RNA–Protein interactions for RNA: ENSMUST00000085096.9

Ccdc88c-202, Transcript of Protein Daple, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ccdc88c, Length 6,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-202ENSMUST00000085096 Crybg2B7ZCC2 1516 aa19.5■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 Ofd1Q80Z25 1017 aa19.5■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 Nup155Q99P88 1391 aaKnown RBP19.5■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 Anp32aO35381 247 aa19.49■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 Fyco1Q8VDC1 1437 aa19.48■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 Mia2Q91ZV0 1396 aa19.48■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 U2surpQ6NV83 1029 aaKnown RBP19.47■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 Wwc2Q6NXJ0 1187 aa19.47■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 Gtf2e1Q9D0D5 440 aa19.47■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 Fan1Q69ZT1 1020 aa19.46■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 Arhgap35Q91YM2 1499 aa19.46■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 Carmil1Q6EDY6 1374 aa19.44■□□□□ 0.7
Ccdc88c-202ENSMUST00000085096 Dbr1Q923B1 550 aa19.43■□□□□ 0.7
Ccdc88c-202ENSMUST00000085096 Plekhh2Q8C115 1491 aa19.43■□□□□ 0.7
Ccdc88c-202ENSMUST00000085096 CntlnA2AM05 1397 aa19.4■□□□□ 0.7
Ccdc88c-202ENSMUST00000085096 Cc2d2bA0A286YDU8 1405 aa19.39■□□□□ 0.69
Ccdc88c-202ENSMUST00000085096 Pibf1E9Q6K3 756 aa19.37■□□□□ 0.69
Ccdc88c-202ENSMUST00000085096 Dcaf11Q91VU6 549 aa19.36■□□□□ 0.69
Ccdc88c-202ENSMUST00000085096 Jph4Q80WT0 628 aa19.35■□□□□ 0.69
Ccdc88c-202ENSMUST00000085096 Shq1Q7TMX5 569 aa19.34■□□□□ 0.69
Ccdc88c-202ENSMUST00000085096 Tdrd9Q14BI7 1383 aa19.32■□□□□ 0.68
Ccdc88c-202ENSMUST00000085096 Cwc22Q8C5N3 908 aaKnown RBP19.32■□□□□ 0.68
Ccdc88c-202ENSMUST00000085096 Dhx57Q6P5D3 1388 aaKnown RBP19.32■□□□□ 0.68
Ccdc88c-202ENSMUST00000085096 Utp14aQ640M1 767 aaKnown RBP19.31■□□□□ 0.68
Ccdc88c-202ENSMUST00000085096 DekQ7TNV0 380 aaKnown RBP19.3■□□□□ 0.68
Ccdc88c-202ENSMUST00000085096 Pak3Q61036 559 aa19.3■□□□□ 0.68
Ccdc88c-202ENSMUST00000085096 Tcerg1Q8CGF7 1100 aaKnown RBP19.29■□□□□ 0.68
Ccdc88c-202ENSMUST00000085096 Rock2P70336 1388 aa19.28■□□□□ 0.68
Ccdc88c-202ENSMUST00000085096 Frmpd1A2AKB4 1549 aa19.28■□□□□ 0.68
Ccdc88c-202ENSMUST00000085096 Znf330Q922H9 316 aa19.28■□□□□ 0.68
Ccdc88c-202ENSMUST00000085096 Mink1Q9JM52 1308 aa19.27■□□□□ 0.68
Ccdc88c-202ENSMUST00000085096 Trim30dE9PWL0 497 aa19.27■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Mrc2Q64449 1479 aa19.26■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Rtf1A2AQ19 715 aaKnown RBP19.26■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Duox2A2AQ99 1517 aa19.25■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 BicraF8VPZ9 1578 aa19.25■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Chrna2Q91X60 512 aa19.25■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Fhad1A6PWD2 1420 aa19.24■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 U2af1Q9D883 239 aaKnown RBP19.24■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Spag9Q58A65 1321 aaKnown RBP19.24■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 B4galnt3Q6L8S8 986 aa19.24■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Ppm1fQ8CGA0 452 aa19.24■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Upf2A2AT37 1269 aaKnown RBP19.23■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Zfp644E9QA22 1323 aa19.22■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Tmf1B9EKI3 1091 aa19.22■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Iqcf3Q9D498 203 aa19.22■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Speer4f1Q9D5Q6 258 aa19.22■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Slc4a3P16283 1227 aa19.21■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Exoc6Q8R313 802 aa19.21■□□□□ 0.67
Ccdc88c-202ENSMUST00000085096 Arhgap5P97393 1501 aa19.2■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Slc4a1apE9PX68 744 aa19.2■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Wdr43Q6ZQL4 677 aaKnown RBP19.2■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Znf326O88291 580 aa19.19■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Ciz1Q8VEH2 845 aa19.19■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Ap3b2Q9JME5 1082 aa19.19■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Map3k5O35099 1380 aa19.19■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Tmco5bQ80X59 307 aa19.17■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Hsp90ab1P11499 724 aaKnown RBP19.17■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Srcin1Q9QWI6 1250 aa19.17■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Ncoa2Q61026 1462 aa19.16■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 CrbnQ8C7D2 445 aa19.16■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Plb1Q3TTY0 1478 aa19.16■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Anks4bQ8K3X6 423 aa19.15■□□□□ 0.66
Ccdc88c-202ENSMUST00000085096 Usp40Q8BWR4 1235 aa19.14■□□□□ 0.65
Ccdc88c-202ENSMUST00000085096 Cabp4Q8VHC5 271 aa19.14■□□□□ 0.65
Ccdc88c-202ENSMUST00000085096 Usp47Q8BY87 1376 aa19.12■□□□□ 0.65
Ccdc88c-202ENSMUST00000085096 Hsp90aa1P07901 733 aaKnown RBP19.12■□□□□ 0.65
Ccdc88c-202ENSMUST00000085096 Q3TQI7 289 aaKnown RBP19.11■□□□□ 0.65
Ccdc88c-202ENSMUST00000085096 Evi5lH3BKQ3 813 aa19.1■□□□□ 0.65
Ccdc88c-202ENSMUST00000085096 4930567H17RikQ3V0K5 233 aa19.09■□□□□ 0.65
Ccdc88c-202ENSMUST00000085096 Arhgap31A6X8Z5 1425 aa19.09■□□□□ 0.65
Ccdc88c-202ENSMUST00000085096 Gm7298A0A0N4SVU1 1476 aa19.08■□□□□ 0.64
Ccdc88c-202ENSMUST00000085096 Q9D9H8 365 aa19.08■□□□□ 0.64
Ccdc88c-202ENSMUST00000085096 Crocc2F6XLV1 1638 aa19.07■□□□□ 0.64
Ccdc88c-202ENSMUST00000085096 Afap1Q80YS6 731 aa19.07■□□□□ 0.64
Ccdc88c-202ENSMUST00000085096 Pank3Q8R2W9 370 aa19.06■□□□□ 0.64
Ccdc88c-202ENSMUST00000085096 Top2aQ01320 1528 aaKnown RBP19.06■□□□□ 0.64
Ccdc88c-202ENSMUST00000085096 CenpjQ569L8 1344 aa19.06■□□□□ 0.64
Ccdc88c-202ENSMUST00000085096 Grin2bQ01097 1482 aa19.04■□□□□ 0.64
Ccdc88c-202ENSMUST00000085096 Gm21190A0A0G2JGJ6 266 aa19.03■□□□□ 0.64
Ccdc88c-202ENSMUST00000085096 SafbD3YXK2 937 aaKnown RBP19.03■□□□□ 0.64
Ccdc88c-202ENSMUST00000085096 Golga2Q921M4 999 aa19.02■□□□□ 0.64
Ccdc88c-202ENSMUST00000085096 Inpp5dQ9ES52 1191 aa19.02■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 NudcO35685 332 aaKnown RBP19.02■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 Cluap1Q8R3P7 413 aa19.01■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 Sh3bp5Q9Z131 463 aa19.01■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 PtprkP35822 1457 aa19.01■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 Hsp90b1P08113 802 aaKnown RBP19■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 Wdr62Q3U3T8 1523 aa19■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 Polr1aO35134 1717 aaKnown RBP19■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 Cyb5rlB1AS42 316 aa18.99■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 Ccdc141E9Q8Q6 1531 aa18.98■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 CanxP35564 591 aaKnown RBP18.97■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 PogzQ8BZH4 1409 aaKnown RBP18.97■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 ErbinQ80TH2 1402 aa18.97■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 HdgfP51859 237 aaKnown RBP18.96■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 Efcab5A0JP43 1406 aa18.96■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 Fyb1O35601 819 aa18.96■□□□□ 0.63
Ccdc88c-202ENSMUST00000085096 Neo1P97798 1493 aa18.95■□□□□ 0.62
Ccdc88c-202ENSMUST00000085096 Fgd6Q69ZL1 1399 aa18.95■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms