RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FNDC3BQ53EP0 1204 aaKnown RBP6.99□□□□□ -1.29
VPS36-206ENST00000497149 STYK1Q6J9G0 422 aa6.99□□□□□ -1.29
VPS36-206ENST00000497149 DIO2Q92813 273 aa6.99□□□□□ -1.29
VPS36-206ENST00000497149 PTPRN2Q92932 1015 aa6.99□□□□□ -1.29
VPS36-206ENST00000497149 MBNL3Q9NUK0 354 aaKnown RBP6.99□□□□□ -1.29
VPS36-206ENST00000497149 ADAMTS6Q9UKP5 1117 aa6.99□□□□□ -1.29
VPS36-206ENST00000497149 CD2APQ9Y5K6 639 aa6.99□□□□□ -1.29
VPS36-206ENST00000497149 KCNQ2O43526 872 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 RFPL3O75679 317 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 RNASE1P07998 156 aaKnown RBP6.98□□□□□ -1.29
VPS36-206ENST00000497149 GYS2P54840 703 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 KCNAB2Q13303 367 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 LAPTM5Q13571 262 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 C21orf62-AS1Q17RA5 79 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 INF2Q27J81 1249 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 TRIM61Q5EBN2 209 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 MBLAC2Q68D91 279 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 KCNT2Q6UVM3 1135 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 RSPO2Q6UXX9 243 aaPredicted RBP6.98□□□□□ -1.29
VPS36-206ENST00000497149 ZNF662Q6ZS27 426 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 MAMDC2Q7Z304 686 aaPredicted RBP6.98□□□□□ -1.29
VPS36-206ENST00000497149 SPPL2CQ8IUH8 684 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 ANKS4BQ8N8V4 417 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 PDZD8Q8NEN9 1154 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 CLUHP3Q96NS8 147 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 KRTAP4-12Q9BQ66 201 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 GPR27Q9NS67 375 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 C19orf73Q9NVV2 129 aa6.98□□□□□ -1.29
VPS36-206ENST00000497149 A0A1W2PQ45 241 aaPredicted RBP6.97□□□□□ -1.29
VPS36-206ENST00000497149 A0A1W2PQY0 241 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 LCP1P13796 627 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 GDNFP39905 211 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 RTP1P59025 263 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 CHRNEQ04844 493 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 PABPC4Q13310 644 aaKnown RBP eCLIP6.97□□□□□ -1.29
VPS36-206ENST00000497149 ZNF792Q3KQV3 632 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 ASXL2Q76L83 1435 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 SLCO6A1Q86UG4 719 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 JAMLQ86YT9 394 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 OXR1Q8N573 874 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 RCBTB1Q8NDN9 531 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 GSTCDQ8NEC7 633 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 SLC7A14Q8TBB6 771 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 PHF20Q9BVI0 1012 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 SLC52A2Q9HAB3 445 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 TRAF6Q9Y4K3 522 aa6.97□□□□□ -1.29
VPS36-206ENST00000497149 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.96□□□□□ -1.3
VPS36-206ENST00000497149 C7orf72A4D263 438 aa6.96□□□□□ -1.3
VPS36-206ENST00000497149 EFCAB14O75071 495 aa6.96□□□□□ -1.3
VPS36-206ENST00000497149 USP2O75604 605 aaPredicted RBP6.96□□□□□ -1.3
VPS36-206ENST00000497149 DALRD3Q5D0E6 543 aaKnown RBP6.96□□□□□ -1.3
VPS36-206ENST00000497149 MCTP1Q6DN14 999 aa6.96□□□□□ -1.3
VPS36-206ENST00000497149 CEP128Q6ZU80 1094 aa6.96□□□□□ -1.3
VPS36-206ENST00000497149 NINJ1Q92982 152 aa6.96□□□□□ -1.3
VPS36-206ENST00000497149 JMJD8Q96S16 334 aa6.96□□□□□ -1.3
VPS36-206ENST00000497149 ZFYVE21Q9BQ24 234 aa6.96□□□□□ -1.3
VPS36-206ENST00000497149 SLKQ9H2G2 1235 aaPredicted RBP6.96□□□□□ -1.3
VPS36-206ENST00000497149 NDOR1Q9UHB4 597 aa6.96□□□□□ -1.3
VPS36-206ENST00000497149 SFMBT1Q9UHJ3 866 aa6.96□□□□□ -1.3
VPS36-206ENST00000497149 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.96□□□□□ -1.3
VPS36-206ENST00000497149 FITM1A5D6W6 292 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 WTIPA6NIX2 430 aaPredicted RBP6.95□□□□□ -1.3
VPS36-206ENST00000497149 NOTOA8MTQ0 251 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 AQP7O14520 342 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 GP2P55259 537 aaKnown RBP6.95□□□□□ -1.3
VPS36-206ENST00000497149 ERVFC1P60507 584 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 GPR85P60893 370 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 NR0B2Q15466 257 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 SLC14A2Q15849 920 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 HSF5Q4G112 596 aaPredicted RBP6.95□□□□□ -1.3
VPS36-206ENST00000497149 IFNL3Q8IZI9 196 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 ABI1Q8IZP0 508 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 NLGN2Q8NFZ4 835 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 SP110Q9HB58 689 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 CTNND2Q9UQB3 1225 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 PLAAQ9Y263 795 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 PCDHA2Q9Y5H9 948 aa6.95□□□□□ -1.3
VPS36-206ENST00000497149 TIMM13Q9Y5L4 95 aaPredicted RBP6.95□□□□□ -1.3
VPS36-206ENST00000497149 NRDCO43847 1150 aa6.94□□□□□ -1.3
VPS36-206ENST00000497149 NPHS1O60500 1241 aa6.94□□□□□ -1.3
VPS36-206ENST00000497149 MSCO60682 206 aa6.94□□□□□ -1.3
VPS36-206ENST00000497149 PPP1R11O60927 126 aaPredicted RBP6.94□□□□□ -1.3
VPS36-206ENST00000497149 HPXP02790 462 aa6.94□□□□□ -1.3
VPS36-206ENST00000497149 TAF7LQ5H9L4 462 aa6.94□□□□□ -1.3
VPS36-206ENST00000497149 LBX2Q6XYB7 198 aa6.94□□□□□ -1.3
VPS36-206ENST00000497149 DPF3Q92784 378 aa6.94□□□□□ -1.3
VPS36-206ENST00000497149 ASIC4Q96FT7 647 aa6.94□□□□□ -1.3
VPS36-206ENST00000497149 TRIM39Q9HCM9 518 aa6.94□□□□□ -1.3
VPS36-206ENST00000497149 MYO1BO43795 1136 aa6.93□□□□□ -1.3
VPS36-206ENST00000497149 CRTAMO95727 393 aa6.93□□□□□ -1.3
VPS36-206ENST00000497149 GALNT18Q6P9A2 607 aa6.93□□□□□ -1.3
VPS36-206ENST00000497149 BRAPQ7Z569 592 aa6.93□□□□□ -1.3
VPS36-206ENST00000497149 DHX37Q8IY37 1157 aaKnown RBP6.93□□□□□ -1.3
VPS36-206ENST00000497149 NIM1KQ8IY84 436 aa6.93□□□□□ -1.3
VPS36-206ENST00000497149 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.93□□□□□ -1.37e-6■■■■□ 22
VPS36-206ENST00000497149 SCLYQ96I15 445 aa6.93□□□□□ -1.3
VPS36-206ENST00000497149 MAGEB10Q96LZ2 347 aaPredicted RBP6.93□□□□□ -1.3
VPS36-206ENST00000497149 C19orf44Q9H6X5 657 aa6.93□□□□□ -1.3
VPS36-206ENST00000497149 RC3H2Q9HBD1 1191 aaKnown RBP6.93□□□□□ -1.3
VPS36-206ENST00000497149 PCDHA9Q9Y5H5 950 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 370 ms