RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W RTT107P38850 1070 aa5.28□□□□□ -1.56
SPC97YHR172W CAF130P53280 1122 aaPredicted RBP5.28□□□□□ -1.56
SPC97YHR172W INA17Q02888 182 aa5.28□□□□□ -1.56
SPC97YHR172W CAB5Q03941 241 aa5.28□□□□□ -1.56
SPC97YHR172W YMR130WQ04223 302 aa5.28□□□□□ -1.56
SPC97YHR172W YPR078CQ06813 372 aa5.28□□□□□ -1.56
SPC97YHR172W CMS1Q07897 291 aaKnown RBP5.28□□□□□ -1.56
SPC97YHR172W PNO1Q99216 274 aaKnown RBP5.28□□□□□ -1.56
SPC97YHR172W MRP10O75012 95 aa5.27□□□□□ -1.57
SPC97YHR172W PDE2P06776 526 aa5.27□□□□□ -1.57
SPC97YHR172W SAR1P20606 190 aaKnown RBP5.27□□□□□ -1.57
SPC97YHR172W RNR1P21524 888 aaKnown RBP5.27□□□□□ -1.57
SPC97YHR172W PDB1P32473 366 aaKnown RBP5.27□□□□□ -1.57
SPC97YHR172W TOS1P38288 455 aa5.27□□□□□ -1.57
SPC97YHR172W POP7P38291 140 aa5.27□□□□□ -1.57
SPC97YHR172W SEC24P40482 926 aaKnown RBP5.27□□□□□ -1.57
SPC97YHR172W COS5P47187 383 aa5.27□□□□□ -1.57
SPC97YHR172W IMD4P50094 524 aaKnown RBP5.27□□□□□ -1.57
SPC97YHR172W LIF1P53150 421 aa5.27□□□□□ -1.57
SPC97YHR172W SAM50P53969 484 aa5.27□□□□□ -1.57
SPC97YHR172W MTG1Q03151 367 aaPredicted RBP5.27□□□□□ -1.57
SPC97YHR172W RPC11Q04307 110 aaPredicted RBP5.27□□□□□ -1.57
SPC97YHR172W SPC2Q04969 178 aa5.27□□□□□ -1.57
SPC97YHR172W NDL1Q06568 189 aa5.27□□□□□ -1.57
SPC97YHR172W COS7Q07788 383 aa5.27□□□□□ -1.57
SPC97YHR172W MSF1P08425 469 aa5.26□□□□□ -1.57
SPC97YHR172W SEC63P14906 663 aa5.26□□□□□ -1.57
SPC97YHR172W KGD1P20967 1014 aaKnown RBP5.26□□□□□ -1.57
SPC97YHR172W UTR1P21373 530 aa5.26□□□□□ -1.57
SPC97YHR172W DPB2P24482 689 aaPredicted RBP5.26□□□□□ -1.57
SPC97YHR172W SRB5P32585 307 aa5.26□□□□□ -1.57
SPC97YHR172W MRPL16P38064 232 aa5.26□□□□□ -1.57
SPC97YHR172W STB5P38699 743 aa5.26□□□□□ -1.57
SPC97YHR172W YNG2P38806 282 aaKnown RBP5.26□□□□□ -1.57
SPC97YHR172W GTS1P40956 396 aa5.26□□□□□ -1.57
SPC97YHR172W SSY5P47002 699 aa5.26□□□□□ -1.57
SPC97YHR172W MTR3P48240 250 aaPredicted RBP5.26□□□□□ -1.57
SPC97YHR172W BSC6Q08280 497 aa5.26□□□□□ -1.57
SPC97YHR172W DFG16Q99234 619 aa5.26□□□□□ -1.57
SPC97YHR172W PPH22P23595 377 aa5.26□□□□□ -1.57
SPC97YHR172W PRE2P30656 287 aaKnown RBP5.26□□□□□ -1.57
SPC97YHR172W RTC3P38804 111 aaPredicted RBP5.26□□□□□ -1.57
SPC97YHR172W ATM1P40416 690 aa5.26□□□□□ -1.57
SPC97YHR172W YIL108WP40483 696 aaKnown RBP5.26□□□□□ -1.57
SPC97YHR172W ARI1P53111 347 aaKnown RBP5.26□□□□□ -1.57
SPC97YHR172W YLR283WQ05867 314 aa5.26□□□□□ -1.57
SPC97YHR172W SGO1Q08490 590 aa5.26□□□□□ -1.57
SPC97YHR172W BTS1Q12051 335 aa5.26□□□□□ -1.57
SPC97YHR172W GPM1P00950 247 aaKnown RBP5.25□□□□□ -1.57
SPC97YHR172W TCP1P12612 559 aaKnown RBP5.25□□□□□ -1.57
SPC97YHR172W SEC15P22224 910 aa5.25□□□□□ -1.57
SPC97YHR172W UBC6P33296 250 aaPredicted RBP5.25□□□□□ -1.57
SPC97YHR172W VPS51P36116 164 aa5.25□□□□□ -1.57
SPC97YHR172W AIM29P36154 155 aa5.25□□□□□ -1.57
SPC97YHR172W RFC4P40339 323 aaKnown RBP5.25□□□□□ -1.57
SPC97YHR172W VHS2P40463 436 aa5.25□□□□□ -1.57
SPC97YHR172W ZPR1P53303 486 aaKnown RBP5.25□□□□□ -1.57
SPC97YHR172W CUS2P53830 285 aaPredicted RBP5.25□□□□□ -1.57
SPC97YHR172W MFM1Q02783 413 aa5.25□□□□□ -1.57
SPC97YHR172W ENT5Q03769 411 aaKnown RBP5.25□□□□□ -1.57
SPC97YHR172W CTS2Q06350 511 aa5.25□□□□□ -1.57
SPC97YHR172W RTT109Q07794 436 aa5.25□□□□□ -1.57
SPC97YHR172W LEU4P06208 619 aaKnown RBP5.25□□□□□ -1.57
SPC97YHR172W MET3P08536 511 aa5.25□□□□□ -1.57
SPC97YHR172W HEM1P09950 548 aaPredicted RBP5.25□□□□□ -1.57
SPC97YHR172W SEC12P11655 471 aa5.25□□□□□ -1.57
SPC97YHR172W YCP4P25349 247 aaKnown RBP5.25□□□□□ -1.57
SPC97YHR172W YSC84P32793 468 aa5.25□□□□□ -1.57
SPC97YHR172W YJL193WP39542 402 aa5.25□□□□□ -1.57
SPC97YHR172W PCL6P40038 420 aa5.25□□□□□ -1.57
SPC97YHR172W BIT61P47041 543 aa5.25□□□□□ -1.57
SPC97YHR172W YIP5P53108 310 aa5.25□□□□□ -1.57
SPC97YHR172W RSM24Q03976 319 aa5.25□□□□□ -1.57
SPC97YHR172W YML082WQ04533 649 aaKnown RBP5.25□□□□□ -1.57
SPC97YHR172W YDR344CQ05510 147 aa5.25□□□□□ -1.57
SPC97YHR172W VPS74Q06385 345 aa5.25□□□□□ -1.57
SPC97YHR172W VPS36Q06696 566 aa5.25□□□□□ -1.57
SPC97YHR172W AIM41Q12032 185 aa5.25□□□□□ -1.57
SPC97YHR172W ATG31Q12421 196 aa5.25□□□□□ -1.57
SPC97YHR172W PMA1P05030 918 aaKnown RBP5.24□□□□□ -1.57
SPC97YHR172W ERG20P08524 352 aaKnown RBP5.24□□□□□ -1.57
SPC97YHR172W KIN2P13186 1147 aaKnown RBP5.24□□□□□ -1.57
SPC97YHR172W FAR1P21268 830 aa5.24□□□□□ -1.57
SPC97YHR172W VMA16P23968 213 aa5.24□□□□□ -1.57
SPC97YHR172W DAL2P25335 343 aa5.24□□□□□ -1.57
SPC97YHR172W IMP3P32899 183 aaPredicted RBP5.24□□□□□ -1.57
SPC97YHR172W SNZ3P43545 298 aa5.24□□□□□ -1.57
SPC97YHR172W STB2P46679 850 aa5.24□□□□□ -1.57
SPC97YHR172W SNZ2P53824 298 aa5.24□□□□□ -1.57
SPC97YHR172W YNL181WP53878 407 aa5.24□□□□□ -1.57
SPC97YHR172W YMR074CQ04773 145 aa5.24□□□□□ -1.57
SPC97YHR172W MTR10Q99189 972 aa5.24□□□□□ -1.57
SPC97YHR172W TDH2P00358 332 aaKnown RBP5.24□□□□□ -1.57
SPC97YHR172W TDH3P00359 332 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
SPC97YHR172W CAR1P00812 333 aaKnown RBP5.24□□□□□ -1.57
SPC97YHR172W RAD7P06779 565 aa5.24□□□□□ -1.57
SPC97YHR172W CDC21P06785 304 aa5.24□□□□□ -1.57
SPC97YHR172W COQ1P18900 473 aa5.24□□□□□ -1.57
SPC97YHR172W VPS34P22543 875 aa5.24□□□□□ -1.57
SPC97YHR172W LRE1P25579 583 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms