RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W NPR2P39923 615 aa4.03□□□□□ -1.76
SSU72YNL222W IVY1Q04934 453 aa4.03□□□□□ -1.76
SSU72YNL222W COQ9Q05779 260 aa4.03□□□□□ -1.76
SSU72YNL222W BNA5Q05979 453 aa4.03□□□□□ -1.76
SSU72YNL222W HSH49Q99181 213 aaPredicted RBP4.03□□□□□ -1.76
SSU72YNL222W ART10P18634 518 aaKnown RBP4.02□□□□□ -1.77
SSU72YNL222W PAH1P32567 862 aa4.01□□□□□ -1.77
SSU72YNL222W PMU1P36069 295 aa4.01□□□□□ -1.77
SSU72YNL222W SHO1P40073 367 aa4.01□□□□□ -1.77
SSU72YNL222W YJL132WP47014 750 aa4.01□□□□□ -1.77
SSU72YNL222W RPC11Q04307 110 aaPredicted RBP4.01□□□□□ -1.77
SSU72YNL222W MRPL51Q06090 140 aaPredicted RBP4.01□□□□□ -1.77
SSU72YNL222W YPT6Q99260 215 aa4.01□□□□□ -1.77
SSU72YNL222W YCR007CP25354 239 aa4□□□□□ -1.77
SSU72YNL222W SEF1P34228 1148 aa4□□□□□ -1.77
SSU72YNL222W TIF5P38431 405 aaKnown RBP4□□□□□ -1.77
SSU72YNL222W ALG5P40350 334 aa4□□□□□ -1.77
SSU72YNL222W IMD4P50094 524 aaKnown RBP4□□□□□ -1.77
SSU72YNL222W WSC2P53832 503 aa4□□□□□ -1.77
SSU72YNL222W PHO92Q06390 306 aa4□□□□□ -1.77
SSU72YNL222W THP1Q08231 455 aa4□□□□□ -1.77
SSU72YNL222W SUC2P00724 532 aa3.99□□□□□ -1.77
SSU72YNL222W ELO2P25358 347 aa3.99□□□□□ -1.77
SSU72YNL222W SAC6P32599 642 aaKnown RBP3.99□□□□□ -1.77
SSU72YNL222W TUL1P36096 758 aa3.99□□□□□ -1.77
SSU72YNL222W FLC2P39719 783 aa3.99□□□□□ -1.77
SSU72YNL222W IDP2P41939 412 aa3.99□□□□□ -1.77
SSU72YNL222W AIM22P47051 409 aa3.99□□□□□ -1.77
SSU72YNL222W VID30P53076 958 aa3.99□□□□□ -1.77
SSU72YNL222W TOF2Q02208 771 aa3.99□□□□□ -1.77
SSU72YNL222W YEH1Q07804 573 aa3.99□□□□□ -1.77
SSU72YNL222W NMD4Q12129 218 aa3.99□□□□□ -1.77
SSU72YNL222W ATR1P13090 542 aa3.98□□□□□ -1.77
SSU72YNL222W SHP1P34223 423 aa3.98□□□□□ -1.77
SSU72YNL222W TIF4631P39935 952 aaKnown RBP3.98□□□□□ -1.77
SSU72YNL222W ALG8P40351 577 aa3.98□□□□□ -1.77
SSU72YNL222W SPG5P42933 373 aa3.98□□□□□ -1.77
SSU72YNL222W RPS0BP46654 252 aaKnown RBP3.98□□□□□ -1.77
SSU72YNL222W IRC15Q02733 499 aa3.98□□□□□ -1.77
SSU72YNL222W LSP1Q12230 341 aaKnown RBP3.98□□□□□ -1.77
SSU72YNL222W SEC53P07283 254 aaKnown RBP3.97□□□□□ -1.77
SSU72YNL222W AAC3P18238 307 aa3.97□□□□□ -1.77
SSU72YNL222W PUT3P25502 979 aaPredicted RBP3.97□□□□□ -1.77
SSU72YNL222W UTR4P32626 227 aa3.97□□□□□ -1.77
SSU72YNL222W MSN2P33748 704 aa3.97□□□□□ -1.77
SSU72YNL222W BNA4P38169 460 aa3.97□□□□□ -1.77
SSU72YNL222W HAT2P39984 401 aa3.97□□□□□ -1.77
SSU72YNL222W VID27P40157 782 aa3.97□□□□□ -1.77
SSU72YNL222W SGN1P40561 250 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
SSU72YNL222W YPI1P43587 155 aa3.97□□□□□ -1.77
SSU72YNL222W ALK1P43633 760 aaKnown RBP3.97□□□□□ -1.77
SSU72YNL222W YDR056CQ12025 205 aa3.97□□□□□ -1.77
SSU72YNL222W RLM1Q12224 676 aa3.97□□□□□ -1.77
SSU72YNL222W ENT1Q12518 454 aa3.97□□□□□ -1.77
SSU72YNL222W YCL021W-AQ96VH3 125 aa3.97□□□□□ -1.77
SSU72YNL222W REV1P12689 985 aa3.96□□□□□ -1.78
SSU72YNL222W TCD2P36101 447 aaKnown RBP3.96□□□□□ -1.78
SSU72YNL222W DUG2P38149 878 aa3.96□□□□□ -1.78
SSU72YNL222W TCM62P38228 572 aaKnown RBP3.96□□□□□ -1.78
SSU72YNL222W YBP1P38315 674 aa3.96□□□□□ -1.78
SSU72YNL222W MSR1P38714 643 aa3.96□□□□□ -1.78
SSU72YNL222W GPI1P53306 609 aa3.96□□□□□ -1.78
SSU72YNL222W SMA2Q04658 369 aa3.96□□□□□ -1.78
SSU72YNL222W VPS74Q06385 345 aa3.96□□□□□ -1.78
SSU72YNL222W CTF3Q12748 733 aa3.96□□□□□ -1.78
SSU72YNL222W GWT1P47026 490 aa3.95□□□□□ -1.78
SSU72YNL222W UPF3P48412 387 aaKnown RBP3.95□□□□□ -1.78
SSU72YNL222W CFT2Q12102 859 aaPredicted RBP3.95□□□□□ -1.78
SSU72YNL222W SEM1O94742 89 aa3.94□□□□□ -1.78
SSU72YNL222W MES1P00958 751 aaKnown RBP3.94□□□□□ -1.78
SSU72YNL222W EXO70P19658 623 aa3.94□□□□□ -1.78
SSU72YNL222W RNA14P25298 677 aaKnown RBP3.94□□□□□ -1.78
SSU72YNL222W NOP16P40007 231 aaKnown RBP3.94□□□□□ -1.78
SSU72YNL222W ELP2P42935 788 aa3.94□□□□□ -1.78
SSU72YNL222W MRX6P48564 524 aa3.94□□□□□ -1.78
SSU72YNL222W RBG2P53295 368 aaKnown RBP3.94□□□□□ -1.78
SSU72YNL222W ZPR1P53303 486 aaKnown RBP3.94□□□□□ -1.78
SSU72YNL222W HEF3P53978 1044 aaKnown RBP3.94□□□□□ -1.78
SSU72YNL222W RBS1Q05672 457 aaKnown RBP3.94□□□□□ -1.78
SSU72YNL222W RCN2Q12044 265 aa3.94□□□□□ -1.78
SSU72YNL222W RKM5Q12367 367 aa3.94□□□□□ -1.78
SSU72YNL222W PAP1P29468 568 aaKnown RBP3.93□□□□□ -1.78
SSU72YNL222W SWH1P35845 1188 aa3.93□□□□□ -1.78
SSU72YNL222W REG2P38232 338 aa3.93□□□□□ -1.78
SSU72YNL222W MSO1P53604 210 aaKnown RBP3.93□□□□□ -1.78
SSU72YNL222W HNT3Q08702 217 aa3.93□□□□□ -1.78
SSU72YNL222W CTI6Q08923 506 aa3.93□□□□□ -1.78
SSU72YNL222W YJR112W-AQ3E743 109 aa3.93□□□□□ -1.78
SSU72YNL222W GAL80P04387 435 aa3.92□□□□□ -1.78
SSU72YNL222W COR1P07256 457 aa3.92□□□□□ -1.78
SSU72YNL222W PMR1P13586 950 aa3.92□□□□□ -1.78
SSU72YNL222W FUN19P28003 413 aaPredicted RBP3.92□□□□□ -1.78
SSU72YNL222W YME1P32795 747 aa3.92□□□□□ -1.78
SSU72YNL222W VPS38Q05919 439 aa3.92□□□□□ -1.78
SSU72YNL222W CBS1P14066 229 aa3.91□□□□□ -1.78
SSU72YNL222W CPR1P14832 162 aaKnown RBP3.91□□□□□ -1.78
SSU72YNL222W GLK1P17709 500 aaKnown RBP3.91□□□□□ -1.78
SSU72YNL222W PRP2P20095 876 aaPredicted RBP3.91□□□□□ -1.78
SSU72YNL222W PEP3P27801 918 aa3.91□□□□□ -1.78
SSU72YNL222W SVL3Q03088 825 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 127.7 ms