RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W PRD1P25375 712 aa1.22□□□□□ -2.21
SMC1YFL008W PAH1P32567 862 aa1.22□□□□□ -2.21
SMC1YFL008W AVT5P38176 459 aa1.22□□□□□ -2.21
SMC1YFL008W CCT2P39076 527 aaKnown RBP1.22□□□□□ -2.21
SMC1YFL008W VID27P40157 782 aa1.22□□□□□ -2.21
SMC1YFL008W PFK26P40433 827 aaKnown RBP1.22□□□□□ -2.21
SMC1YFL008W ATG27P46989 271 aa1.22□□□□□ -2.21
SMC1YFL008W SOL4P53315 255 aa1.22□□□□□ -2.21
SMC1YFL008W RLI1Q03195 608 aaKnown RBP1.22□□□□□ -2.21
SMC1YFL008W YMR160WQ03823 816 aa1.22□□□□□ -2.21
SMC1YFL008W RAD30Q04049 632 aa1.22□□□□□ -2.21
SMC1YFL008W RBS1Q05672 457 aaKnown RBP1.22□□□□□ -2.21
SMC1YFL008W MDM30Q05930 598 aa1.22□□□□□ -2.21
SMC1YFL008W PSR2Q07949 397 aa1.22□□□□□ -2.21
SMC1YFL008W YPT6Q99260 215 aa1.22□□□□□ -2.21
SMC1YFL008W SEM1O94742 89 aa1.22□□□□□ -2.21
SMC1YFL008W AAC3P18238 307 aa1.22□□□□□ -2.21
SMC1YFL008W CHS3P29465 1165 aa1.22□□□□□ -2.21
SMC1YFL008W ACH1P32316 526 aa1.22□□□□□ -2.21
SMC1YFL008W PHD1P36093 366 aa1.22□□□□□ -2.21
SMC1YFL008W SLX1P38324 304 aa1.22□□□□□ -2.21
SMC1YFL008W CCT4P39078 528 aaKnown RBP1.22□□□□□ -2.21
SMC1YFL008W FUN12P39730 1002 aaKnown RBP1.22□□□□□ -2.21
SMC1YFL008W IST3P40565 148 aaPredicted RBP1.22□□□□□ -2.21
SMC1YFL008W IMP4P53941 290 aaKnown RBP1.22□□□□□ -2.21
SMC1YFL008W ARP10Q04549 284 aa1.22□□□□□ -2.21
SMC1YFL008W SKG3Q06315 1026 aa1.22□□□□□ -2.21
SMC1YFL008W DAP1Q12091 152 aa1.22□□□□□ -2.21
SMC1YFL008W SNF3P10870 884 aa1.22□□□□□ -2.21
SMC1YFL008W SAN1P22470 610 aa1.22□□□□□ -2.21
SMC1YFL008W BUD14P27637 709 aa1.22□□□□□ -2.21
SMC1YFL008W YBL055CP34220 418 aaPredicted RBP1.22□□□□□ -2.21
SMC1YFL008W TCM62P38228 572 aaKnown RBP1.22□□□□□ -2.21
SMC1YFL008W TIF4631P39935 952 aaKnown RBP1.22□□□□□ -2.21
SMC1YFL008W PSF2P40359 213 aa1.22□□□□□ -2.21
SMC1YFL008W SYG1P40528 902 aa1.22□□□□□ -2.21
SMC1YFL008W SLD5Q03406 294 aa1.22□□□□□ -2.21
SMC1YFL008W YLR352WQ06479 807 aa1.22□□□□□ -2.21
SMC1YFL008W TMS1Q12116 473 aa1.22□□□□□ -2.21
SMC1YFL008W BI2P03873 423 aa1.21□□□□□ -2.22
SMC1YFL008W NUC1P08466 329 aa1.21□□□□□ -2.22
SMC1YFL008W RAP1P11938 827 aa1.21□□□□□ -2.22
SMC1YFL008W RAD16P31244 790 aa1.21□□□□□ -2.22
SMC1YFL008W ATP11P32453 318 aa1.21□□□□□ -2.22
SMC1YFL008W SPR1P32603 445 aa1.21□□□□□ -2.22
SMC1YFL008W RAD24P32641 659 aa1.21□□□□□ -2.22
SMC1YFL008W AUR1P36107 401 aaPredicted RBP1.21□□□□□ -2.22
SMC1YFL008W YHR218WP38899 603 aa1.21□□□□□ -2.22
SMC1YFL008W PGU1P47180 361 aa1.21□□□□□ -2.22
SMC1YFL008W YPL014WQ02606 381 aa1.21□□□□□ -2.22
SMC1YFL008W CTL1Q03220 320 aaKnown RBP1.21□□□□□ -2.22
SMC1YFL008W ERV2Q12284 196 aa1.21□□□□□ -2.22
SMC1YFL008W QCR6P00127 147 aa1.21□□□□□ -2.22
SMC1YFL008W MRP2P10663 115 aaPredicted RBP1.21□□□□□ -2.22
SMC1YFL008W SSE2P32590 693 aaKnown RBP1.21□□□□□ -2.22
SMC1YFL008W YBR225WP38321 900 aa1.21□□□□□ -2.22
SMC1YFL008W ERG7P38604 731 aa1.21□□□□□ -2.22
SMC1YFL008W OSH3P38713 996 aaKnown RBP1.21□□□□□ -2.22
SMC1YFL008W VPS52P39904 641 aa1.21□□□□□ -2.22
SMC1YFL008W TAF11Q04226 346 aa1.21□□□□□ -2.22
SMC1YFL008W ETT1Q08421 412 aaKnown RBP1.21□□□□□ -2.22
SMC1YFL008W YEF3P16521 1044 aaKnown RBP1.21□□□□□ -2.22
SMC1YFL008W ISY1P21374 235 aaPredicted RBP1.21□□□□□ -2.22
SMC1YFL008W MSN2P33748 704 aa1.21□□□□□ -2.22
SMC1YFL008W ECM15P35195 104 aa1.21□□□□□ -2.22
SMC1YFL008W LSM5P40089 93 aaKnown RBP1.21□□□□□ -2.22
SMC1YFL008W GIS2P53849 153 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
SMC1YFL008W VPS75P53853 264 aa1.21□□□□□ -2.22
SMC1YFL008W SAM50P53969 484 aa1.21□□□□□ -2.22
SMC1YFL008W TIM10P87108 93 aa1.21□□□□□ -2.22
SMC1YFL008W LUC7Q07508 261 aaPredicted RBP1.21□□□□□ -2.22
SMC1YFL008W YEH1Q07804 573 aa1.21□□□□□ -2.22
SMC1YFL008W YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
SMC1YFL008W FDH1Q08911 376 aa1.21□□□□□ -2.22
SMC1YFL008W STT4P37297 1900 aa1.2□□□□□ -2.22
SMC1YFL008W PMR1P13586 950 aa1.2□□□□□ -2.22
SMC1YFL008W UTR4P32626 227 aa1.2□□□□□ -2.22
SMC1YFL008W RFC1P38630 861 aaKnown RBP1.2□□□□□ -2.22
SMC1YFL008W IDP2P41939 412 aa1.2□□□□□ -2.22
SMC1YFL008W DUO1P53168 247 aaKnown RBP1.2□□□□□ -2.22
SMC1YFL008W ECI1Q05871 280 aa1.2□□□□□ -2.22
SMC1YFL008W SNT309Q06091 175 aaPredicted RBP1.2□□□□□ -2.22
SMC1YFL008W YDL218WQ07629 317 aa1.2□□□□□ -2.22
SMC1YFL008W YOL159C-AQ3E769 90 aa1.2□□□□□ -2.22
SMC1YFL008W TYR1P20049 452 aa1.2□□□□□ -2.22
SMC1YFL008W PRP2P20095 876 aaPredicted RBP1.2□□□□□ -2.22
SMC1YFL008W MRE11P32829 692 aa1.2□□□□□ -2.22
SMC1YFL008W RIM2P38127 377 aa1.2□□□□□ -2.22
SMC1YFL008W DUG2P38149 878 aa1.2□□□□□ -2.22
SMC1YFL008W CST26P38226 397 aa1.2□□□□□ -2.22
SMC1YFL008W RTT107P38850 1070 aa1.2□□□□□ -2.22
SMC1YFL008W FLC2P39719 783 aa1.2□□□□□ -2.22
SMC1YFL008W YJR061WP40355 935 aa1.2□□□□□ -2.22
SMC1YFL008W SKP2P42843 763 aa1.2□□□□□ -2.22
SMC1YFL008W IRC6P43615 237 aa1.2□□□□□ -2.22
SMC1YFL008W ECM27P47144 725 aa1.2□□□□□ -2.22
SMC1YFL008W DSD1P53095 428 aa1.2□□□□□ -2.22
SMC1YFL008W ERG26P53199 349 aaKnown RBP1.2□□□□□ -2.22
SMC1YFL008W BOP3P53958 396 aa1.2□□□□□ -2.22
SMC1YFL008W SYF1Q04048 859 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms