RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC4	YFL009W	PHO81	P17442	1178 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	ATP7	P30902	174 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	NGG1	P32494	702 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	CYM1	P32898	989 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	QNS1	P38795	714 aa	Known RBP	4.92	□□□□□ -1.62
CDC4	YFL009W	YHR131C	P38835	850 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	PLB1	P39105	664 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	YEN1	P40028	759 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	MXR1	P40029	184 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	MNT3	P40549	630 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	CWC23	P52868	283 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC4	YFL009W	GET1	P53192	235 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	COG5	P53951	403 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	EGD1	Q02642	157 aa	Known RBP	4.92	□□□□□ -1.62
CDC4	YFL009W	RSB1	Q08417	382 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	NYV1	Q12255	253 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	MDM12	Q92328	271 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	STE2	D6VTK4	431 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	COX4	P04037	155 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	SNF3	P10870	884 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	GAL3	P13045	520 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	PMA2	P19657	947 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	SRO9	P25567	434 aa	Known RBP	4.92	□□□□□ -1.62
CDC4	YFL009W	PEX6	P33760	1030 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	PHO89	P38361	574 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	RIM4	P38741	713 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	YHR078W	P38799	552 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	CRP1	P38845	465 aa	Known RBP	4.92	□□□□□ -1.62
CDC4	YFL009W	FHL1	P39521	936 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	SOK1	P40317	901 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	YJL045W	P47052	634 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	RPT4	P53549	437 aa	Known RBP	4.92	□□□□□ -1.62
CDC4	YFL009W	RPA49	Q01080	415 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC4	YFL009W	UGO1	Q03327	502 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	RSN1	Q03516	953 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	YMR209C	Q03648	457 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	BNA7	Q04066	261 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	ARP10	Q04549	284 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	IVY1	Q04934	453 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	LAG2	Q92325	660 aa		4.92	□□□□□ -1.62
CDC4	YFL009W	GAL10	P04397	699 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	MET17	P06106	444 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	PCK1	P10963	549 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	CBS2	P14905	389 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	SAR1	P20606	190 aa	Known RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	CNB1	P25296	175 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	PET309	P32522	965 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	ALG14	P38242	237 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	ECM10	P39987	644 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	GTT1	P40582	234 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	YFR018C	P43599	363 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	BFA1	P47113	574 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	LYS4	P49367	693 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	SLI1	P53304	468 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	SDH1	Q00711	640 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	IWR1	Q07532	353 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	APC9	Q12107	265 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	NCP1	P16603	691 aa	Known RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	EST1	P17214	699 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	CHS3	P29465	1165 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	PXA2	P34230	853 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	CBT1	P36038	271 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	OTU2	P38747	307 aa	Known RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	SBE22	P38814	852 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	EGD2	P38879	174 aa	Known RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	PHM8	P40025	321 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	YFL040W	P43562	540 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	MNN5	P46982	586 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	OCA1	P50946	238 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	UBC12	P52491	188 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	COG1	P53079	417 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	GPG1	P53130	126 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	SLD3	P53135	668 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	MNP1	P53163	194 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	PEX8	P53248	589 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	GTF1	P53260	183 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	YPL068C	Q02749	293 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	YPS7	Q06325	596 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	YLR352W	Q06479	807 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	SKI7	Q08491	747 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	PGC1	Q08959	321 aa		4.91	□□□□□ -1.62
CDC4	YFL009W	KEL3	Q08979	651 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC4	YFL009W	CAR1	P00812	333 aa	Known RBP	4.9	□□□□□ -1.62
CDC4	YFL009W	ADE5,7	P07244	802 aa	Known RBP	4.9	□□□□□ -1.62
CDC4	YFL009W	CAP2	P13517	287 aa		4.9	□□□□□ -1.62
CDC4	YFL009W	GIT1	P25346	518 aa		4.9	□□□□□ -1.62
CDC4	YFL009W	SPT14	P32363	452 aa		4.9	□□□□□ -1.62
CDC4	YFL009W	PMT1	P33775	817 aa		4.9	□□□□□ -1.62
CDC4	YFL009W	SUL1	P38359	859 aa		4.9	□□□□□ -1.62
CDC4	YFL009W	YHR202W	P38887	602 aa		4.9	□□□□□ -1.62
CDC4	YFL009W	YER034W	P40022	185 aa	Known RBP	4.9	□□□□□ -1.62
CDC4	YFL009W	THO1	P40040	218 aa	Known RBP	4.9	□□□□□ -1.62
CDC4	YFL009W	RTT101	P47050	842 aa		4.9	□□□□□ -1.62
CDC4	YFL009W	ARE2	P53629	642 aa	Known RBP	4.9	□□□□□ -1.62
CDC4	YFL009W	ARK1	P53974	638 aa		4.9	□□□□□ -1.62
CDC4	YFL009W	SSY1	Q03770	852 aa		4.9	□□□□□ -1.62
CDC4	YFL009W	MUS81	Q04149	632 aa	Predicted RBP	4.9	□□□□□ -1.62
CDC4	YFL009W	BUR2	Q05949	395 aa		4.9	□□□□□ -1.62
CDC4	YFL009W	SUE1	Q06524	206 aa		4.9	□□□□□ -1.62
CDC4	YFL009W	YDL124W	Q07551	312 aa	Known RBP	4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms