RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 TMEM121BQ99MX7 572 aa12.51□□□□□ -0.41
Ccdc47-202ENSMUST00000106865 Slc24a3Q99PD7 645 aa12.49□□□□□ -0.41
Ccdc47-202ENSMUST00000106865 Kif21aQ9QXL2 1672 aa12.48□□□□□ -0.41
Ccdc47-202ENSMUST00000106865 C1qbpO35658 278 aa12.45□□□□□ -0.42
Ccdc47-202ENSMUST00000106865 Pcdhb20Q91XZ9 799 aa12.45□□□□□ -0.42
Ccdc47-202ENSMUST00000106865 IncenpQ9WU62 880 aa12.45□□□□□ -0.42
Ccdc47-202ENSMUST00000106865 Stag3O70576 1240 aa12.44□□□□□ -0.42
Ccdc47-202ENSMUST00000106865 Ddx11Q6AXC6 880 aa12.44□□□□□ -0.42
Ccdc47-202ENSMUST00000106865 Ankrd65F6YK91 380 aa12.42□□□□□ -0.42
Ccdc47-202ENSMUST00000106865 Ak7Q9D2H2 614 aa12.42□□□□□ -0.42
Ccdc47-202ENSMUST00000106865 Otop3Q80UF9 577 aa12.41□□□□□ -0.42
Ccdc47-202ENSMUST00000106865 Dmrta2A2A9A2 531 aa12.39□□□□□ -0.43
Ccdc47-202ENSMUST00000106865 Apba2P98084 750 aa12.39□□□□□ -0.43
Ccdc47-202ENSMUST00000106865 Cttnbp2B9EJA2 1648 aa12.39□□□□□ -0.43
Ccdc47-202ENSMUST00000106865 Pdia6Q922R8 440 aaKnown RBP12.38□□□□□ -0.43
Ccdc47-202ENSMUST00000106865 Top2bQ64511 1612 aa12.37□□□□□ -0.43
Ccdc47-202ENSMUST00000106865 Pde8bE9Q4S1 865 aa12.37□□□□□ -0.43
Ccdc47-202ENSMUST00000106865 Rhox8Q6VSS7 320 aa12.37□□□□□ -0.43
Ccdc47-202ENSMUST00000106865 Scnn1bQ9WU38 638 aa12.36□□□□□ -0.43
Ccdc47-202ENSMUST00000106865 CftrP26361 1476 aa12.34□□□□□ -0.43
Ccdc47-202ENSMUST00000106865 Cux2P70298 1426 aa12.33□□□□□ -0.44
Ccdc47-202ENSMUST00000106865 Lrrc14bQ3UJB3 510 aa12.32□□□□□ -0.44
Ccdc47-202ENSMUST00000106865 Zcchc11B2RX14 1644 aaKnown RBP12.31□□□□□ -0.44
Ccdc47-202ENSMUST00000106865 Vsig10D3YX43 558 aa12.31□□□□□ -0.44
Ccdc47-202ENSMUST00000106865 Zc3h15Q3TIV5 426 aaKnown RBP12.31□□□□□ -0.44
Ccdc47-202ENSMUST00000106865 E2f4Q8R0K9 410 aa12.31□□□□□ -0.44
Ccdc47-202ENSMUST00000106865 ZyxQ62523 564 aa12.29□□□□□ -0.44
Ccdc47-202ENSMUST00000106865 Slain2Q8CI08 581 aa12.29□□□□□ -0.44
Ccdc47-202ENSMUST00000106865 Synj1Q8CHC4 1574 aa12.29□□□□□ -0.44
Ccdc47-202ENSMUST00000106865 Ciz1Q8VEH2 845 aa12.28□□□□□ -0.44
Ccdc47-202ENSMUST00000106865 Mnx1Q9QZW9 404 aa12.27□□□□□ -0.45
Ccdc47-202ENSMUST00000106865 Irx6Q9ER75 438 aa12.26□□□□□ -0.45
Ccdc47-202ENSMUST00000106865 Apba1B2RUJ5 842 aa12.25□□□□□ -0.45
Ccdc47-202ENSMUST00000106865 Pabpn1Q8CCS6 302 aaKnown RBP12.24□□□□□ -0.45
Ccdc47-202ENSMUST00000106865 Eya1P97767 591 aa12.22□□□□□ -0.45
Ccdc47-202ENSMUST00000106865 Sptlc1O35704 473 aa12.21□□□□□ -0.45
Ccdc47-202ENSMUST00000106865 Urb2E9Q7L1 1524 aaKnown RBP12.21□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 Pcdh10E9PXQ7 1057 aa12.2□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 Arhgef5E9Q7D5 1581 aa12.19□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 Ffar3Q3UFD7 319 aa12.19□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 Kif15Q6P9L6 1387 aa12.18□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 Rtl1Q7M732 1744 aa12.18□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 ZxdbA2CE44 873 aa12.18□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 Skiv2lQ6NZR5 1244 aa12.18□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 Fndc3aQ8BX90 1198 aa12.16□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 Bcl11bQ99PV8 884 aa12.16□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 Plb1Q3TTY0 1478 aa12.15□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 Bcl2l13P59017 434 aa12.15□□□□□ -0.46
Ccdc47-202ENSMUST00000106865 Mllt3A2AM29 569 aa12.14□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Npm1Q61937 292 aaKnown RBP12.14□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Lamc3Q9R0B6 1581 aa12.13□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Rusc2Q80U22 1514 aa12.13□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Irf6P97431 467 aa12.13□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Rasgrp4Q8BTM9 673 aa12.13□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Ggt6Q6PDE7 497 aa12.12□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 LipiF6YQT7 476 aa12.11□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Kdm2aP59997 1161 aa12.11□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Slc12a5Q91V14 1138 aa12.11□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Inpp5dQ9ES52 1191 aa12.11□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Gm13695A2AK44 830 aa12.1□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Tpcn2Q8BWC0 731 aa12.1□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 GcgrQ61606 485 aa12.09□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Dhx30Q99PU8 1217 aaKnown RBP12.09□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Pelp1Q9DBD5 1123 aaKnown RBP12.09□□□□□ -0.47
Ccdc47-202ENSMUST00000106865 Prr7Q3V0I2 269 aa12.08□□□□□ -0.48
Ccdc47-202ENSMUST00000106865 Brd4Q9ESU6 1400 aaKnown RBP12.08□□□□□ -0.48
Ccdc47-202ENSMUST00000106865 XpcP51612 930 aa12.06□□□□□ -0.48
Ccdc47-202ENSMUST00000106865 Rtl5Q5DTT4 599 aa12.06□□□□□ -0.48
Ccdc47-202ENSMUST00000106865 OscarQ8VBT3 265 aa12.06□□□□□ -0.48
Ccdc47-202ENSMUST00000106865 Fam117aQ7TNF9 451 aa12.05□□□□□ -0.48
Ccdc47-202ENSMUST00000106865 Crocc2F6XLV1 1638 aa12.04□□□□□ -0.48
Ccdc47-202ENSMUST00000106865 Cep164Q5DU05 1446 aa12.04□□□□□ -0.48
Ccdc47-202ENSMUST00000106865 Adgrl3Q80TS3 1537 aa12.03□□□□□ -0.48
Ccdc47-202ENSMUST00000106865 Fxr2Q9WVR4 673 aaKnown RBP12.03□□□□□ -0.48
Ccdc47-202ENSMUST00000106865 Dhx29Q6PGC1 1365 aaKnown RBP12.03□□□□□ -0.48
Ccdc47-202ENSMUST00000106865 Lrfn2Q80TG9 788 aa12□□□□□ -0.49
Ccdc47-202ENSMUST00000106865 Prrt3Q6PE13 971 aa11.99□□□□□ -0.49
Ccdc47-202ENSMUST00000106865 Ift140E9PY46 1464 aa11.97□□□□□ -0.49
Ccdc47-202ENSMUST00000106865 Dnm1lQ8K1M6 742 aa11.96□□□□□ -0.49
Ccdc47-202ENSMUST00000106865 Cep170Q6A065 1588 aa11.96□□□□□ -0.5
Ccdc47-202ENSMUST00000106865 Neurod1Q60867 357 aa11.95□□□□□ -0.5
Ccdc47-202ENSMUST00000106865 PtprtQ99M80 1454 aa11.95□□□□□ -0.5
Ccdc47-202ENSMUST00000106865 Dkk1O54908 272 aa11.93□□□□□ -0.5
Ccdc47-202ENSMUST00000106865 Masp1P98064 704 aa11.93□□□□□ -0.5
Ccdc47-202ENSMUST00000106865 Prom2Q3UUY6 835 aa11.91□□□□□ -0.5
Ccdc47-202ENSMUST00000106865 Fam181bQ80VF6 417 aa11.91□□□□□ -0.5
Ccdc47-202ENSMUST00000106865 GnpatP98192 678 aa11.9□□□□□ -0.5
Ccdc47-202ENSMUST00000106865 LrpprcQ6PB66 1392 aaKnown RBP11.9□□□□□ -0.5
Ccdc47-202ENSMUST00000106865 Pprc1Q6NZN1 1644 aa11.89□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 PtprkP35822 1457 aa11.89□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 Setd1bQ8CFT2 1985 aa11.89□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 PrimpolQ6P1E7 537 aa11.89□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 Ttbk1Q6PCN3 1308 aa11.88□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 TnnQ80Z71 1560 aa11.88□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 Tor1aip2Q8BYU6 502 aa11.88□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 Mink1Q9JM52 1308 aa11.87□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 TprnA2AI08 749 aaKnown RBP11.87□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 JmyQ9QXM1 983 aa11.87□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 Ccdc18Q640L5 1455 aa11.87□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 Camsap1A2AHC3 1581 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms