RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS22	YKL193C	ELO2	P25358	347 aa		3.18	□□□□□ -1.9
SDS22	YKL193C	CPR3	P25719	182 aa		3.18	□□□□□ -1.9
SDS22	YKL193C	SPC110	P32380	944 aa		3.18	□□□□□ -1.9
SDS22	YKL193C	MTC4	P38335	694 aa	Known RBP	3.18	□□□□□ -1.9
SDS22	YKL193C	PCA1	P38360	1216 aa		3.18	□□□□□ -1.9
SDS22	YKL193C	COS10	P52924	374 aa		3.18	□□□□□ -1.9
SDS22	YKL193C	BNA5	Q05979	453 aa		3.18	□□□□□ -1.9
SDS22	YKL193C	SYO1	Q07395	620 aa		3.18	□□□□□ -1.9
SDS22	YKL193C	AYT1	Q12226	474 aa		3.18	□□□□□ -1.9
SDS22	YKL193C	ENT1	Q12518	454 aa		3.18	□□□□□ -1.9
SDS22	YKL193C	HSH49	Q99181	213 aa	Predicted RBP	3.18	□□□□□ -1.9
SDS22	YKL193C	CYB2	P00175	591 aa		3.17	□□□□□ -1.9
SDS22	YKL193C	CAR1	P00812	333 aa	Known RBP	3.17	□□□□□ -1.9
SDS22	YKL193C	SEC53	P07283	254 aa	Known RBP	3.17	□□□□□ -1.9
SDS22	YKL193C	MCK1	P21965	375 aa	Known RBP	3.17	□□□□□ -1.9
SDS22	YKL193C	YCR022C	P25620	114 aa		3.17	□□□□□ -1.9
SDS22	YKL193C	FRE1	P32791	686 aa		3.17	□□□□□ -1.9
SDS22	YKL193C	SEF1	P34228	1148 aa		3.17	□□□□□ -1.9
SDS22	YKL193C	ALG5	P40350	334 aa		3.17	□□□□□ -1.9
SDS22	YKL193C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
SDS22	YKL193C	AIM22	P47051	409 aa		3.17	□□□□□ -1.9
SDS22	YKL193C	IMD4	P50094	524 aa	Known RBP	3.17	□□□□□ -1.9
SDS22	YKL193C	VID30	P53076	958 aa		3.17	□□□□□ -1.9
SDS22	YKL193C	SLD5	Q03406	294 aa		3.17	□□□□□ -1.9
SDS22	YKL193C	YDL009C	Q12210	107 aa		3.17	□□□□□ -1.9
SDS22	YKL193C	SUC2	P00724	532 aa		3.16	□□□□□ -1.9
SDS22	YKL193C	HEM2	P05373	342 aa		3.16	□□□□□ -1.9
SDS22	YKL193C	RPL20A	P0CX23	172 aa	Known RBP	3.16	□□□□□ -1.9
SDS22	YKL193C	RPL20B	P0CX24	172 aa	Predicted RBP	3.16	□□□□□ -1.9
SDS22	YKL193C	YCR007C	P25354	239 aa		3.16	□□□□□ -1.9
SDS22	YKL193C	TIF4631	P39935	952 aa	Known RBP	3.16	□□□□□ -1.9
SDS22	YKL193C	MRX6	P48564	524 aa		3.16	□□□□□ -1.9
SDS22	YKL193C	SHE10	P53075	577 aa		3.16	□□□□□ -1.9
SDS22	YKL193C	IVY1	Q04934	453 aa		3.16	□□□□□ -1.9
SDS22	YKL193C	THP1	Q08231	455 aa		3.16	□□□□□ -1.9
SDS22	YKL193C	RLM1	Q12224	676 aa		3.16	□□□□□ -1.9
SDS22	YKL193C	YJR112W-A	Q3E743	109 aa		3.16	□□□□□ -1.9
SDS22	YKL193C	OLE1	P21147	510 aa	Known RBP	3.15	□□□□□ -1.91
SDS22	YKL193C	TCD2	P36101	447 aa	Known RBP	3.15	□□□□□ -1.91
SDS22	YKL193C	MRPL4	P36517	319 aa		3.15	□□□□□ -1.91
SDS22	YKL193C	TOF2	Q02208	771 aa		3.15	□□□□□ -1.91
SDS22	YKL193C	MRPL51	Q06090	140 aa	Predicted RBP	3.15	□□□□□ -1.91
SDS22	YKL193C	PHO92	Q06390	306 aa		3.15	□□□□□ -1.91
SDS22	YKL193C	CTI6	Q08923	506 aa		3.15	□□□□□ -1.91
SDS22	YKL193C	RCN2	Q12044	265 aa		3.15	□□□□□ -1.91
SDS22	YKL193C	UTR4	P32626	227 aa		3.14	□□□□□ -1.91
SDS22	YKL193C	MSN2	P33748	704 aa		3.14	□□□□□ -1.91
SDS22	YKL193C	SHP1	P34223	423 aa		3.14	□□□□□ -1.91
SDS22	YKL193C	PMU1	P36069	295 aa		3.14	□□□□□ -1.91
SDS22	YKL193C	NOP4	P37838	685 aa	Known RBP	3.14	□□□□□ -1.91
SDS22	YKL193C	BNA4	P38169	460 aa		3.14	□□□□□ -1.91
SDS22	YKL193C	AVT5	P38176	459 aa		3.14	□□□□□ -1.91
SDS22	YKL193C	TCM62	P38228	572 aa	Known RBP	3.14	□□□□□ -1.91
SDS22	YKL193C	REG2	P38232	338 aa		3.14	□□□□□ -1.91
SDS22	YKL193C	MSR1	P38714	643 aa		3.14	□□□□□ -1.91
SDS22	YKL193C	NPR2	P39923	615 aa		3.14	□□□□□ -1.91
SDS22	YKL193C	ALK1	P43633	760 aa	Known RBP	3.14	□□□□□ -1.91
SDS22	YKL193C	BOR1	P53838	576 aa		3.14	□□□□□ -1.91
SDS22	YKL193C	CBS1	P14066	229 aa		3.13	□□□□□ -1.91
SDS22	YKL193C	DUG2	P38149	878 aa		3.13	□□□□□ -1.91
SDS22	YKL193C	SRO77	P38163	1010 aa		3.13	□□□□□ -1.91
SDS22	YKL193C	SHO1	P40073	367 aa		3.13	□□□□□ -1.91
SDS22	YKL193C	TMA108	P40462	946 aa		3.13	□□□□□ -1.91
SDS22	YKL193C	VPS75	P53853	264 aa		3.13	□□□□□ -1.91
SDS22	YKL193C	HEF3	P53978	1044 aa	Known RBP	3.13	□□□□□ -1.91
SDS22	YKL193C	CFT2	Q12102	859 aa	Predicted RBP	3.13	□□□□□ -1.91
SDS22	YKL193C	YLL056C	Q12177	298 aa		3.13	□□□□□ -1.91
SDS22	YKL193C	LSP1	Q12230	341 aa	Known RBP	3.13	□□□□□ -1.91
SDS22	YKL193C	GAL80	P04387	435 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	ATR1	P13090	542 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	CBS2	P14905	389 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	PRD1	P25375	712 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	WBP1	P33767	430 aa	Known RBP	3.12	□□□□□ -1.91
SDS22	YKL193C	TUL1	P36096	758 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	MUM2	P38236	366 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	TIF5	P38431	405 aa	Known RBP	3.12	□□□□□ -1.91
SDS22	YKL193C	HAT2	P39984	401 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	ALG8	P40351	577 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	YJL132W	P47014	750 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	YGR066C	P53242	292 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	RBG2	P53295	368 aa	Known RBP	3.12	□□□□□ -1.91
SDS22	YKL193C	GPI1	P53306	609 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	IRC15	Q02733	499 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	FIN1	Q03898	291 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	VPS38	Q05919	439 aa		3.12	□□□□□ -1.91
SDS22	YKL193C	COR1	P07256	457 aa		3.11	□□□□□ -1.91
SDS22	YKL193C	MET8	P15807	274 aa		3.11	□□□□□ -1.91
SDS22	YKL193C	PRP2	P20095	876 aa	Predicted RBP	3.11	□□□□□ -1.91
SDS22	YKL193C	GFD2	P25370	566 aa	Known RBP	3.11	□□□□□ -1.91
SDS22	YKL193C	PUT3	P25502	979 aa	Predicted RBP	3.11	□□□□□ -1.91
SDS22	YKL193C	PEP3	P27801	918 aa		3.11	□□□□□ -1.91
SDS22	YKL193C	PAP1	P29468	568 aa	Known RBP	3.11	□□□□□ -1.91
SDS22	YKL193C	YME1	P32795	747 aa		3.11	□□□□□ -1.91
SDS22	YKL193C	ZPR1	P53303	486 aa	Known RBP	3.11	□□□□□ -1.91
SDS22	YKL193C	ARE2	P53629	642 aa	Known RBP	3.11	□□□□□ -1.91
SDS22	YKL193C	WSC2	P53832	503 aa		3.11	□□□□□ -1.91
SDS22	YKL193C	RBS1	Q05672	457 aa	Known RBP	3.11	□□□□□ -1.91
SDS22	YKL193C	VPS74	Q06385	345 aa		3.11	□□□□□ -1.91
SDS22	YKL193C	RKM5	Q12367	367 aa		3.11	□□□□□ -1.91
SDS22	YKL193C	AVL9	Q12500	764 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms