RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Kdm6bQ5NCY0 1641 aa28.9■■■□□ 2.22
Ctdsp1-201ENSMUST00000027367 Mroh2aD3Z750 1679 aa28.9■■■□□ 2.22
Ctdsp1-201ENSMUST00000027367 Adcy10Q8C0T9 1614 aa28.89■■■□□ 2.22
Ctdsp1-201ENSMUST00000027367 Rfx7F8VPJ6 1459 aa28.89■■■□□ 2.22
Ctdsp1-201ENSMUST00000027367 Cabp1Q9JLK7 227 aa28.89■■■□□ 2.22
Ctdsp1-201ENSMUST00000027367 Neo1P97798 1493 aa28.89■■■□□ 2.21
Ctdsp1-201ENSMUST00000027367 Fhod3Q76LL6 1578 aa28.88■■■□□ 2.21
Ctdsp1-201ENSMUST00000027367 Plekhh2Q8C115 1491 aa28.88■■■□□ 2.21
Ctdsp1-201ENSMUST00000027367 Magi1Q6RHR9 1471 aa28.88■■■□□ 2.21
Ctdsp1-201ENSMUST00000027367 Cul7Q8VE73 1689 aa28.85■■■□□ 2.21
Ctdsp1-201ENSMUST00000027367 Cdk11bP24788 784 aaKnown RBP28.84■■■□□ 2.21
Ctdsp1-201ENSMUST00000027367 Dhx57Q6P5D3 1388 aaKnown RBP28.84■■■□□ 2.21
Ctdsp1-201ENSMUST00000027367 Prex2Q3LAC4 1598 aa28.82■■■□□ 2.2
Ctdsp1-201ENSMUST00000027367 AknaQ80VW7 1404 aa28.8■■■□□ 2.2
Ctdsp1-201ENSMUST00000027367 Mapkbp1Q6NS57 1503 aa28.8■■■□□ 2.2
Ctdsp1-201ENSMUST00000027367 Jph4Q80WT0 628 aa28.79■■■□□ 2.2
Ctdsp1-201ENSMUST00000027367 Fam163aQ8CAA5 168 aa28.79■■■□□ 2.2
Ctdsp1-201ENSMUST00000027367 Arhgef12Q8R4H2 1543 aaKnown RBP28.79■■■□□ 2.2
Ctdsp1-201ENSMUST00000027367 NclP09405 707 aaKnown RBP28.79■■■□□ 2.2
Ctdsp1-201ENSMUST00000027367 Mtus2Q3UHD3 1353 aa28.79■■■□□ 2.2
Ctdsp1-201ENSMUST00000027367 Fgd6Q69ZL1 1399 aa28.77■■■□□ 2.2
Ctdsp1-201ENSMUST00000027367 SphkapQ6NSW3 1687 aa28.74■■■□□ 2.19
Ctdsp1-201ENSMUST00000027367 Rrbp1Q99PL5 1605 aaKnown RBP28.74■■■□□ 2.19
Ctdsp1-201ENSMUST00000027367 Fkbp15Q6P9Q6 1216 aaKnown RBP28.73■■■□□ 2.19
Ctdsp1-201ENSMUST00000027367 Mphosph9A6H5Y1 991 aa28.73■■■□□ 2.19
Ctdsp1-201ENSMUST00000027367 Kdm3bQ6ZPY7 1562 aa28.7■■■□□ 2.18
Ctdsp1-201ENSMUST00000027367 Nop58Q6DFW4 536 aaKnown RBP28.69■■■□□ 2.18
Ctdsp1-201ENSMUST00000027367 Setbp1Q9Z180 1582 aa28.68■■■□□ 2.18
Ctdsp1-201ENSMUST00000027367 Zfp644E9QA22 1323 aa28.68■■■□□ 2.18
Ctdsp1-201ENSMUST00000027367 Il16O54824 1322 aa28.68■■■□□ 2.18
Ctdsp1-201ENSMUST00000027367 Gm38655A0A286YDK6 273 aa28.68■■■□□ 2.18
Ctdsp1-201ENSMUST00000027367 Naip5Q9R016 1403 aa28.66■■■□□ 2.18
Ctdsp1-201ENSMUST00000027367 Adgrb2Q8CGM1 1561 aa28.65■■■□□ 2.18
Ctdsp1-201ENSMUST00000027367 Mlh3A0A1Y7VMP7 1443 aa28.63■■■□□ 2.17
Ctdsp1-201ENSMUST00000027367 Tdrd9Q14BI7 1383 aa28.63■■■□□ 2.17
Ctdsp1-201ENSMUST00000027367 Fancd2Q80V62 1450 aa28.61■■■□□ 2.17
Ctdsp1-201ENSMUST00000027367 Camsap2Q8C1B1 1461 aa28.58■■■□□ 2.17
Ctdsp1-201ENSMUST00000027367 Gm14025A2AP89 1413 aa28.57■■■□□ 2.16
Ctdsp1-201ENSMUST00000027367 Caskin1Q6P9K8 1431 aa28.57■■■□□ 2.16
Ctdsp1-201ENSMUST00000027367 AlkP97793 1621 aa28.56■■■□□ 2.16
Ctdsp1-201ENSMUST00000027367 Fam208aQ69ZR9 1610 aaKnown RBP28.54■■■□□ 2.16
Ctdsp1-201ENSMUST00000027367 Pkd2O35245 966 aa28.52■■■□□ 2.16
Ctdsp1-201ENSMUST00000027367 Gm13697A2AK42 830 aa28.52■■■□□ 2.16
Ctdsp1-201ENSMUST00000027367 Lamc1P02468 1607 aaKnown RBP28.52■■■□□ 2.16
Ctdsp1-201ENSMUST00000027367 Abcc1O35379 1528 aa28.48■■■□□ 2.15
Ctdsp1-201ENSMUST00000027367 Kif21bQ9QXL1 1668 aa28.47■■■□□ 2.15
Ctdsp1-201ENSMUST00000027367 Chd1P40201 1711 aa28.47■■■□□ 2.15
Ctdsp1-201ENSMUST00000027367 Mapk8ip2Q9ERE9 830 aa28.46■■■□□ 2.15
Ctdsp1-201ENSMUST00000027367 Usp47Q8BY87 1376 aa28.46■■■□□ 2.15
Ctdsp1-201ENSMUST00000027367 Rprd2Q6NXI6 1469 aaKnown RBP28.45■■■□□ 2.15
Ctdsp1-201ENSMUST00000027367 Fam71e1A1L3C1 212 aa28.42■■■□□ 2.14
Ctdsp1-201ENSMUST00000027367 PrkcshO08795 521 aa28.39■■■□□ 2.13
Ctdsp1-201ENSMUST00000027367 Supt6hQ62383 1726 aaKnown RBP28.39■■■□□ 2.13
Ctdsp1-201ENSMUST00000027367 Fmn2Q9JL04 1578 aa28.38■■■□□ 2.13
Ctdsp1-201ENSMUST00000027367 Arhgap5P97393 1501 aa28.38■■■□□ 2.13
Ctdsp1-201ENSMUST00000027367 NhsB1AV60 1647 aa28.37■■■□□ 2.13
Ctdsp1-201ENSMUST00000027367 Rnf17Q99MV7 1640 aa28.36■■■□□ 2.13
Ctdsp1-201ENSMUST00000027367 Pik3c2gO70167 1506 aa28.36■■■□□ 2.13
Ctdsp1-201ENSMUST00000027367 Ttll5Q8CHB8 1328 aa28.35■■■□□ 2.13
Ctdsp1-201ENSMUST00000027367 Gm32742A0A1B0GT42 1604 aa28.34■■■□□ 2.13
Ctdsp1-201ENSMUST00000027367 Trpm2Q91YD4 1506 aa28.33■■■□□ 2.13
Ctdsp1-201ENSMUST00000027367 Sin3aQ60520 1274 aaKnown RBP28.33■■■□□ 2.13
Ctdsp1-201ENSMUST00000027367 Kiaa1210E9Q0C6 1637 aa28.32■■■□□ 2.12
Ctdsp1-201ENSMUST00000027367 Dhx9O70133 1380 aaKnown RBP28.3■■■□□ 2.12
Ctdsp1-201ENSMUST00000027367 Nup155Q99P88 1391 aaKnown RBP28.3■■■□□ 2.12
Ctdsp1-201ENSMUST00000027367 Trappc8E9PWG2 1437 aa28.3■■■□□ 2.12
Ctdsp1-201ENSMUST00000027367 Pdcd11Q6NS46 1862 aaKnown RBP28.27■■■□□ 2.12
Ctdsp1-201ENSMUST00000027367 Trak1Q6PD31 939 aa28.27■■■□□ 2.12
Ctdsp1-201ENSMUST00000027367 Adgrl2Q8JZZ7 1487 aa28.26■■■□□ 2.12
Ctdsp1-201ENSMUST00000027367 Wdr7Q920I9 1489 aa28.26■■■□□ 2.12
Ctdsp1-201ENSMUST00000027367 Pprc1Q6NZN1 1644 aa28.24■■■□□ 2.11
Ctdsp1-201ENSMUST00000027367 Kif14L0N7N1 1674 aaKnown RBP28.23■■■□□ 2.11
Ctdsp1-201ENSMUST00000027367 Cfap74Q3UY96 1578 aa28.22■■■□□ 2.11
Ctdsp1-201ENSMUST00000027367 Atp10dQ8K2X1 1416 aa28.22■■■□□ 2.11
Ctdsp1-201ENSMUST00000027367 Abca8bQ8K440 1620 aa28.22■■■□□ 2.11
Ctdsp1-201ENSMUST00000027367 Map4P27546 1125 aaKnown RBP28.21■■■□□ 2.11
Ctdsp1-201ENSMUST00000027367 Sart1Q9Z315 806 aaKnown RBP28.21■■■□□ 2.11
Ctdsp1-201ENSMUST00000027367 Rrp7aQ9D1C9 280 aaKnown RBP28.21■■■□□ 2.11
Ctdsp1-201ENSMUST00000027367 Lrrc9Q8CDN9 1456 aa28.2■■■□□ 2.1
Ctdsp1-201ENSMUST00000027367 Mast1Q9R1L5 1570 aa28.2■■■□□ 2.1
Ctdsp1-201ENSMUST00000027367 Ssh2Q5SW75 1423 aa28.18■■■□□ 2.1
Ctdsp1-201ENSMUST00000027367 Znf608Q56A10 1511 aa28.14■■■□□ 2.1
Ctdsp1-201ENSMUST00000027367 Rgl3Q3UYI5 709 aa28.14■■■□□ 2.1
Ctdsp1-201ENSMUST00000027367 Abcc3B2RX12 1523 aa28.13■■■□□ 2.09
Ctdsp1-201ENSMUST00000027367 Ythdc2B2RR83 1445 aaKnown RBP28.12■■■□□ 2.09
Ctdsp1-201ENSMUST00000027367 Neurl4Q5NCX5 1563 aa28.12■■■□□ 2.09
Ctdsp1-201ENSMUST00000027367 Hecw1Q8K4P8 1604 aa28.12■■■□□ 2.09
Ctdsp1-201ENSMUST00000027367 Ifnlr1Q8CGK5 535 aa28.12■■■□□ 2.09
Ctdsp1-201ENSMUST00000027367 Zbtb7cQ8VCZ7 619 aa28.11■■■□□ 2.09
Ctdsp1-201ENSMUST00000027367 Cdc42bpbQ7TT50 1713 aa28.1■■■□□ 2.09
Ctdsp1-201ENSMUST00000027367 Asxl1P59598 1514 aa28.09■■■□□ 2.09
Ctdsp1-201ENSMUST00000027367 Igf1rQ60751 1373 aa28.08■■■□□ 2.09
Ctdsp1-201ENSMUST00000027367 PtprgQ05909 1442 aa28.07■■■□□ 2.08
Ctdsp1-201ENSMUST00000027367 DroshaQ5HZJ0 1373 aaKnown RBP28.06■■■□□ 2.08
Ctdsp1-201ENSMUST00000027367 Mbd5B1AYB6 1498 aa28.06■■■□□ 2.08
Ctdsp1-201ENSMUST00000027367 Clstn2Q9ER65 966 aa28.05■■■□□ 2.08
Ctdsp1-201ENSMUST00000027367 Pelp1Q9DBD5 1123 aaKnown RBP28.05■■■□□ 2.08
Ctdsp1-201ENSMUST00000027367 Ncoa1P70365 1447 aa28.05■■■□□ 2.08
Ctdsp1-201ENSMUST00000027367 PtprtQ99M80 1454 aa28.03■■■□□ 2.08
Ctdsp1-201ENSMUST00000027367 Kidins220E9Q9B7 1793 aa28.01■■■□□ 2.07
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms