RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	ADE4	P04046	510 aa	Known RBP	5.51	□□□□□ -1.53
SKG1	YKR100C	ATP4	P05626	244 aa		5.51	□□□□□ -1.53
SKG1	YKR100C	YKL050C	P35736	922 aa		5.51	□□□□□ -1.53
SKG1	YKR100C	UBP13	P38187	747 aa		5.51	□□□□□ -1.53
SKG1	YKR100C	TIF5	P38431	405 aa	Known RBP	5.51	□□□□□ -1.53
SKG1	YKR100C	YJR061W	P40355	935 aa		5.51	□□□□□ -1.53
SKG1	YKR100C	YGL260W	P53056	76 aa		5.51	□□□□□ -1.53
SKG1	YKR100C	BET4	Q00618	327 aa		5.51	□□□□□ -1.53
SKG1	YKR100C	ARP9	Q05123	467 aa		5.51	□□□□□ -1.53
SKG1	YKR100C	SWA2	Q06677	668 aa		5.51	□□□□□ -1.53
SKG1	YKR100C	HIF1	Q12373	385 aa		5.51	□□□□□ -1.53
SKG1	YKR100C	PPH22	P23595	377 aa		5.5	□□□□□ -1.53
SKG1	YKR100C	DCP2	P53550	970 aa	Known RBP	5.5	□□□□□ -1.53
SKG1	YKR100C	ESBP6	P53918	673 aa		5.5	□□□□□ -1.53
SKG1	YKR100C	ADA2	Q02336	434 aa		5.5	□□□□□ -1.53
SKG1	YKR100C	MRD1	Q06106	887 aa	Known RBP	5.5	□□□□□ -1.53
SKG1	YKR100C	RRP6	Q12149	733 aa	Known RBP	5.5	□□□□□ -1.53
SKG1	YKR100C	RML2	P32611	393 aa		5.49	□□□□□ -1.53
SKG1	YKR100C	OSW5	P40219	148 aa		5.49	□□□□□ -1.53
SKG1	YKR100C	FET5	P43561	622 aa		5.49	□□□□□ -1.53
SKG1	YKR100C	ECI1	Q05871	280 aa		5.49	□□□□□ -1.53
SKG1	YKR100C	YOL024W	Q08172	172 aa		5.49	□□□□□ -1.53
SKG1	YKR100C	NUC1	P08466	329 aa		5.48	□□□□□ -1.53
SKG1	YKR100C	NCP1	P16603	691 aa	Known RBP	5.48	□□□□□ -1.53
SKG1	YKR100C	RAD24	P32641	659 aa		5.48	□□□□□ -1.53
SKG1	YKR100C	CCT4	P39078	528 aa	Known RBP	5.48	□□□□□ -1.53
SKG1	YKR100C	YND1	P40009	630 aa		5.48	□□□□□ -1.53
SKG1	YKR100C	TIF34	P40217	347 aa	Known RBP	5.48	□□□□□ -1.53
SKG1	YKR100C	TDA7	P53882	636 aa	Predicted RBP	5.48	□□□□□ -1.53
SKG1	YKR100C	IGO1	P53897	168 aa		5.48	□□□□□ -1.53
SKG1	YKR100C	ASI1	P54074	624 aa		5.48	□□□□□ -1.53
SKG1	YKR100C	RKM5	Q12367	367 aa		5.48	□□□□□ -1.53
SKG1	YKR100C	ATP2	P00830	511 aa	Known RBP	5.47	□□□□□ -1.53
SKG1	YKR100C	CHO1	P08456	276 aa		5.47	□□□□□ -1.53
SKG1	YKR100C	SRP54	P20424	541 aa	Known RBP	5.47	□□□□□ -1.53
SKG1	YKR100C	PRO3	P32263	286 aa	Known RBP	5.47	□□□□□ -1.53
SKG1	YKR100C	PFS1	P38872	237 aa		5.47	□□□□□ -1.53
SKG1	YKR100C	YIL161W	P40449	235 aa	Known RBP	5.47	□□□□□ -1.53
SKG1	YKR100C	MTF1	P14908	341 aa	Known RBP	5.46	□□□□□ -1.54
SKG1	YKR100C	STE50	P25344	346 aa		5.46	□□□□□ -1.54
SKG1	YKR100C	YJL070C	P40361	888 aa		5.46	□□□□□ -1.54
SKG1	YKR100C	NUP84	P52891	726 aa		5.46	□□□□□ -1.54
SKG1	YKR100C	PFA5	Q03289	374 aa		5.46	□□□□□ -1.54
SKG1	YKR100C	PDS5	Q04264	1277 aa		5.46	□□□□□ -1.54
SKG1	YKR100C	YLR281C	Q05863	155 aa		5.46	□□□□□ -1.54
SKG1	YKR100C	GPN2	Q08726	347 aa	Predicted RBP	5.46	□□□□□ -1.54
SKG1	YKR100C	APL5	Q08951	932 aa	Known RBP	5.46	□□□□□ -1.54
SKG1	YKR100C	YPQ1	Q12010	308 aa		5.46	□□□□□ -1.54
SKG1	YKR100C	YOR111W	Q99210	232 aa		5.46	□□□□□ -1.54
SKG1	YKR100C	PET111	P08468	800 aa		5.45	□□□□□ -1.54
SKG1	YKR100C	SPO16	P17122	198 aa		5.45	□□□□□ -1.54
SKG1	YKR100C	NUP120	P35729	1037 aa		5.45	□□□□□ -1.54
SKG1	YKR100C	RPT2	P40327	437 aa	Known RBP	5.45	□□□□□ -1.54
SKG1	YKR100C	FMP42	Q04991	504 aa		5.45	□□□□□ -1.54
SKG1	YKR100C	CRN1	Q06440	651 aa		5.45	□□□□□ -1.54
SKG1	YKR100C	YDR061W	Q12298	539 aa		5.45	□□□□□ -1.54
SKG1	YKR100C	COX3	P00420	269 aa		5.44	□□□□□ -1.54
SKG1	YKR100C	PHO81	P17442	1178 aa		5.44	□□□□□ -1.54
SKG1	YKR100C	GLN3	P18494	730 aa		5.44	□□□□□ -1.54
SKG1	YKR100C	RKM3	P38222	552 aa		5.44	□□□□□ -1.54
SKG1	YKR100C	RTT107	P38850	1070 aa		5.44	□□□□□ -1.54
SKG1	YKR100C	VRG4	P40107	337 aa		5.44	□□□□□ -1.54
SKG1	YKR100C	YMR254C	Q04838	102 aa		5.44	□□□□□ -1.54
SKG1	YKR100C	RTT109	Q07794	436 aa		5.44	□□□□□ -1.54
SKG1	YKR100C	TMS1	Q12116	473 aa		5.44	□□□□□ -1.54
SKG1	YKR100C	BEM1	P29366	551 aa		5.43	□□□□□ -1.54
SKG1	YKR100C	LHS1	P36016	881 aa		5.43	□□□□□ -1.54
SKG1	YKR100C	AAP1	P37898	856 aa	Known RBP	5.43	□□□□□ -1.54
SKG1	YKR100C	EFM2	P38347	419 aa		5.43	□□□□□ -1.54
SKG1	YKR100C	HOS2	P53096	452 aa	Predicted RBP	5.43	□□□□□ -1.54
SKG1	YKR100C	BNA5	Q05979	453 aa		5.43	□□□□□ -1.54
SKG1	YKR100C	UTP21	Q06078	939 aa	Predicted RBP	5.43	□□□□□ -1.54
SKG1	YKR100C	RPN8	Q08723	338 aa	Known RBP	5.43	□□□□□ -1.54
SKG1	YKR100C	COX17	Q12287	69 aa		5.43	□□□□□ -1.54
SKG1	YKR100C	RAD3	P06839	778 aa		5.42	□□□□□ -1.54
SKG1	YKR100C	MSF1	P08425	469 aa		5.42	□□□□□ -1.54
SKG1	YKR100C	MRX1	P40050	688 aa		5.42	□□□□□ -1.54
SKG1	YKR100C	BTT1	P40314	149 aa	Predicted RBP	5.42	□□□□□ -1.54
SKG1	YKR100C	YCL049C	P25577	312 aa		5.41	□□□□□ -1.54
SKG1	YKR100C	ATG15	P25641	520 aa		5.41	□□□□□ -1.54
SKG1	YKR100C	NTR2	P36118	322 aa	Predicted RBP	5.41	□□□□□ -1.54
SKG1	YKR100C	NPR3	P38742	1146 aa		5.41	□□□□□ -1.54
SKG1	YKR100C	ERG10	P41338	398 aa	Known RBP	5.41	□□□□□ -1.54
SKG1	YKR100C	SWP82	P43554	623 aa		5.41	□□□□□ -1.54
SKG1	YKR100C	ARC35	P53731	342 aa	Known RBP	5.41	□□□□□ -1.54
SKG1	YKR100C	YNL181W	P53878	407 aa		5.41	□□□□□ -1.54
SKG1	YKR100C	YMR317W	Q04893	1140 aa		5.41	□□□□□ -1.54
SKG1	YKR100C	CIA1	Q05583	330 aa		5.41	□□□□□ -1.54
SKG1	YKR100C	YTH1	Q06102	208 aa	Predicted RBP	5.41	□□□□□ -1.54
SKG1	YKR100C	DAL5	P15365	543 aa		5.4	□□□□□ -1.54
SKG1	YKR100C	APA1	P16550	321 aa	Known RBP	5.4	□□□□□ -1.54
SKG1	YKR100C	RAD16	P31244	790 aa		5.4	□□□□□ -1.54
SKG1	YKR100C	SOF1	P33750	489 aa	Known RBP	5.4	□□□□□ -1.54
SKG1	YKR100C	LSM4	P40070	187 aa	Known RBP	5.4	□□□□□ -1.54
SKG1	YKR100C	CTK2	P46962	323 aa		5.4	□□□□□ -1.54
SKG1	YKR100C	ASG7	P46993	209 aa		5.4	□□□□□ -1.54
SKG1	YKR100C	COQ5	P49017	307 aa		5.4	□□□□□ -1.54
SKG1	YKR100C	COG1	P53079	417 aa		5.4	□□□□□ -1.54
SKG1	YKR100C	ZPR1	P53303	486 aa	Known RBP	5.4	□□□□□ -1.54
SKG1	YKR100C	YNL234W	P53857	426 aa		5.4	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms