RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W UBC1P21734 215 aaKnown RBP3.23□□□□□ -1.89
PRE1YER012W MCK1P21965 375 aaKnown RBP3.23□□□□□ -1.89
PRE1YER012W APE3P37302 537 aaKnown RBP3.23□□□□□ -1.89
PRE1YER012W RRP3P38712 501 aaKnown RBP3.23□□□□□ -1.89
PRE1YER012W ECM29P38737 1868 aa3.23□□□□□ -1.89
PRE1YER012W UBA4P38820 440 aa3.23□□□□□ -1.89
PRE1YER012W RPH1P39956 796 aa3.23□□□□□ -1.89
PRE1YER012W RPR2P40571 144 aa3.23□□□□□ -1.89
PRE1YER012W RPS10BP46784 105 aaKnown RBP3.23□□□□□ -1.89
PRE1YER012W INM2Q05533 292 aa3.23□□□□□ -1.89
PRE1YER012W APL4Q12028 832 aa3.23□□□□□ -1.89
PRE1YER012W SET6Q12529 373 aa3.23□□□□□ -1.89
PRE1YER012W PTK1P36002 662 aaPredicted RBP3.22□□□□□ -1.89
PRE1YER012W AGP2P38090 596 aa3.22□□□□□ -1.89
PRE1YER012W IME4P41833 600 aa3.22□□□□□ -1.89
PRE1YER012W YFH7P43591 353 aa3.22□□□□□ -1.89
PRE1YER012W TFC6Q06339 672 aa3.22□□□□□ -1.89
PRE1YER012W CSR1Q06705 408 aaKnown RBP3.22□□□□□ -1.89
PRE1YER012W YEH2Q07950 538 aa3.22□□□□□ -1.89
PRE1YER012W RPS10AQ08745 105 aaPredicted RBP3.22□□□□□ -1.89
PRE1YER012W INP53Q12271 1107 aa3.22□□□□□ -1.89
PRE1YER012W MTF2P10849 440 aa3.21□□□□□ -1.9
PRE1YER012W TYR1P20049 452 aa3.21□□□□□ -1.9
PRE1YER012W SEC62P21825 274 aa3.21□□□□□ -1.9
PRE1YER012W CDC15P27636 974 aa3.21□□□□□ -1.9
PRE1YER012W NDC1P32500 655 aa3.21□□□□□ -1.9
PRE1YER012W ROT2P38138 954 aa3.21□□□□□ -1.9
PRE1YER012W FUI1P38196 639 aa3.21□□□□□ -1.9
PRE1YER012W YEL068CP39977 110 aa3.21□□□□□ -1.9
PRE1YER012W RTT101P47050 842 aa3.21□□□□□ -1.9
PRE1YER012W ADD37Q03233 198 aa3.21□□□□□ -1.9
PRE1YER012W HCR1Q05775 265 aaKnown RBP3.21□□□□□ -1.9
PRE1YER012W TAO3P40468 2376 aa3.2□□□□□ -1.9
PRE1YER012W DAL5P15365 543 aa3.2□□□□□ -1.9
PRE1YER012W SWH1P35845 1188 aa3.2□□□□□ -1.9
PRE1YER012W BUR6P40096 142 aa3.2□□□□□ -1.9
PRE1YER012W PIB2P53191 635 aa3.2□□□□□ -1.9
PRE1YER012W UBX2Q04228 584 aa3.2□□□□□ -1.9
PRE1YER012W SSK1Q07084 712 aa3.2□□□□□ -1.9
PRE1YER012W SNU66Q12420 587 aaPredicted RBP3.2□□□□□ -1.9
PRE1YER012W YLR302CO13544 120 aa3.19□□□□□ -1.9
PRE1YER012W SUP35P05453 685 aaKnown RBP3.19□□□□□ -1.9
PRE1YER012W RPS19AP07280 144 aaKnown RBP3.19□□□□□ -1.9
PRE1YER012W RPS19BP07281 144 aaPredicted RBP3.19□□□□□ -1.9
PRE1YER012W PTR2P32901 601 aa3.19□□□□□ -1.9
PRE1YER012W SNU114P36048 1008 aaKnown RBP3.19□□□□□ -1.9
PRE1YER012W MRPL4P36517 319 aa3.19□□□□□ -1.9
PRE1YER012W MTC4P38335 694 aaKnown RBP3.19□□□□□ -1.9
PRE1YER012W AFG3P39925 761 aa3.19□□□□□ -1.9
PRE1YER012W SMK1P41808 388 aa3.19□□□□□ -1.9
PRE1YER012W SMC3P47037 1230 aa3.19□□□□□ -1.9
PRE1YER012W RPS7BP48164 190 aaKnown RBP3.19□□□□□ -1.9
PRE1YER012W COS10P52924 374 aa3.19□□□□□ -1.9
PRE1YER012W UBX4P54730 416 aa3.19□□□□□ -1.9
PRE1YER012W YPL014WQ02606 381 aa3.19□□□□□ -1.9
PRE1YER012W RPM2Q02773 1202 aa3.19□□□□□ -1.9
PRE1YER012W EMI2Q04409 500 aaKnown RBP3.19□□□□□ -1.9
PRE1YER012W BLS1Q06071 122 aa3.19□□□□□ -1.9
PRE1YER012W AYT1Q12226 474 aa3.19□□□□□ -1.9
PRE1YER012W ARP6Q12509 438 aa3.19□□□□□ -1.9
PRE1YER012W YDR034W-BQ6Q5X2 51 aa3.19□□□□□ -1.9
PRE1YER012W YBR085C-AO43137 85 aa3.18□□□□□ -1.9
PRE1YER012W SGV1P23293 657 aaKnown RBP3.18□□□□□ -1.9
PRE1YER012W SIP2P34164 415 aaKnown RBP3.18□□□□□ -1.9
PRE1YER012W TIF3P34167 436 aaKnown RBP3.18□□□□□ -1.9
PRE1YER012W YKL050CP35736 922 aa3.18□□□□□ -1.9
PRE1YER012W VPS24P36095 224 aaKnown RBP3.18□□□□□ -1.9
PRE1YER012W YBL028CP38202 106 aa3.18□□□□□ -1.9
PRE1YER012W VPS52P39904 641 aa3.18□□□□□ -1.9
PRE1YER012W YPI1P43587 155 aa3.18□□□□□ -1.9
PRE1YER012W SAM50P53969 484 aa3.18□□□□□ -1.9
PRE1YER012W CDC45Q08032 650 aa3.18□□□□□ -1.9
PRE1YER012W TRM8Q12009 286 aa3.18□□□□□ -1.9
PRE1YER012W HEM2P05373 342 aa3.17□□□□□ -1.9
PRE1YER012W HIP1P06775 603 aa3.17□□□□□ -1.9
PRE1YER012W MTF1P14908 341 aaKnown RBP3.17□□□□□ -1.9
PRE1YER012W TRX2P22803 104 aaKnown RBP3.17□□□□□ -1.9
PRE1YER012W ECM15P35195 104 aa3.17□□□□□ -1.9
PRE1YER012W TEF4P36008 412 aaKnown RBP3.17□□□□□ -1.9
PRE1YER012W FAA2P39518 744 aa3.17□□□□□ -1.9
PRE1YER012W IES5P40060 125 aa3.17□□□□□ -1.9
PRE1YER012W YMR147WP40218 223 aaKnown RBP3.17□□□□□ -1.9
PRE1YER012W BNA1P47096 177 aa3.17□□□□□ -1.9
PRE1YER012W SHE10P53075 577 aa3.17□□□□□ -1.9
PRE1YER012W YVH1Q02256 364 aaKnown RBP3.17□□□□□ -1.9
PRE1YER012W ATG16Q03818 150 aa3.17□□□□□ -1.9
PRE1YER012W ECM30Q06673 1274 aa3.17□□□□□ -1.9
PRE1YER012W GRC3Q07845 632 aa3.17□□□□□ -1.9
PRE1YER012W THI20Q08224 551 aa3.17□□□□□ -1.9
PRE1YER012W UBR2Q07963 1872 aa3.17□□□□□ -1.9
PRE1YER012W LDB16P25587 256 aa3.16□□□□□ -1.9
PRE1YER012W PWP2P25635 923 aaKnown RBP3.16□□□□□ -1.9
PRE1YER012W SNC1P31109 117 aa3.16□□□□□ -1.9
PRE1YER012W YNG2P38806 282 aaKnown RBP3.16□□□□□ -1.9
PRE1YER012W TIF4631P39935 952 aaKnown RBP3.16□□□□□ -1.9
PRE1YER012W PYK2P52489 506 aaKnown RBP3.16□□□□□ -1.9
PRE1YER012W RSM23Q01163 450 aa3.16□□□□□ -1.9
PRE1YER012W RLI1Q03195 608 aaKnown RBP3.16□□□□□ -1.9
PRE1YER012W SAM2P19358 384 aaKnown RBP3.15□□□□□ -1.91
PRE1YER012W YCR022CP25620 114 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms