RNA–Protein interactions for RNA: YDR337W

MRPS28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene MRPS28, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	YDR337W	INM1	P38710	295 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	GIC1	P38785	314 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	GIM4	P40005	111 aa	Known RBP	6.57	□□□□□ -1.36
MRPS28	YDR337W	PFA3	P42836	336 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	YJR030C	P47101	745 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	YJR149W	P47177	404 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	GTO1	P48239	356 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	MDM34	P53083	459 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	COS6	P53344	381 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	AAT1	Q01802	451 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	MET31	Q03081	177 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	HFD1	Q04458	532 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	YDR124W	Q04608	324 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	BSC2	Q05611	235 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	ASA1	Q06822	443 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	YPR011C	Q12251	326 aa		6.57	□□□□□ -1.36
MRPS28	YDR337W	ATP6	P00854	259 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	HTA2	P04912	132 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	PHO81	P17442	1178 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	YSR3	P23501	404 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	PHO87	P25360	923 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	OCA4	P25366	362 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	PHO91	P27514	894 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	NGG1	P32494	702 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	RML2	P32611	393 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	PDX3	P38075	228 aa	Known RBP	6.56	□□□□□ -1.36
MRPS28	YDR337W	YHR127W	P38833	243 aa	Known RBP	6.56	□□□□□ -1.36
MRPS28	YDR337W	MEP2	P41948	499 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	MDJ2	P42834	146 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	TY4A-J	P47023	414 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	NAS6	P50086	228 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	ZRG17	P53735	605 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	HOT1	Q03213	719 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	VHS1	Q03785	461 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	MCH5	Q08777	521 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	VPS68	Q12016	184 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	NSL1	Q12143	216 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	YPL245W	Q12179	454 aa	Known RBP	6.56	□□□□□ -1.36
MRPS28	YDR337W	RUP1	Q12242	671 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	NAG1	Q8TGN9	163 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	NHA1	Q99271	985 aa		6.56	□□□□□ -1.36
MRPS28	YDR337W	INH1	P01097	85 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	TPK2	P06245	380 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	POL30	P15873	258 aa	Known RBP	6.55	□□□□□ -1.36
MRPS28	YDR337W	CSM1	P25651	190 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	TFC1	P32367	649 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	ATO2	P32907	282 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	RMA1	P36001	430 aa	Known RBP	6.55	□□□□□ -1.36
MRPS28	YDR337W	TDP1	P38319	544 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	RRP3	P38712	501 aa	Known RBP	6.55	□□□□□ -1.36
MRPS28	YDR337W	FMO1	P38866	432 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	IMA5	P40884	581 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	BIR1	P47134	954 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	YJR142W	P47173	342 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	GCV1	P48015	400 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	MTR3	P48240	250 aa	Predicted RBP	6.55	□□□□□ -1.36
MRPS28	YDR337W	UPF3	P48412	387 aa	Known RBP	6.55	□□□□□ -1.36
MRPS28	YDR337W	GET1	P53192	235 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	CWC24	P53769	259 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	MPS1	P54199	764 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	SDH1	Q00711	640 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	YMR010W	Q03687	405 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	HSP31	Q04432	237 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	SPC2	Q04969	178 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	YMR034C	Q05131	434 aa	Predicted RBP	6.55	□□□□□ -1.36
MRPS28	YDR337W	YHC1	Q05900	231 aa	Known RBP	6.55	□□□□□ -1.36
MRPS28	YDR337W	YLR413W	Q06689	675 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	6.55	□□□□□ -1.36	not detected
MRPS28	YDR337W	MUM3	Q08750	479 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	RRP42	Q12277	265 aa	Predicted RBP	6.55	□□□□□ -1.36
MRPS28	YDR337W	JLP1	Q12358	412 aa		6.55	□□□□□ -1.36
MRPS28	YDR337W	ATP2	P00830	511 aa	Known RBP	6.54	□□□□□ -1.36
MRPS28	YDR337W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
MRPS28	YDR337W	ATP7	P30902	174 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	FUN30	P31380	1131 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	HXT4	P32467	576 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	RPT5	P33297	434 aa	Known RBP	6.54	□□□□□ -1.36
MRPS28	YDR337W	YKL151C	P36059	337 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	TCD2	P36101	447 aa	Known RBP	6.54	□□□□□ -1.36
MRPS28	YDR337W	MRPL17	P36528	281 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	IST2	P38250	946 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	YPT35	P38815	214 aa	Known RBP	6.54	□□□□□ -1.36
MRPS28	YDR337W	HXT6	P39003	570 aa	Known RBP	6.54	□□□□□ -1.36
MRPS28	YDR337W	HXT7	P39004	570 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	BEM4	P39011	633 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	CCT6	P39079	546 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	YJL070C	P40361	888 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	CAB2	P40506	365 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	AZF1	P41696	914 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	DIM1	P41819	318 aa	Known RBP	6.54	□□□□□ -1.36
MRPS28	YDR337W	FMP32	P43557	207 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	SGF73	P53165	657 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	YGR016W	P53209	190 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	EFR3	Q03653	782 aa	Known RBP	6.54	□□□□□ -1.36
MRPS28	YDR337W	ECM11	Q04110	302 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	YDL129W	Q07555	291 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	TFB4	Q12004	338 aa		6.54	□□□□□ -1.36
MRPS28	YDR337W	RPN5	Q12250	445 aa	Known RBP	6.54	□□□□□ -1.36
MRPS28	YDR337W	ARG81	P05085	880 aa		6.53	□□□□□ -1.36
MRPS28	YDR337W	ARG3	P05150	338 aa		6.53	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms