41■■□□□ 1.66
ERCC1-201ENST00000013807 NPATQ14207 1427 aa25.4■■□□□ 1.66
ERCC1-201ENST00000013807 DMRT2Q9Y5R5 561 aa25.39■■□□□ 1.66
ERCC1-201ENST00000013807 NCOA2Q15596 1464 aa25.39■■□□□ 1.65
ERCC1-201ENST00000013807 PPP6R1Q9UPN7 881 aa25.38■■□□□ 1.65
ERCC1-201ENST00000013807 ZMYM3Q14202 1370 aa25.37■■□□□ 1.65
ERCC1-201ENST00000013807 VPS8Q8N3P4 1428 aa25.37■■□□□ 1.65
ERCC1-201ENST00000013807 RSPH4AQ5TD94 716 aa25.36■■□□□ 1.65
ERCC1-201ENST00000013807 CLTCQ00610 1675 aaKnown RBP25.36■■□□□ 1.65
ERCC1-201ENST00000013807 MAP3K1Q13233 1512 aa25.33■■□□□ 1.65
ERCC1-201ENST00000013807 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
ERCC1-201ENST00000013807 CERKQ8TCT0 537 aa25.32■■□□□ 1.64
ERCC1-201ENST00000013807 PTPRTO14522 1441 aa25.31■■□□□ 1.64
ERCC1-201ENST00000013807 DHX29Q7Z478 1369 aaKnown RBP25.31■■□□□ 1.64
ERCC1-201ENST00000013807 CAMSAP2Q08AD1 1489 aa25.3■■□□□ 1.64
ERCC1-201ENST00000013807 CCDC141Q6ZP82 1450 aa25.3■■□□□ 1.64
ERCC1-201ENST00000013807 LRRC9Q6ZRR7 1453 aa25.3■■□□□ 1.64
ERCC1-201ENST00000013807 ARHGEF5Q12774 1597 aa25.29■■□□□ 1.64
ERCC1-201ENST00000013807 PTPRKQ15262 1439 aa25.27■■□□□ 1.64
ERCC1-201ENST00000013807 GGT6Q6P531 493 aa25.26■■□□□ 1.63
ERCC1-201ENST00000013807 NCOA1Q15788 1441 aa25.26■■□□□ 1.63
ERCC1-201ENST00000013807 ZNF142P52746 1687 aaPredicted RBP25.26■■□□□ 1.63
ERCC1-201ENST00000013807 FAM135AQ9P2D6 1515 aa25.24■■□□□ 1.63
ERCC1-201ENST00000013807 MYO3AQ8NEV4 1616 aa25.22■■□□□ 1.63
ERCC1-201ENST00000013807 CAMSAP1Q5T5Y3 1602 aa25.2■■□□□ 1.62
ERCC1-201ENST00000013807 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
ERCC1-201ENST00000013807 PLA2R1Q13018 1463 aa25.17■■□□□ 1.62
ERCC1-201ENST00000013807 KANK4Q5T7N3 995 aaPredicted RBP25.17■■□□□ 1.62
ERCC1-201ENST00000013807 MIA2Q96PC5 1412 aa25.17■■□□□ 1.62
ERCC1-201ENST00000013807 CEP170BQ9Y4F5 1589 aaPredicted RBP25.17■■□□□ 1.62
ERCC1-201ENST00000013807 TSPY4P0CV99 314 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms