RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SPECC1Q5M775 1068 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 WDR45BQ5MNZ6 344 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 MAP1SQ66K74 1059 aaPredicted RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 ABHD17CQ6PCB6 329 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 LYSMD3Q7Z3D4 306 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 SRGAP1Q7Z6B7 1085 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 SAPCD2Q86UD0 394 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 PDZD3Q86UT5 571 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 FAM156AQ8NDB6 213 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.83□□□□□ -1.64
SKP1-209ENST00000522552 NSUN5Q96P11 429 aaKnown RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 HAUS7Q99871 368 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 RNF38Q9H0F5 515 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 KIAA1586Q9HCI6 787 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 MKS1Q9NXB0 559 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 TLR7Q9NYK1 1049 aaKnown RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 KLHL3Q9UH77 587 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 MRFAP1Q9Y605 127 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 M0R3H8 397 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 CBX4O00257 560 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 XPOTO43592 962 aaKnown RBP4.82□□□□□ -1.64
SKP1-209ENST00000522552 PQBP1O60828 265 aaKnown RBP4.82□□□□□ -1.64
SKP1-209ENST00000522552 ULK1O75385 1050 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 MBD4O95243 580 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 CRTAMO95727 393 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 SOD2P04179 222 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 TP53P04637 393 aaPredicted RBP4.82□□□□□ -1.64
SKP1-209ENST00000522552 TGFB3P10600 412 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 CAPN3P20807 821 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 POLD1P28340 1107 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 LSSP48449 732 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 KCNQ4P56696 695 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 ZBED6P86452 979 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 PCDH1Q08174 1060 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 LLGL1Q15334 1064 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 CDC37Q16543 378 aaPredicted RBP4.82□□□□□ -1.64
SKP1-209ENST00000522552 ZNF423Q2M1K9 1284 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 TDRD10Q5VZ19 366 aaKnown RBP4.82□□□□□ -1.64
SKP1-209ENST00000522552 TLDC1Q6P9B6 456 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 GPR155Q7Z3F1 870 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 MYCT1Q8N699 235 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 ZBTB34Q8NCN2 500 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 CLRN3Q8NCR9 226 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 DEPTORQ8TB45 409 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 NSUN6Q8TEA1 469 aaKnown RBP4.82□□□□□ -1.64
SKP1-209ENST00000522552 FGD4Q96M96 766 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 TBCBQ99426 244 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 ACO2Q99798 780 aaKnown RBP4.82□□□□□ -1.64
SKP1-209ENST00000522552 MYLK2Q9H1R3 596 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 SMC4Q9NTJ3 1288 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 SPTLC3Q9NUV7 552 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 PCDHGB6Q9Y5F9 930 aa4.82□□□□□ -1.64
SKP1-209ENST00000522552 LRRC10BA6NIK2 292 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 TRIM75PA6NK02 468 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 CBFA2T2O43439 604 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 OFD1O75665 1012 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 GLRX3O76003 335 aaKnown RBP4.81□□□□□ -1.64
SKP1-209ENST00000522552 WFS1O76024 890 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 CPP00450 1065 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 HRGP04196 525 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 PYGLP06737 847 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 HOXD8P13378 290 aaPredicted RBP4.81□□□□□ -1.64
SKP1-209ENST00000522552 KCNA6P17658 529 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 MSX1P28360 303 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 IL6STP40189 918 aaPredicted RBP4.81□□□□□ -1.64
SKP1-209ENST00000522552 PMS1P54277 932 aaKnown RBP4.81□□□□□ -1.64
SKP1-209ENST00000522552 PLAURQ03405 335 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 POU4F2Q12837 409 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 INPP5AQ14642 412 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 NTRK3Q16288 839 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 RGL3Q3MIN7 710 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 INTS11Q5TA45 600 aaKnown RBP4.81□□□□□ -1.64
SKP1-209ENST00000522552 LCE2CQ5TA81 110 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 ZSCAN30Q86W11 494 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 SLFN12Q8IYM2 578 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 DIO2Q92813 273 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 NELL1Q92832 810 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 TRIM63Q969Q1 353 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 PLPPR2Q96GM1 343 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 NELL2Q99435 816 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 KLHL25Q9H0H3 589 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 RETREG1Q9H6L5 497 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 AGO4Q9HCK5 861 aaKnown RBP4.81□□□□□ -1.64
SKP1-209ENST00000522552 ALG13Q9NP73 1137 aaKnown RBP4.81□□□□□ -1.64
SKP1-209ENST00000522552 BLOC1S4Q9NUP1 217 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 CACNA2D2Q9NY47 1150 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 PCDHA4Q9UN74 947 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 KCNH4Q9UQ05 1017 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 TRAF6Q9Y4K3 522 aa4.81□□□□□ -1.64
SKP1-209ENST00000522552 SENP3-EIF4A1A0A087X0R7 540 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 CHURC1-FNTBB4DL54 471 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 RASA4BC9J798 803 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 K7ENM7 598 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 NCAM2O15394 837 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 RASA4O43374 803 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 GAS7O60861 476 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 PPFIA3O75145 1194 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 IFIT1P09914 478 aaKnown RBP4.8□□□□□ -1.64
SKP1-209ENST00000522552 G3BP1Q13283 466 aaKnown RBP eCLIP4.8□□□□□ -1.64
SKP1-209ENST00000522552 LRRC32Q14392 662 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms