RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W SIP4P46954 829 aa6.62□□□□□ -1.35
NMD5YJR132W YJL181WP46987 611 aa6.62□□□□□ -1.35
NMD5YJR132W PFD1P46988 109 aa6.62□□□□□ -1.35
NMD5YJR132W CUE3P53137 624 aaKnown RBP6.62□□□□□ -1.35
NMD5YJR132W DAM1P53267 343 aa6.62□□□□□ -1.35
NMD5YJR132W TNA1P53322 534 aa6.62□□□□□ -1.35
NMD5YJR132W VHS1Q03785 461 aa6.62□□□□□ -1.35
NMD5YJR132W ROY1Q04847 553 aa6.62□□□□□ -1.35
NMD5YJR132W CUR1Q06469 252 aa6.62□□□□□ -1.35
NMD5YJR132W LUC7Q07508 261 aaPredicted RBP6.62□□□□□ -1.35
NMD5YJR132W SPO75Q07798 868 aa6.62□□□□□ -1.35
NMD5YJR132W CSM4Q08955 156 aa6.62□□□□□ -1.35
NMD5YJR132W IRC20Q06554 1556 aa6.62□□□□□ -1.35
NMD5YJR132W MSF1P08425 469 aa6.61□□□□□ -1.35
NMD5YJR132W ATG22P25568 528 aa6.61□□□□□ -1.35
NMD5YJR132W HEM12P32347 362 aaPredicted RBP6.61□□□□□ -1.35
NMD5YJR132W PET127P32606 800 aa6.61□□□□□ -1.35
NMD5YJR132W SLC1P33333 303 aa6.61□□□□□ -1.35
NMD5YJR132W GDH3P39708 457 aa6.61□□□□□ -1.35
NMD5YJR132W SAH1P39954 449 aaKnown RBP6.61□□□□□ -1.35
NMD5YJR132W YKE4P40544 346 aa6.61□□□□□ -1.35
NMD5YJR132W MET28P40573 187 aa6.61□□□□□ -1.35
NMD5YJR132W HAP5Q02516 242 aa6.61□□□□□ -1.35
NMD5YJR132W HIM1Q06674 414 aa6.61□□□□□ -1.35
NMD5YJR132W YAP7Q08182 245 aa6.61□□□□□ -1.35
NMD5YJR132W TIF6Q12522 245 aaKnown RBP6.61□□□□□ -1.35
NMD5YJR132W AUS1Q08409 1394 aa6.61□□□□□ -1.35
NMD5YJR132W CNA1P23287 553 aa6.61□□□□□ -1.35
NMD5YJR132W YCL049CP25577 312 aa6.61□□□□□ -1.35
NMD5YJR132W COQ8P27697 501 aa6.61□□□□□ -1.35
NMD5YJR132W PRS2P38620 318 aaKnown RBP6.61□□□□□ -1.35
NMD5YJR132W RCK2P38623 610 aa6.61□□□□□ -1.35
NMD5YJR132W RTT101P47050 842 aa6.61□□□□□ -1.35
NMD5YJR132W PAC10P48363 199 aa6.61□□□□□ -1.35
NMD5YJR132W MRX6P48564 524 aa6.61□□□□□ -1.35
NMD5YJR132W SLD3P53135 668 aa6.61□□□□□ -1.35
NMD5YJR132W YLR177WQ06251 628 aa6.61□□□□□ -1.35
NMD5YJR132W FMP25Q08023 583 aa6.61□□□□□ -1.35
NMD5YJR132W PDR10P51533 1564 aa6.61□□□□□ -1.35
NMD5YJR132W ATP6P00854 259 aa6.61□□□□□ -1.35
NMD5YJR132W CHO2P05374 869 aaKnown RBP6.61□□□□□ -1.35
NMD5YJR132W FUM1P08417 488 aaKnown RBP6.61□□□□□ -1.35
NMD5YJR132W CDC24P11433 854 aaPredicted RBP6.61□□□□□ -1.35
NMD5YJR132W LAC1P28496 418 aa6.61□□□□□ -1.35
NMD5YJR132W MF(ALPHA)2P32435 120 aa6.61□□□□□ -1.35
NMD5YJR132W SHM2P37291 469 aaKnown RBP6.61□□□□□ -1.35
NMD5YJR132W GLY1P37303 387 aaKnown RBP6.61□□□□□ -1.35
NMD5YJR132W GIP2P40036 548 aa6.61□□□□□ -1.35
NMD5YJR132W PNC1P53184 216 aaKnown RBP6.61□□□□□ -1.35
NMD5YJR132W YDR476CQ03362 224 aa6.61□□□□□ -1.35
NMD5YJR132W ADE5,7P07244 802 aaKnown RBP6.6□□□□□ -1.35
NMD5YJR132W RNR2P09938 399 aaKnown RBP6.6□□□□□ -1.35
NMD5YJR132W SNF6P18888 332 aa6.6□□□□□ -1.35
NMD5YJR132W AMS1P22855 1083 aa6.6□□□□□ -1.35
NMD5YJR132W CLG1P35190 452 aa6.6□□□□□ -1.35
NMD5YJR132W YKL070WP36087 169 aa6.6□□□□□ -1.35
NMD5YJR132W AVT6P40074 448 aa6.6□□□□□ -1.35
NMD5YJR132W NUP116Q02630 1113 aa6.6□□□□□ -1.35
NMD5YJR132W CRR1Q05790 422 aa6.6□□□□□ -1.35
NMD5YJR132W YLR040CQ07988 224 aa6.6□□□□□ -1.35
NMD5YJR132W SKI7Q08491 747 aaPredicted RBP6.6□□□□□ -1.35
NMD5YJR132W MCM16Q12262 181 aa6.6□□□□□ -1.35
NMD5YJR132W ARE1P25628 610 aa6.6□□□□□ -1.35
NMD5YJR132W NDI1P32340 513 aa6.6□□□□□ -1.35
NMD5YJR132W AAR2P32357 355 aaPredicted RBP6.6□□□□□ -1.35
NMD5YJR132W SOF1P33750 489 aaKnown RBP6.6□□□□□ -1.35
NMD5YJR132W YBP1P38315 674 aa6.6□□□□□ -1.35
NMD5YJR132W SPC97P38863 823 aa6.6□□□□□ -1.35
NMD5YJR132W NVJ1P38881 321 aa6.6□□□□□ -1.35
NMD5YJR132W AST2P39945 430 aaKnown RBP6.6□□□□□ -1.35
NMD5YJR132W CHS6P40955 746 aa6.6□□□□□ -1.35
NMD5YJR132W VMA13P41807 478 aaKnown RBP6.6□□□□□ -1.35
NMD5YJR132W NOP13P53883 403 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
NMD5YJR132W YRR1Q12172 810 aa6.6□□□□□ -1.35
NMD5YJR132W SUL2Q12325 893 aa6.6□□□□□ -1.35
NMD5YJR132W DCN1Q12395 269 aa6.6□□□□□ -1.35
NMD5YJR132W CMR1Q12510 522 aaKnown RBP6.6□□□□□ -1.35
NMD5YJR132W TAF2P23255 1407 aa6.6□□□□□ -1.35
NMD5YJR132W NUP170P38181 1502 aa6.59□□□□□ -1.35
NMD5YJR132W DCD1P06773 312 aa6.59□□□□□ -1.35
NMD5YJR132W STB5P38699 743 aa6.59□□□□□ -1.35
NMD5YJR132W MNN9P39107 395 aaKnown RBP6.59□□□□□ -1.35
NMD5YJR132W NMD5P46970 1048 aa6.59□□□□□ -1.35
NMD5YJR132W DBP6P53734 629 aaKnown RBP6.59□□□□□ -1.35
NMD5YJR132W TMA20P89886 181 aaPredicted RBP6.59□□□□□ -1.35
NMD5YJR132W YDR222WQ04925 415 aa6.59□□□□□ -1.35
NMD5YJR132W PAL1Q05518 499 aaKnown RBP6.59□□□□□ -1.35
NMD5YJR132W MCH5Q08777 521 aa6.59□□□□□ -1.35
NMD5YJR132W MDH1P17505 334 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
NMD5YJR132W RPO26P20435 155 aa6.59□□□□□ -1.35
NMD5YJR132W PPH22P23595 377 aa6.59□□□□□ -1.35
NMD5YJR132W CCR4P31384 837 aaKnown RBP6.59□□□□□ -1.35
NMD5YJR132W MSS1P32559 526 aaPredicted RBP6.59□□□□□ -1.35
NMD5YJR132W CDC13P32797 924 aaKnown RBP6.59□□□□□ -1.35
NMD5YJR132W CSG2P35206 410 aa6.59□□□□□ -1.35
NMD5YJR132W MCX1P38323 520 aaPredicted RBP6.59□□□□□ -1.35
NMD5YJR132W YFL052WP43551 465 aa6.59□□□□□ -1.35
NMD5YJR132W YGR066CP53242 292 aa6.59□□□□□ -1.35
NMD5YJR132W DRN1P53255 507 aaKnown RBP6.59□□□□□ -1.35
NMD5YJR132W ENT5Q03769 411 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms