RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 PTCHD1Q96NR3 888 aa8.95□□□□□ -0.98
LEMD3-206ENST00000545026 MMP19Q99542 508 aa8.95□□□□□ -0.98
LEMD3-206ENST00000545026 ZFYVE21Q9BQ24 234 aa8.95□□□□□ -0.98
LEMD3-206ENST00000545026 FAM126AQ9BYI3 521 aaPredicted RBP8.95□□□□□ -0.98
LEMD3-206ENST00000545026 PCDHA9Q9Y5H5 950 aa8.95□□□□□ -0.98
LEMD3-206ENST00000545026 NPHP3-ACAD11A0A0J9YXS1 232 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 MSCO60682 206 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 LCP1P13796 627 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 CNGA1P29973 690 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 SOX5P35711 763 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 GPR85P60893 370 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 AOC3Q16853 763 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 MSMPQ1L6U9 139 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 IQCEQ6IPM2 695 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 UBR7Q8N806 425 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 RCBTB1Q8NDN9 531 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 TMEM52Q8NDY8 209 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 ASB11Q8WXH4 323 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 VAV3Q9UKW4 847 aa8.94□□□□□ -0.98
LEMD3-206ENST00000545026 OPA1O60313 960 aa8.93□□□□□ -0.98
LEMD3-206ENST00000545026 IGFALSP35858 605 aa8.93□□□□□ -0.98
LEMD3-206ENST00000545026 CEBPAP49715 358 aaPredicted RBP8.93□□□□□ -0.98
LEMD3-206ENST00000545026 GUCY1A3Q02108 690 aa8.93□□□□□ -0.98
LEMD3-206ENST00000545026 INF2Q27J81 1249 aa8.93□□□□□ -0.98
LEMD3-206ENST00000545026 MBLAC2Q68D91 279 aa8.93□□□□□ -0.98
LEMD3-206ENST00000545026 IFNL3Q8IZI9 196 aa8.93□□□□□ -0.98
LEMD3-206ENST00000545026 PPM1KQ8N3J5 372 aa8.93□□□□□ -0.98
LEMD3-206ENST00000545026 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.93□□□□□ -0.98
LEMD3-206ENST00000545026 ERVK13-1Q9NX77 482 aa8.93□□□□□ -0.98
LEMD3-206ENST00000545026 PCDHA8Q9Y5H6 950 aa8.93□□□□□ -0.98
LEMD3-206ENST00000545026 TRBV23OR9-2A0A075B6M9 112 aa8.92□□□□□ -0.98
LEMD3-206ENST00000545026 KCNA6P17658 529 aa8.92□□□□□ -0.98
LEMD3-206ENST00000545026 RPL10P27635 214 aaKnown RBP8.92□□□□□ -0.98
LEMD3-206ENST00000545026 WAPLQ7Z5K2 1190 aa8.92□□□□□ -0.98
LEMD3-206ENST00000545026 JAMLQ86YT9 394 aa8.92□□□□□ -0.98
LEMD3-206ENST00000545026 MTFR1LQ9H019 292 aa8.92□□□□□ -0.98
LEMD3-206ENST00000545026 ARVCFO00192 962 aa8.91□□□□□ -0.98
LEMD3-206ENST00000545026 NAT1P18440 290 aa8.91□□□□□ -0.98
LEMD3-206ENST00000545026 PCBP1Q15365 356 aaKnown RBP eCLIP8.91□□□□□ -0.98
LEMD3-206ENST00000545026 PRSS36Q5K4E3 855 aa8.91□□□□□ -0.98
LEMD3-206ENST00000545026 CYP2R1Q6VVX0 501 aa8.91□□□□□ -0.98
LEMD3-206ENST00000545026 LBX2Q6XYB7 198 aa8.91□□□□□ -0.98
LEMD3-206ENST00000545026 CPNE8Q86YQ8 564 aa8.91□□□□□ -0.98
LEMD3-206ENST00000545026 AHI1Q8N157 1196 aa8.91□□□□□ -0.98
LEMD3-206ENST00000545026 MISP3Q96FF7 219 aa8.91□□□□□ -0.98
LEMD3-206ENST00000545026 ATP8A1Q9Y2Q0 1164 aa8.91□□□□□ -0.98
LEMD3-206ENST00000545026 TBC1D8O95759 1140 aa8.9□□□□□ -0.98
LEMD3-206ENST00000545026 JMJD7P0C870 316 aa8.9□□□□□ -0.98
LEMD3-206ENST00000545026 BNIP3Q12983 259 aa8.9□□□□□ -0.98
LEMD3-206ENST00000545026 CT47A1Q5JQC4 288 aaPredicted RBP8.9□□□□□ -0.98
LEMD3-206ENST00000545026 ABHD17CQ6PCB6 329 aa8.9□□□□□ -0.98
LEMD3-206ENST00000545026 MTDHQ86UE4 582 aaKnown RBP8.9□□□□□ -0.98
LEMD3-206ENST00000545026 AFAP1L2Q8N4X5 818 aa8.9□□□□□ -0.98
LEMD3-206ENST00000545026 NAT16Q8N8M0 369 aa8.9□□□□□ -0.98
LEMD3-206ENST00000545026 FCRL2Q96LA5 508 aaPredicted RBP8.9□□□□□ -0.98
LEMD3-206ENST00000545026 B4E1Z4 1266 aa8.89□□□□□ -0.99
LEMD3-206ENST00000545026 RAB11FIP3O75154 756 aa8.89□□□□□ -0.99
LEMD3-206ENST00000545026 FURINP09958 794 aa8.89□□□□□ -0.99
LEMD3-206ENST00000545026 CD96P40200 585 aa8.89□□□□□ -0.99
LEMD3-206ENST00000545026 NEK4P51957 841 aa8.89□□□□□ -0.99
LEMD3-206ENST00000545026 NFKB2Q00653 900 aa8.89□□□□□ -0.99
LEMD3-206ENST00000545026 LAPTM5Q13571 262 aa8.89□□□□□ -0.99
LEMD3-206ENST00000545026 CDCA2Q69YH5 1023 aaPredicted RBP8.89□□□□□ -0.99
LEMD3-206ENST00000545026 ZCCHC8Q6NZY4 707 aaKnown RBP8.89□□□□□ -0.99
LEMD3-206ENST00000545026 PKN3Q6P5Z2 889 aa8.89□□□□□ -0.99
LEMD3-206ENST00000545026 DDX42Q86XP3 938 aaKnown RBP eCLIP8.89□□□□□ -0.99
LEMD3-206ENST00000545026 BCL7CQ8WUZ0 217 aaPredicted RBP8.89□□□□□ -0.99
LEMD3-206ENST00000545026 LEO1Q8WVC0 666 aaPredicted RBP8.89□□□□□ -0.99
LEMD3-206ENST00000545026 G6PC3Q9BUM1 346 aa8.89□□□□□ -0.99
LEMD3-206ENST00000545026 BSDC1Q9NW68 430 aaPredicted RBP8.89□□□□□ -0.99
LEMD3-206ENST00000545026 LMCD1Q9NZU5 365 aa8.89□□□□□ -0.99
LEMD3-206ENST00000545026 C7orf72A4D263 438 aa8.88□□□□□ -0.99
LEMD3-206ENST00000545026 KPNA6O60684 536 aa8.88□□□□□ -0.99
LEMD3-206ENST00000545026 NPTXRO95502 500 aa8.88□□□□□ -0.99
LEMD3-206ENST00000545026 IGHA1P01876 353 aa8.88□□□□□ -0.99
LEMD3-206ENST00000545026 FLT3P36888 993 aa8.88□□□□□ -0.99
LEMD3-206ENST00000545026 CDKN1CP49918 316 aaPredicted RBP8.88□□□□□ -0.99
LEMD3-206ENST00000545026 IKZF1Q13422 519 aa8.88□□□□□ -0.99
LEMD3-206ENST00000545026 CFAP100Q494V2 611 aa8.88□□□□□ -0.99
LEMD3-206ENST00000545026 DDX46Q7L014 1031 aaKnown RBP8.88□□□□□ -0.99
LEMD3-206ENST00000545026 STRA8Q7Z7C7 330 aa8.88□□□□□ -0.99
LEMD3-206ENST00000545026 PRPF38AQ8NAV1 312 aaKnown RBP8.88□□□□□ -0.99
LEMD3-206ENST00000545026 PCDH19Q8TAB3 1148 aa8.88□□□□□ -0.99
LEMD3-206ENST00000545026 STAG1Q8WVM7 1258 aa8.88□□□□□ -0.99
LEMD3-206ENST00000545026 CARS2Q9HA77 564 aaKnown RBP8.88□□□□□ -0.99
LEMD3-206ENST00000545026 PCDHA2Q9Y5H9 948 aa8.88□□□□□ -0.99
LEMD3-206ENST00000545026 CKMP06732 381 aa8.87□□□□□ -0.99
LEMD3-206ENST00000545026 CDK11BP21127 795 aaKnown RBP8.87□□□□□ -0.99
LEMD3-206ENST00000545026 PAK1Q13153 545 aa8.87□□□□□ -0.99
LEMD3-206ENST00000545026 SEPT7Q16181 437 aaKnown RBP8.87□□□□□ -0.99
LEMD3-206ENST00000545026 KIZQ2M2Z5 673 aa8.87□□□□□ -0.99
LEMD3-206ENST00000545026 HLA-DQA1Q5Y7H0 255 aa8.87□□□□□ -0.99
LEMD3-206ENST00000545026 INTS5Q6P9B9 1019 aaKnown RBP8.87□□□□□ -0.99
LEMD3-206ENST00000545026 UBE2R2Q712K3 238 aaPredicted RBP8.87□□□□□ -0.99
LEMD3-206ENST00000545026 WFDC3Q8IUB2 231 aa8.87□□□□□ -0.99
LEMD3-206ENST00000545026 STK11IPQ8N1F8 1099 aa8.87□□□□□ -0.99
LEMD3-206ENST00000545026 LINC01599Q8WXQ3 324 aa8.87□□□□□ -0.99
LEMD3-206ENST00000545026 DPF3Q92784 378 aa8.87□□□□□ -0.99
LEMD3-206ENST00000545026 MAP6Q96JE9 813 aa8.87□□□□□ -0.99
LEMD3-206ENST00000545026 ALG1Q9BT22 464 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms