RNA–Protein interactions for RNA: YER011W

TIR1, Transcript of Cell wall mannoprotein, yeast

Gene TIR1, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR1	YER011W	ERV46	P39727	415 aa		13.15	□□□□□ -0.3
TIR1	YER011W	YEN1	P40028	759 aa		13.15	□□□□□ -0.3
TIR1	YER011W	RHO3	Q00245	231 aa	Known RBP	13.15	□□□□□ -0.3
TIR1	YER011W	GLO2	Q05584	274 aa		13.15	□□□□□ -0.3
TIR1	YER011W	OPT2	Q06593	877 aa		13.15	□□□□□ -0.3
TIR1	YER011W	PRP4	P20053	465 aa	Known RBP	13.14	□□□□□ -0.31
TIR1	YER011W	MEI5	P32489	222 aa		13.14	□□□□□ -0.31
TIR1	YER011W	TOA1	P32773	286 aa		13.14	□□□□□ -0.31
TIR1	YER011W	YMR111C	Q04461	462 aa	Predicted RBP	13.14	□□□□□ -0.31
TIR1	YER011W	YEH2	Q07950	538 aa		13.14	□□□□□ -0.31
TIR1	YER011W	RKM5	Q12367	367 aa		13.14	□□□□□ -0.31
TIR1	YER011W	RRP36	Q12481	300 aa	Predicted RBP	13.14	□□□□□ -0.31
TIR1	YER011W	MHT1	Q12525	324 aa		13.14	□□□□□ -0.31
TIR1	YER011W	SPT16	P32558	1035 aa	Known RBP	13.13	□□□□□ -0.31
TIR1	YER011W	DOM34	P33309	386 aa		13.13	□□□□□ -0.31
TIR1	YER011W	SIP2	P34164	415 aa	Known RBP	13.13	□□□□□ -0.31
TIR1	YER011W	PTC1	P35182	281 aa		13.13	□□□□□ -0.31
TIR1	YER011W	YHR033W	P38690	423 aa		13.13	□□□□□ -0.31
TIR1	YER011W	ARN1	P38731	627 aa		13.13	□□□□□ -0.31
TIR1	YER011W	GGC1	P38988	300 aa		13.13	□□□□□ -0.31
TIR1	YER011W	FRT2	P39734	528 aa		13.13	□□□□□ -0.31
TIR1	YER011W	FET5	P43561	622 aa		13.13	□□□□□ -0.31
TIR1	YER011W	EAF1	Q06337	982 aa		13.13	□□□□□ -0.31
TIR1	YER011W	HXK2	P04807	486 aa	Known RBP	13.12	□□□□□ -0.31
TIR1	YER011W	RPL1A	P0CX43	217 aa	Known RBP	13.12	□□□□□ -0.31
TIR1	YER011W	RPL1B	P0CX44	217 aa	Known RBP	13.12	□□□□□ -0.31
TIR1	YER011W	LAT1	P12695	482 aa	Known RBP	13.12	□□□□□ -0.31
TIR1	YER011W	PRP6	P19735	899 aa	Predicted RBP	13.12	□□□□□ -0.31
TIR1	YER011W	AXL2	P38928	823 aa		13.12	□□□□□ -0.31
TIR1	YER011W	NAS6	P50086	228 aa		13.12	□□□□□ -0.31
TIR1	YER011W	KXD1	P53158	218 aa		13.12	□□□□□ -0.31
TIR1	YER011W	YGR053C	P53234	283 aa		13.12	□□□□□ -0.31
TIR1	YER011W	SDH1	Q00711	640 aa		13.12	□□□□□ -0.31
TIR1	YER011W	UBP2	Q01476	1272 aa		13.12	□□□□□ -0.31
TIR1	YER011W	BNA5	Q05979	453 aa		13.12	□□□□□ -0.31
TIR1	YER011W	FAR10	Q06001	478 aa		13.12	□□□□□ -0.31
TIR1	YER011W	YCL012C	Q8J0M4	134 aa		13.12	□□□□□ -0.31
TIR1	YER011W	RPS4A	P0CX35	261 aa	Known RBP	13.11	□□□□□ -0.31
TIR1	YER011W	RPS4B	P0CX36	261 aa	Known RBP	13.11	□□□□□ -0.31
TIR1	YER011W	CMP2	P14747	604 aa		13.11	□□□□□ -0.31
TIR1	YER011W	SGV1	P23293	657 aa	Known RBP	13.11	□□□□□ -0.31
TIR1	YER011W	OCA4	P25366	362 aa		13.11	□□□□□ -0.31
TIR1	YER011W	RNQ1	P25367	405 aa		13.11	□□□□□ -0.31
TIR1	YER011W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	13.11	□□□□□ -0.31	not detected
TIR1	YER011W	RAD14	P28519	371 aa		13.11	□□□□□ -0.31
TIR1	YER011W	MVD1	P32377	396 aa	Known RBP	13.11	□□□□□ -0.31
TIR1	YER011W	CDC13	P32797	924 aa	Known RBP	13.11	□□□□□ -0.31
TIR1	YER011W	YBL029W	P38201	376 aa		13.11	□□□□□ -0.31
TIR1	YER011W	LYS1	P38998	373 aa	RIP-Chip data	13.11	□□□□□ -0.31	RIP-Chip
TIR1	YER011W	MET12	P46151	657 aa		13.11	□□□□□ -0.31
TIR1	YER011W	ERG26	P53199	349 aa	Known RBP	13.11	□□□□□ -0.31
TIR1	YER011W	CMR1	Q12510	522 aa	Known RBP	13.11	□□□□□ -0.31
TIR1	YER011W	STT4	P37297	1900 aa		13.1	□□□□□ -0.31
TIR1	YER011W	KIN2	P13186	1147 aa	Known RBP	13.1	□□□□□ -0.31
TIR1	YER011W	SFC1	P33303	322 aa		13.1	□□□□□ -0.31
TIR1	YER011W	EMC3	P36039	253 aa		13.1	□□□□□ -0.31
TIR1	YER011W	LRO1	P40345	661 aa		13.1	□□□□□ -0.31
TIR1	YER011W	CAB2	P40506	365 aa		13.1	□□□□□ -0.31
TIR1	YER011W	ARE2	P53629	642 aa	Known RBP	13.1	□□□□□ -0.31
TIR1	YER011W	YNR021W	P53723	404 aa	Known RBP	13.1	□□□□□ -0.31
TIR1	YER011W	MPS1	P54199	764 aa		13.1	□□□□□ -0.31
TIR1	YER011W	GIP3	Q03016	1276 aa		13.1	□□□□□ -0.31
TIR1	YER011W	UAF30	Q08747	228 aa		13.1	□□□□□ -0.31
TIR1	YER011W	HAL9	Q12180	1030 aa		13.1	□□□□□ -0.31
TIR1	YER011W	YOR114W	Q12219	294 aa		13.1	□□□□□ -0.31
TIR1	YER011W	YLR111W	Q12528	110 aa		13.1	□□□□□ -0.31
TIR1	YER011W	FUR1	P18562	216 aa	Known RBP	13.09	□□□□□ -0.31
TIR1	YER011W	CAF4	P36130	643 aa		13.09	□□□□□ -0.31
TIR1	YER011W	YBR071W	P38243	211 aa		13.09	□□□□□ -0.31
TIR1	YER011W	RGA1	P39083	1007 aa		13.09	□□□□□ -0.31
TIR1	YER011W	PLB1	P39105	664 aa		13.09	□□□□□ -0.31
TIR1	YER011W	AZF1	P41696	914 aa		13.09	□□□□□ -0.31
TIR1	YER011W	CCT7	P42943	550 aa	Known RBP	13.09	□□□□□ -0.31
TIR1	YER011W	YJL049W	P47048	450 aa		13.09	□□□□□ -0.31
TIR1	YER011W	YET2	Q04210	160 aa		13.09	□□□□□ -0.31
TIR1	YER011W	YDR262W	Q12331	272 aa		13.09	□□□□□ -0.31
TIR1	YER011W	SAS5	Q99314	248 aa		13.09	□□□□□ -0.31
TIR1	YER011W	DST1	P07273	309 aa		13.08	□□□□□ -0.32
TIR1	YER011W	RPS21A	P0C0V8	87 aa	Known RBP	13.08	□□□□□ -0.32
TIR1	YER011W	GFD2	P25370	566 aa	Known RBP	13.08	□□□□□ -0.32
TIR1	YER011W	MLS1	P30952	554 aa		13.08	□□□□□ -0.32
TIR1	YER011W	KKQ8	P36004	724 aa		13.08	□□□□□ -0.32
TIR1	YER011W	MEP2	P41948	499 aa		13.08	□□□□□ -0.32
TIR1	YER011W	MTQ2	Q03920	221 aa	Predicted RBP	13.08	□□□□□ -0.32
TIR1	YER011W	YDR124W	Q04608	324 aa		13.08	□□□□□ -0.32
TIR1	YER011W	SLF1	Q12034	447 aa	Known RBP	13.08	□□□□□ -0.32
TIR1	YER011W	PIN2	Q12057	282 aa		13.08	□□□□□ -0.32
TIR1	YER011W	HUA2	Q12134	243 aa		13.08	□□□□□ -0.32
TIR1	YER011W	TRX3	P25372	127 aa		13.07	□□□□□ -0.32
TIR1	YER011W	FUN30	P31380	1131 aa		13.07	□□□□□ -0.32
TIR1	YER011W	SKN1	P33336	771 aa		13.07	□□□□□ -0.32
TIR1	YER011W	FRE2	P36033	711 aa		13.07	□□□□□ -0.32
TIR1	YER011W	YCR087C-A	P37263	153 aa		13.07	□□□□□ -0.32
TIR1	YER011W	RRN10	P38204	145 aa		13.07	□□□□□ -0.32
TIR1	YER011W	USE1	P53146	245 aa		13.07	□□□□□ -0.32
TIR1	YER011W	PRP38	Q00723	242 aa	Predicted RBP	13.07	□□□□□ -0.32
TIR1	YER011W	MET31	Q03081	177 aa		13.07	□□□□□ -0.32
TIR1	YER011W	BSC2	Q05611	235 aa		13.07	□□□□□ -0.32
TIR1	YER011W	CDA1	Q06702	301 aa		13.07	□□□□□ -0.32
TIR1	YER011W	SGT1	Q08446	395 aa		13.07	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 113.3 ms