RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C AIM22P47051 409 aa3.42□□□□□ -1.86
RRP42YDL111C COS5P47187 383 aa3.42□□□□□ -1.86
RRP42YDL111C YGR149WP48236 432 aa3.42□□□□□ -1.86
RRP42YDL111C PYK2P52489 506 aaKnown RBP3.42□□□□□ -1.86
RRP42YDL111C YGL138CP53122 345 aa3.42□□□□□ -1.86
RRP42YDL111C CUL3P53202 744 aa3.42□□□□□ -1.86
RRP42YDL111C BTN2P53286 410 aa3.42□□□□□ -1.86
RRP42YDL111C YNL144CP53907 740 aa3.42□□□□□ -1.86
RRP42YDL111C EOS1P53938 366 aa3.42□□□□□ -1.86
RRP42YDL111C MEH1Q02205 184 aa3.42□□□□□ -1.86
RRP42YDL111C ADE13Q05911 482 aaKnown RBP3.42□□□□□ -1.86
RRP42YDL111C COS7Q07788 383 aa3.42□□□□□ -1.86
RRP42YDL111C PGC1Q08959 321 aa3.42□□□□□ -1.86
RRP42YDL111C SMF3Q12078 473 aaPredicted RBP3.42□□□□□ -1.86
RRP42YDL111C MED2Q12124 431 aa3.42□□□□□ -1.86
RRP42YDL111C HIP1P06775 603 aa3.41□□□□□ -1.86
RRP42YDL111C RHO2P06781 192 aa3.41□□□□□ -1.86
RRP42YDL111C PEP4P07267 405 aaKnown RBP3.41□□□□□ -1.86
RRP42YDL111C PPH22P23595 377 aa3.41□□□□□ -1.86
RRP42YDL111C RRP7P25368 297 aaPredicted RBP3.41□□□□□ -1.86
RRP42YDL111C SPB1P25582 841 aaPredicted RBP3.41□□□□□ -1.86
RRP42YDL111C DPH2P32461 534 aa3.41□□□□□ -1.86
RRP42YDL111C SHP1P34223 423 aa3.41□□□□□ -1.86
RRP42YDL111C YKL023WP36103 277 aaKnown RBP3.41□□□□□ -1.86
RRP42YDL111C SLM4P38247 162 aa3.41□□□□□ -1.86
RRP42YDL111C HEF3P53978 1044 aaKnown RBP3.41□□□□□ -1.86
RRP42YDL111C SLG1P54867 378 aa3.41□□□□□ -1.86
RRP42YDL111C ARP10Q04549 284 aa3.41□□□□□ -1.86
RRP42YDL111C YDR286CQ05530 114 aa3.41□□□□□ -1.86
RRP42YDL111C NCE102Q12207 173 aaRIP-Chip data3.41□□□□□ -1.86not detected
RRP42YDL111C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
RRP42YDL111C RPN5Q12250 445 aaKnown RBP3.41□□□□□ -1.86
RRP42YDL111C RAV1P47104 1357 aa3.4□□□□□ -1.86
RRP42YDL111C GPH1P06738 902 aaKnown RBP3.4□□□□□ -1.87
RRP42YDL111C COR1P07256 457 aa3.4□□□□□ -1.87
RRP42YDL111C YIM1P28625 365 aa3.4□□□□□ -1.87
RRP42YDL111C GYP6P32806 458 aa3.4□□□□□ -1.87
RRP42YDL111C THI2P38141 450 aa3.4□□□□□ -1.87
RRP42YDL111C YHR054CP38780 354 aa3.4□□□□□ -1.87
RRP42YDL111C VPS41P38959 992 aa3.4□□□□□ -1.87
RRP42YDL111C MBB1P39534 108 aa3.4□□□□□ -1.87
RRP42YDL111C PSA1P41940 361 aaKnown RBP3.4□□□□□ -1.87
RRP42YDL111C YGL108CP53139 140 aa3.4□□□□□ -1.87
RRP42YDL111C RPT4P53549 437 aaKnown RBP3.4□□□□□ -1.87
RRP42YDL111C STP1Q00947 519 aa3.4□□□□□ -1.87
RRP42YDL111C ACL4Q03771 387 aa3.4□□□□□ -1.87
RRP42YDL111C RSF1Q05043 376 aa3.4□□□□□ -1.87
RRP42YDL111C DCI1Q08558 271 aa3.4□□□□□ -1.87
RRP42YDL111C UAF30Q08747 228 aa3.4□□□□□ -1.87
RRP42YDL111C APL5Q08951 932 aaKnown RBP3.4□□□□□ -1.87
RRP42YDL111C HSP42Q12329 375 aa3.4□□□□□ -1.87
RRP42YDL111C SNF3P10870 884 aa3.39□□□□□ -1.87
RRP42YDL111C VMA2P16140 517 aaKnown RBP3.39□□□□□ -1.87
RRP42YDL111C AFG1P32317 509 aa3.39□□□□□ -1.87
RRP42YDL111C HEL1P36113 551 aa3.39□□□□□ -1.87
RRP42YDL111C ARA1P38115 344 aa3.39□□□□□ -1.87
RRP42YDL111C GDT1P38301 280 aaPredicted RBP3.39□□□□□ -1.87
RRP42YDL111C PHO90P39535 881 aa3.39□□□□□ -1.87
RRP42YDL111C EFM4P40516 257 aa3.39□□□□□ -1.87
RRP42YDL111C SNG1P46950 547 aa3.39□□□□□ -1.87
RRP42YDL111C RMD9P53140 646 aaKnown RBP3.39□□□□□ -1.87
RRP42YDL111C ATP23P53722 227 aa3.39□□□□□ -1.87
RRP42YDL111C VTC3Q02725 835 aa3.39□□□□□ -1.87
RRP42YDL111C CAC2Q04199 468 aa3.39□□□□□ -1.87
RRP42YDL111C HEL2Q05580 639 aaKnown RBP3.39□□□□□ -1.87
RRP42YDL111C MMR1Q06324 491 aa3.39□□□□□ -1.87
RRP42YDL111C YDL057WQ07379 328 aa3.39□□□□□ -1.87
RRP42YDL111C THP1Q08231 455 aa3.39□□□□□ -1.87
RRP42YDL111C GEP3Q08622 556 aa3.39□□□□□ -1.87
RRP42YDL111C YOR365CQ08844 703 aa3.39□□□□□ -1.87
RRP42YDL111C VPS54Q12071 889 aa3.39□□□□□ -1.87
RRP42YDL111C CFT2Q12102 859 aaPredicted RBP3.39□□□□□ -1.87
RRP42YDL111C RPL1AP0CX43 217 aaKnown RBP3.38□□□□□ -1.87
RRP42YDL111C RPL1BP0CX44 217 aaKnown RBP3.38□□□□□ -1.87
RRP42YDL111C PEP5P12868 1029 aa3.38□□□□□ -1.87
RRP42YDL111C SRV2P17555 526 aaKnown RBP3.38□□□□□ -1.87
RRP42YDL111C SPO7P18410 259 aa3.38□□□□□ -1.87
RRP42YDL111C RPB8P20436 146 aa3.38□□□□□ -1.87
RRP42YDL111C CLN1P20437 546 aa3.38□□□□□ -1.87
RRP42YDL111C CNA1P23287 553 aa3.38□□□□□ -1.87
RRP42YDL111C COQ3P27680 312 aa3.38□□□□□ -1.87
RRP42YDL111C BRF1P29056 596 aa3.38□□□□□ -1.87
RRP42YDL111C DAD2P36162 133 aa3.38□□□□□ -1.87
RRP42YDL111C STV1P37296 890 aa3.38□□□□□ -1.87
RRP42YDL111C ROT2P38138 954 aa3.38□□□□□ -1.87
RRP42YDL111C BNA4P38169 460 aa3.38□□□□□ -1.87
RRP42YDL111C TCM62P38228 572 aaKnown RBP3.38□□□□□ -1.87
RRP42YDL111C LAG1P38703 411 aa3.38□□□□□ -1.87
RRP42YDL111C YJR154WP47181 346 aa3.38□□□□□ -1.87
RRP42YDL111C TOM22P49334 152 aa3.38□□□□□ -1.87
RRP42YDL111C DUG3P53871 357 aa3.38□□□□□ -1.87
RRP42YDL111C YPL068CQ02749 293 aa3.38□□□□□ -1.87
RRP42YDL111C SHR3Q02774 210 aa3.38□□□□□ -1.87
RRP42YDL111C YPL107WQ02873 248 aa3.38□□□□□ -1.87
RRP42YDL111C YMR130WQ04223 302 aa3.38□□□□□ -1.87
RRP42YDL111C ORM2Q06144 216 aa3.38□□□□□ -1.87
RRP42YDL111C MCP2Q06567 569 aa3.38□□□□□ -1.87
RRP42YDL111C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
RRP42YDL111C SIL1Q08199 421 aa3.38□□□□□ -1.87
RRP42YDL111C CUE5Q08412 411 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms