RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	YMR018W	Q04364	514 aa		4.05	□□□□□ -1.76
RTG3	YBL103C	SUC2	P00724	532 aa		4.05	□□□□□ -1.76
RTG3	YBL103C	YCR007C	P25354	239 aa		4.05	□□□□□ -1.76
RTG3	YBL103C	TIF3	P34167	436 aa	Known RBP	4.05	□□□□□ -1.76
RTG3	YBL103C	YEL068C	P39977	110 aa		4.05	□□□□□ -1.76
RTG3	YBL103C	HAT2	P39984	401 aa		4.05	□□□□□ -1.76
RTG3	YBL103C	ALG8	P40351	577 aa		4.05	□□□□□ -1.76
RTG3	YBL103C	IPI3	P53877	555 aa		4.05	□□□□□ -1.76
RTG3	YBL103C	IRC15	Q02733	499 aa		4.05	□□□□□ -1.76
RTG3	YBL103C	PHO92	Q06390	306 aa		4.05	□□□□□ -1.76
RTG3	YBL103C	YBR126W-A	Q8TGU7	68 aa		4.05	□□□□□ -1.76
RTG3	YBL103C	PMR1	P13586	950 aa		4.04	□□□□□ -1.76
RTG3	YBL103C	EST1	P17214	699 aa	Predicted RBP	4.04	□□□□□ -1.76
RTG3	YBL103C	ART10	P18634	518 aa	Known RBP	4.04	□□□□□ -1.76
RTG3	YBL103C	MKT1	P40850	830 aa	Known RBP	4.04	□□□□□ -1.76
RTG3	YBL103C	RTS3	P53289	263 aa		4.04	□□□□□ -1.76
RTG3	YBL103C	NGL3	Q03210	505 aa		4.04	□□□□□ -1.76
RTG3	YBL103C	YKU80	Q04437	629 aa		4.04	□□□□□ -1.76
RTG3	YBL103C	COQ9	Q05779	260 aa		4.04	□□□□□ -1.76
RTG3	YBL103C	HNT3	Q08702	217 aa		4.04	□□□□□ -1.76
RTG3	YBL103C	CTF3	Q12748	733 aa		4.04	□□□□□ -1.76
RTG3	YBL103C	UTR4	P32626	227 aa		4.03	□□□□□ -1.76
RTG3	YBL103C	MSO1	P53604	210 aa	Known RBP	4.03	□□□□□ -1.76
RTG3	YBL103C	THP1	Q08231	455 aa		4.03	□□□□□ -1.76
RTG3	YBL103C	CDC16	P09798	840 aa		4.02	□□□□□ -1.77
RTG3	YBL103C	PUT3	P25502	979 aa	Predicted RBP	4.02	□□□□□ -1.77
RTG3	YBL103C	FUN19	P28003	413 aa	Predicted RBP	4.02	□□□□□ -1.77
RTG3	YBL103C	MRPL4	P36517	319 aa		4.02	□□□□□ -1.77
RTG3	YBL103C	DED81	P38707	554 aa	Known RBP	4.02	□□□□□ -1.77
RTG3	YBL103C	CCT6	P39079	546 aa		4.02	□□□□□ -1.77
RTG3	YBL103C	YGL242C	P53066	181 aa		4.02	□□□□□ -1.77
RTG3	YBL103C	SHE10	P53075	577 aa		4.02	□□□□□ -1.77
RTG3	YBL103C	DUO1	P53168	247 aa	Known RBP	4.02	□□□□□ -1.77
RTG3	YBL103C	VPS74	Q06385	345 aa		4.02	□□□□□ -1.77
RTG3	YBL103C	LSP1	Q12230	341 aa	Known RBP	4.02	□□□□□ -1.77
RTG3	YBL103C	LDB16	P25587	256 aa		4.01	□□□□□ -1.77
RTG3	YBL103C	MUD2	P36084	527 aa	Known RBP	4.01	□□□□□ -1.77
RTG3	YBL103C	TIF4631	P39935	952 aa	Known RBP	4.01	□□□□□ -1.77
RTG3	YBL103C	ADD37	Q03233	198 aa		4.01	□□□□□ -1.77
RTG3	YBL103C	RPC11	Q04307	110 aa	Predicted RBP	4.01	□□□□□ -1.77
RTG3	YBL103C	OPY2	Q06810	360 aa		4.01	□□□□□ -1.77
RTG3	YBL103C	HUA2	Q12134	243 aa		4.01	□□□□□ -1.77
RTG3	YBL103C	YER078W-A	Q3E7A2	54 aa		4.01	□□□□□ -1.77
RTG3	YBL103C	RNA14	P25298	677 aa	Known RBP	4	□□□□□ -1.77
RTG3	YBL103C	ELO2	P25358	347 aa		4	□□□□□ -1.77
RTG3	YBL103C	MCM10	P32354	571 aa		4	□□□□□ -1.77
RTG3	YBL103C	SHP1	P34223	423 aa		4	□□□□□ -1.77
RTG3	YBL103C	BNA4	P38169	460 aa		4	□□□□□ -1.77
RTG3	YBL103C	TCM62	P38228	572 aa	Known RBP	4	□□□□□ -1.77
RTG3	YBL103C	TOF2	Q02208	771 aa		4	□□□□□ -1.77
RTG3	YBL103C	MSN2	P33748	704 aa		3.99	□□□□□ -1.77
RTG3	YBL103C	DUG2	P38149	878 aa		3.99	□□□□□ -1.77
RTG3	YBL103C	ALG5	P40350	334 aa		3.99	□□□□□ -1.77
RTG3	YBL103C	GWT1	P47026	490 aa		3.99	□□□□□ -1.77
RTG3	YBL103C	GPI1	P53306	609 aa		3.99	□□□□□ -1.77
RTG3	YBL103C	NOP58	Q12499	511 aa	Known RBP	3.99	□□□□□ -1.77
RTG3	YBL103C	CPR1	P14832	162 aa	Known RBP	3.98	□□□□□ -1.77
RTG3	YBL103C	EXO70	P19658	623 aa		3.98	□□□□□ -1.77
RTG3	YBL103C	SEF1	P34228	1148 aa		3.98	□□□□□ -1.77
RTG3	YBL103C	ALK1	P43633	760 aa	Known RBP	3.98	□□□□□ -1.77
RTG3	YBL103C	AIM22	P47051	409 aa		3.98	□□□□□ -1.77
RTG3	YBL103C	IMD4	P50094	524 aa	Known RBP	3.98	□□□□□ -1.77
RTG3	YBL103C	YEH1	Q07804	573 aa		3.98	□□□□□ -1.77
RTG3	YBL103C	CFT2	Q12102	859 aa	Predicted RBP	3.98	□□□□□ -1.77
RTG3	YBL103C	YPT6	Q99260	215 aa		3.98	□□□□□ -1.77
RTG3	YBL103C	SSH4	P32343	579 aa		3.98	□□□□□ -1.77
RTG3	YBL103C	ELP2	P42935	788 aa		3.98	□□□□□ -1.77
RTG3	YBL103C	RBS1	Q05672	457 aa	Known RBP	3.98	□□□□□ -1.77
RTG3	YBL103C	YOR387C	Q08910	206 aa		3.98	□□□□□ -1.77
RTG3	YBL103C	VID30	P53076	958 aa		3.97	□□□□□ -1.77
RTG3	YBL103C	ZPR1	P53303	486 aa	Known RBP	3.97	□□□□□ -1.77
RTG3	YBL103C	NMD4	Q12129	218 aa		3.97	□□□□□ -1.77
RTG3	YBL103C	RKM5	Q12367	367 aa		3.97	□□□□□ -1.77
RTG3	YBL103C	MES1	P00958	751 aa	Known RBP	3.96	□□□□□ -1.78
RTG3	YBL103C	LPD1	P09624	499 aa	Known RBP	3.96	□□□□□ -1.78
RTG3	YBL103C	RFS1	P38234	210 aa	Known RBP	3.96	□□□□□ -1.78
RTG3	YBL103C	MSR1	P38714	643 aa		3.96	□□□□□ -1.78
RTG3	YBL103C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
RTG3	YBL103C	RBG2	P53295	368 aa	Known RBP	3.96	□□□□□ -1.78
RTG3	YBL103C	HEF3	P53978	1044 aa	Known RBP	3.96	□□□□□ -1.78
RTG3	YBL103C	GLK1	P17709	500 aa	Known RBP	3.95	□□□□□ -1.78
RTG3	YBL103C	PIR3	Q03180	325 aa		3.95	□□□□□ -1.78
RTG3	YBL103C	RLM1	Q12224	676 aa		3.95	□□□□□ -1.78
RTG3	YBL103C	NAM9	P27929	486 aa		3.94	□□□□□ -1.78
RTG3	YBL103C	MRP4	P32902	394 aa		3.94	□□□□□ -1.78
RTG3	YBL103C	TCD2	P36101	447 aa	Known RBP	3.94	□□□□□ -1.78
RTG3	YBL103C	FLC2	P39719	783 aa		3.94	□□□□□ -1.78
RTG3	YBL103C	CHS1	P08004	1131 aa		3.93	□□□□□ -1.78
RTG3	YBL103C	PAP1	P29468	568 aa	Known RBP	3.93	□□□□□ -1.78
RTG3	YBL103C	DEG1	P31115	442 aa	Known RBP	3.93	□□□□□ -1.78
RTG3	YBL103C	YEL045C	P32616	141 aa		3.93	□□□□□ -1.78
RTG3	YBL103C	FAA2	P39518	744 aa		3.93	□□□□□ -1.78
RTG3	YBL103C	FAU1	P40099	211 aa		3.93	□□□□□ -1.78
RTG3	YBL103C	PRE5	P40302	234 aa	Known RBP	3.93	□□□□□ -1.78
RTG3	YBL103C	YIL067C	P40514	678 aa		3.93	□□□□□ -1.78
RTG3	YBL103C	KEL3	Q08979	651 aa	Predicted RBP	3.93	□□□□□ -1.78
RTG3	YBL103C	COR1	P07256	457 aa		3.92	□□□□□ -1.78
RTG3	YBL103C	SEC53	P07283	254 aa	Known RBP	3.92	□□□□□ -1.78
RTG3	YBL103C	SPT15	P13393	240 aa	Known RBP	3.92	□□□□□ -1.78
RTG3	YBL103C	PRP2	P20095	876 aa	Predicted RBP	3.92	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 115.3 ms