RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A YCR007CP25354 239 aa2.82□□□□□ -1.96
YOR343W-AYOR343W-A YCR022CP25620 114 aa2.82□□□□□ -1.96
YOR343W-AYOR343W-A PMU1P36069 295 aa2.82□□□□□ -1.96
YOR343W-AYOR343W-A IDP2P41939 412 aa2.82□□□□□ -1.96
YOR343W-AYOR343W-A DUO1P53168 247 aaKnown RBP2.82□□□□□ -1.96
YOR343W-AYOR343W-A NGL3Q03210 505 aa2.82□□□□□ -1.96
YOR343W-AYOR343W-A ADD37Q03233 198 aa2.82□□□□□ -1.96
YOR343W-AYOR343W-A SLD5Q03406 294 aa2.82□□□□□ -1.96
YOR343W-AYOR343W-A MRPL51Q06090 140 aaPredicted RBP2.82□□□□□ -1.96
YOR343W-AYOR343W-A NOP58Q12499 511 aaKnown RBP2.82□□□□□ -1.96
YOR343W-AYOR343W-A YBR126W-AQ8TGU7 68 aa2.82□□□□□ -1.96
YOR343W-AYOR343W-A ATR1P13090 542 aa2.81□□□□□ -1.96
YOR343W-AYOR343W-A PUT3P25502 979 aaPredicted RBP2.81□□□□□ -1.96
YOR343W-AYOR343W-A DPB3P27344 201 aa2.81□□□□□ -1.96
YOR343W-AYOR343W-A SSH4P32343 579 aa2.81□□□□□ -1.96
YOR343W-AYOR343W-A MCM10P32354 571 aa2.81□□□□□ -1.96
YOR343W-AYOR343W-A SAC6P32599 642 aaKnown RBP2.81□□□□□ -1.96
YOR343W-AYOR343W-A MUD2P36084 527 aaKnown RBP2.81□□□□□ -1.96
YOR343W-AYOR343W-A TUL1P36096 758 aa2.81□□□□□ -1.96
YOR343W-AYOR343W-A NPR2P39923 615 aa2.81□□□□□ -1.96
YOR343W-AYOR343W-A SHO1P40073 367 aa2.81□□□□□ -1.96
YOR343W-AYOR343W-A COQ9Q05779 260 aa2.81□□□□□ -1.96
YOR343W-AYOR343W-A YCL021W-AQ96VH3 125 aa2.81□□□□□ -1.96
YOR343W-AYOR343W-A HSH49Q99181 213 aaPredicted RBP2.81□□□□□ -1.96
YOR343W-AYOR343W-A ART10P18634 518 aaKnown RBP2.8□□□□□ -1.96
YOR343W-AYOR343W-A YBP1P38315 674 aa2.8□□□□□ -1.96
YOR343W-AYOR343W-A ALG8P40351 577 aa2.8□□□□□ -1.96
YOR343W-AYOR343W-A WSC2P53832 503 aa2.8□□□□□ -1.96
YOR343W-AYOR343W-A BSC6Q08280 497 aa2.8□□□□□ -1.96
YOR343W-AYOR343W-A LSP1Q12230 341 aaKnown RBP2.8□□□□□ -1.96
YOR343W-AYOR343W-A SUC2P00724 532 aa2.79□□□□□ -1.96
YOR343W-AYOR343W-A EST1P17214 699 aaPredicted RBP2.79□□□□□ -1.96
YOR343W-AYOR343W-A RNA14P25298 677 aaKnown RBP2.79□□□□□ -1.96
YOR343W-AYOR343W-A PAH1P32567 862 aa2.79□□□□□ -1.96
YOR343W-AYOR343W-A SEF1P34228 1148 aa2.79□□□□□ -1.96
YOR343W-AYOR343W-A TIF4631P39935 952 aaKnown RBP2.79□□□□□ -1.96
YOR343W-AYOR343W-A HAT2P39984 401 aa2.79□□□□□ -1.96
YOR343W-AYOR343W-A ALK1P43633 760 aaKnown RBP2.79□□□□□ -1.96
YOR343W-AYOR343W-A AIM22P47051 409 aa2.79□□□□□ -1.96
YOR343W-AYOR343W-A IPI3P53877 555 aa2.79□□□□□ -1.96
YOR343W-AYOR343W-A PHO92Q06390 306 aa2.79□□□□□ -1.96
YOR343W-AYOR343W-A THP1Q08231 455 aa2.79□□□□□ -1.96
YOR343W-AYOR343W-A HUA2Q12134 243 aa2.79□□□□□ -1.96
YOR343W-AYOR343W-A YPT6Q99260 215 aa2.79□□□□□ -1.96
YOR343W-AYOR343W-A ELO2P25358 347 aa2.78□□□□□ -1.96
YOR343W-AYOR343W-A UTR4P32626 227 aa2.78□□□□□ -1.96
YOR343W-AYOR343W-A BNA4P38169 460 aa2.78□□□□□ -1.96
YOR343W-AYOR343W-A ALG5P40350 334 aa2.78□□□□□ -1.96
YOR343W-AYOR343W-A IMD4P50094 524 aaKnown RBP2.78□□□□□ -1.96
YOR343W-AYOR343W-A VID30P53076 958 aa2.78□□□□□ -1.96
YOR343W-AYOR343W-A MSO1P53604 210 aaKnown RBP2.78□□□□□ -1.96
YOR343W-AYOR343W-A IRC15Q02733 499 aa2.78□□□□□ -1.96
YOR343W-AYOR343W-A VPS74Q06385 345 aa2.78□□□□□ -1.96
YOR343W-AYOR343W-A CFT2Q12102 859 aaPredicted RBP2.78□□□□□ -1.96
YOR343W-AYOR343W-A PMR1P13586 950 aa2.77□□□□□ -1.97
YOR343W-AYOR343W-A MSN2P33748 704 aa2.77□□□□□ -1.97
YOR343W-AYOR343W-A SHP1P34223 423 aa2.77□□□□□ -1.97
YOR343W-AYOR343W-A FLC2P39719 783 aa2.77□□□□□ -1.97
YOR343W-AYOR343W-A GWT1P47026 490 aa2.77□□□□□ -1.97
YOR343W-AYOR343W-A GPI1P53306 609 aa2.77□□□□□ -1.97
YOR343W-AYOR343W-A YEH1Q07804 573 aa2.77□□□□□ -1.97
YOR343W-AYOR343W-A NMD4Q12129 218 aa2.77□□□□□ -1.97
YOR343W-AYOR343W-A CTF3Q12748 733 aa2.77□□□□□ -1.97
YOR343W-AYOR343W-A EXO70P19658 623 aa2.76□□□□□ -1.97
YOR343W-AYOR343W-A RFS1P38234 210 aaKnown RBP2.76□□□□□ -1.97
YOR343W-AYOR343W-A ELP2P42935 788 aa2.76□□□□□ -1.97
YOR343W-AYOR343W-A YGL242CP53066 181 aa2.76□□□□□ -1.97
YOR343W-AYOR343W-A TOF2Q02208 771 aa2.76□□□□□ -1.97
YOR343W-AYOR343W-A RPC11Q04307 110 aaPredicted RBP2.76□□□□□ -1.97
YOR343W-AYOR343W-A RBS1Q05672 457 aaKnown RBP2.76□□□□□ -1.97
YOR343W-AYOR343W-A HNT3Q08702 217 aa2.76□□□□□ -1.97
YOR343W-AYOR343W-A RLM1Q12224 676 aa2.76□□□□□ -1.97
YOR343W-AYOR343W-A SEM1O94742 89 aa2.75□□□□□ -1.97
YOR343W-AYOR343W-A AAC3P18238 307 aa2.75□□□□□ -1.97
YOR343W-AYOR343W-A TCD2P36101 447 aaKnown RBP2.75□□□□□ -1.97
YOR343W-AYOR343W-A DUG2P38149 878 aa2.75□□□□□ -1.97
YOR343W-AYOR343W-A TCM62P38228 572 aaKnown RBP2.75□□□□□ -1.97
YOR343W-AYOR343W-A PRE5P40302 234 aaKnown RBP2.75□□□□□ -1.97
YOR343W-AYOR343W-A RBG2P53295 368 aaKnown RBP2.75□□□□□ -1.97
YOR343W-AYOR343W-A HEF3P53978 1044 aaKnown RBP2.75□□□□□ -1.97
YOR343W-AYOR343W-A YER078W-AQ3E7A2 54 aa2.75□□□□□ -1.97
YOR343W-AYOR343W-A MES1P00958 751 aaKnown RBP2.74□□□□□ -1.97
YOR343W-AYOR343W-A SEC53P07283 254 aaKnown RBP2.74□□□□□ -1.97
YOR343W-AYOR343W-A CPR1P14832 162 aaKnown RBP2.74□□□□□ -1.97
YOR343W-AYOR343W-A HSC82P15108 705 aaKnown RBP2.74□□□□□ -1.97
YOR343W-AYOR343W-A FUN19P28003 413 aaPredicted RBP2.74□□□□□ -1.97
YOR343W-AYOR343W-A PAP1P29468 568 aaKnown RBP2.74□□□□□ -1.97
YOR343W-AYOR343W-A MSR1P38714 643 aa2.74□□□□□ -1.97
YOR343W-AYOR343W-A SGN1P40561 250 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
YOR343W-AYOR343W-A KEL3Q08979 651 aaPredicted RBP2.74□□□□□ -1.97
YOR343W-AYOR343W-A RKM5Q12367 367 aa2.74□□□□□ -1.97
YOR343W-AYOR343W-A YJR112W-AQ3E743 109 aa2.74□□□□□ -1.97
YOR343W-AYOR343W-A RAV1P47104 1357 aa2.74□□□□□ -1.97
YOR343W-AYOR343W-A COR1P07256 457 aa2.73□□□□□ -1.97
YOR343W-AYOR343W-A LPD1P09624 499 aaKnown RBP2.73□□□□□ -1.97
YOR343W-AYOR343W-A PRD1P25375 712 aa2.73□□□□□ -1.97
YOR343W-AYOR343W-A ATP11P32453 318 aa2.73□□□□□ -1.97
YOR343W-AYOR343W-A REG2P38232 338 aa2.73□□□□□ -1.97
YOR343W-AYOR343W-A MUM2P38236 366 aa2.73□□□□□ -1.97
YOR343W-AYOR343W-A RRT2P38332 387 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms