RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C HLJ1P48353 224 aa4.78□□□□□ -1.64
CAF4YKR036C OCA1P50946 238 aaPredicted RBP4.78□□□□□ -1.64
CAF4YKR036C MRH4P53166 561 aa4.78□□□□□ -1.64
CAF4YKR036C CUS2P53830 285 aaPredicted RBP4.78□□□□□ -1.64
CAF4YKR036C ELA1P53861 379 aaPredicted RBP4.78□□□□□ -1.64
CAF4YKR036C YNL134CP53912 376 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C YMR279CQ03263 540 aa4.78□□□□□ -1.64
CAF4YKR036C IVY1Q04934 453 aa4.78□□□□□ -1.64
CAF4YKR036C BSC2Q05611 235 aa4.78□□□□□ -1.64
CAF4YKR036C PDR8Q06149 701 aa4.78□□□□□ -1.64
CAF4YKR036C ARO10Q06408 635 aa4.78□□□□□ -1.64
CAF4YKR036C BRX1Q08235 291 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C PCD1Q12524 340 aa4.78□□□□□ -1.64
CAF4YKR036C YPL119C-AQ3E751 87 aa4.78□□□□□ -1.64
CAF4YKR036C BI3Q9ZZW7 517 aa4.78□□□□□ -1.64
CAF4YKR036C IMA3P0CW40 589 aa4.77□□□□□ -1.65
CAF4YKR036C IMA4P0CW41 589 aa4.77□□□□□ -1.65
CAF4YKR036C RPL3P14126 387 aaKnown RBP4.77□□□□□ -1.65
CAF4YKR036C RPL24BP24000 155 aaKnown RBP4.77□□□□□ -1.65
CAF4YKR036C YCL049CP25577 312 aa4.77□□□□□ -1.65
CAF4YKR036C APE2P32454 952 aaKnown RBP4.77□□□□□ -1.65
CAF4YKR036C ABD1P32783 436 aaPredicted RBP4.77□□□□□ -1.65
CAF4YKR036C PTC1P35182 281 aa4.77□□□□□ -1.65
CAF4YKR036C ARN2P38724 620 aa4.77□□□□□ -1.65
CAF4YKR036C ARN1P38731 627 aa4.77□□□□□ -1.65
CAF4YKR036C YHL026CP38740 315 aa4.77□□□□□ -1.65
CAF4YKR036C YAP1801P38856 637 aa4.77□□□□□ -1.65
CAF4YKR036C YHR218WP38899 603 aa4.77□□□□□ -1.65
CAF4YKR036C DSS1P39112 969 aa4.77□□□□□ -1.65
CAF4YKR036C GIP4P39732 760 aa4.77□□□□□ -1.65
CAF4YKR036C TPA1P40032 644 aaKnown RBP4.77□□□□□ -1.65
CAF4YKR036C YTA6P40328 754 aa4.77□□□□□ -1.65
CAF4YKR036C YJL049WP47048 450 aa4.77□□□□□ -1.65
CAF4YKR036C BIO3P50277 480 aa4.77□□□□□ -1.65
CAF4YKR036C ALT2P52892 507 aa4.77□□□□□ -1.65
CAF4YKR036C DAM1P53267 343 aa4.77□□□□□ -1.65
CAF4YKR036C SLI1P53304 468 aa4.77□□□□□ -1.65
CAF4YKR036C YNL095CP53932 642 aa4.77□□□□□ -1.65
CAF4YKR036C TIM8P57744 87 aa4.77□□□□□ -1.65
CAF4YKR036C RPA49Q01080 415 aaPredicted RBP4.77□□□□□ -1.65
CAF4YKR036C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
CAF4YKR036C FDC1Q03034 503 aa4.77□□□□□ -1.65
CAF4YKR036C SNX41Q04053 625 aa4.77□□□□□ -1.65
CAF4YKR036C BNA7Q04066 261 aa4.77□□□□□ -1.65
CAF4YKR036C MFB1Q04922 465 aa4.77□□□□□ -1.65
CAF4YKR036C IMA2Q08295 589 aa4.77□□□□□ -1.65
CAF4YKR036C YOL159CQ08300 171 aa4.77□□□□□ -1.65
CAF4YKR036C SYC1Q08553 188 aaPredicted RBP4.77□□□□□ -1.65
CAF4YKR036C RPN6Q12377 434 aa4.77□□□□□ -1.65
CAF4YKR036C PCK1P10963 549 aa4.76□□□□□ -1.65
CAF4YKR036C BAR1P12630 587 aa4.76□□□□□ -1.65
CAF4YKR036C RDS2P19541 446 aaKnown RBP4.76□□□□□ -1.65
CAF4YKR036C RAM1P22007 431 aa4.76□□□□□ -1.65
CAF4YKR036C FPS1P23900 669 aa4.76□□□□□ -1.65
CAF4YKR036C DAL2P25335 343 aa4.76□□□□□ -1.65
CAF4YKR036C ADK2P26364 225 aa4.76□□□□□ -1.65
CAF4YKR036C TMT1P32643 299 aa4.76□□□□□ -1.65
CAF4YKR036C LST4P34239 828 aa4.76□□□□□ -1.65
CAF4YKR036C CPR5P35176 225 aa4.76□□□□□ -1.65
CAF4YKR036C MCM7P38132 845 aa4.76□□□□□ -1.65
CAF4YKR036C ATG12P38316 186 aa4.76□□□□□ -1.65
CAF4YKR036C UBX7P38349 436 aa4.76□□□□□ -1.65
CAF4YKR036C TIF11P38912 153 aaKnown RBP4.76□□□□□ -1.65
CAF4YKR036C EDC3P39998 551 aaKnown RBP4.76□□□□□ -1.65
CAF4YKR036C SCC4P40090 624 aa4.76□□□□□ -1.65
CAF4YKR036C GID8P40208 455 aa4.76□□□□□ -1.65
CAF4YKR036C TMA108P40462 946 aa4.76□□□□□ -1.65
CAF4YKR036C TIR3P40552 269 aa4.76□□□□□ -1.65
CAF4YKR036C GTT1P40582 234 aa4.76□□□□□ -1.65
CAF4YKR036C HXT9P40885 567 aa4.76□□□□□ -1.65
CAF4YKR036C YFL052WP43551 465 aa4.76□□□□□ -1.65
CAF4YKR036C BST1P43571 1029 aa4.76□□□□□ -1.65
CAF4YKR036C BUD13P46947 266 aaPredicted RBP4.76□□□□□ -1.65
CAF4YKR036C HSH155P49955 971 aaKnown RBP4.76□□□□□ -1.65
CAF4YKR036C UBC12P52491 188 aa4.76□□□□□ -1.65
CAF4YKR036C GTF1P53260 183 aaPredicted RBP4.76□□□□□ -1.65
CAF4YKR036C GOR1P53839 350 aa4.76□□□□□ -1.65
CAF4YKR036C SPR6Q01684 191 aa4.76□□□□□ -1.65
CAF4YKR036C ROD1Q02805 837 aa4.76□□□□□ -1.65
CAF4YKR036C YDR541CQ03049 344 aa4.76□□□□□ -1.65
CAF4YKR036C APC4Q04601 652 aa4.76□□□□□ -1.65
CAF4YKR036C THI7Q05998 598 aa4.76□□□□□ -1.65
CAF4YKR036C YEH1Q07804 573 aa4.76□□□□□ -1.65
CAF4YKR036C LYS21Q12122 440 aaKnown RBP4.76□□□□□ -1.65
CAF4YKR036C YRM1Q12340 786 aa4.76□□□□□ -1.65
CAF4YKR036C RGS2Q99188 309 aa4.76□□□□□ -1.65
CAF4YKR036C PHO8P11491 566 aa4.76□□□□□ -1.65
CAF4YKR036C KAR1P11927 433 aa4.76□□□□□ -1.65
CAF4YKR036C MET16P18408 261 aaPredicted RBP4.76□□□□□ -1.65
CAF4YKR036C PRI2P20457 528 aa4.76□□□□□ -1.65
CAF4YKR036C NDI1P32340 513 aa4.76□□□□□ -1.65
CAF4YKR036C PET309P32522 965 aaPredicted RBP4.76□□□□□ -1.65
CAF4YKR036C CSG2P35206 410 aa4.76□□□□□ -1.65
CAF4YKR036C JEN1P36035 616 aa4.76□□□□□ -1.65
CAF4YKR036C IST2P38250 946 aa4.76□□□□□ -1.65
CAF4YKR036C YER184CP39961 794 aa4.76□□□□□ -1.65
CAF4YKR036C CCT8P47079 568 aaKnown RBP4.76□□□□□ -1.65
CAF4YKR036C AIM24P47127 394 aa4.76□□□□□ -1.65
CAF4YKR036C DIA3P52290 468 aa4.76□□□□□ -1.65
CAF4YKR036C RTA1P53047 317 aa4.76□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms