RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W RDR1Q08904 546 aa5.59□□□□□ -1.51
PRE2YPR103W PEP4P07267 405 aaKnown RBP5.58□□□□□ -1.52
PRE2YPR103W YPK3P38070 525 aa5.58□□□□□ -1.52
PRE2YPR103W ROT2P38138 954 aa5.58□□□□□ -1.52
PRE2YPR103W CST26P38226 397 aa5.58□□□□□ -1.52
PRE2YPR103W SMF1P38925 575 aa5.58□□□□□ -1.52
PRE2YPR103W AIM22P47051 409 aa5.58□□□□□ -1.52
PRE2YPR103W SCW4P53334 386 aaKnown RBP5.58□□□□□ -1.52
PRE2YPR103W FIN1Q03898 291 aa5.58□□□□□ -1.52
PRE2YPR103W UBX3Q12229 455 aa5.58□□□□□ -1.52
PRE2YPR103W RTN2Q12443 393 aa5.58□□□□□ -1.52
PRE2YPR103W YOL159C-AQ3E769 90 aa5.58□□□□□ -1.52
PRE2YPR103W VID24P38263 362 aa5.57□□□□□ -1.52
PRE2YPR103W MSR1P38714 643 aa5.57□□□□□ -1.52
PRE2YPR103W RTS2P40962 232 aa5.57□□□□□ -1.52
PRE2YPR103W FET5P43561 622 aa5.57□□□□□ -1.52
PRE2YPR103W YNL234WP53857 426 aa5.57□□□□□ -1.52
PRE2YPR103W MLH2Q07980 695 aa5.57□□□□□ -1.52
PRE2YPR103W BSC1Q12140 328 aa5.57□□□□□ -1.52
PRE2YPR103W GID7P25569 745 aa5.56□□□□□ -1.52
PRE2YPR103W MUM2P38236 366 aa5.56□□□□□ -1.52
PRE2YPR103W SPC97P38863 823 aa5.56□□□□□ -1.52
PRE2YPR103W SNG1P46950 547 aa5.56□□□□□ -1.52
PRE2YPR103W YGR126WP53274 230 aa5.56□□□□□ -1.52
PRE2YPR103W BUD32P53323 261 aa5.56□□□□□ -1.52
PRE2YPR103W SMM1P53720 384 aaKnown RBP5.56□□□□□ -1.52
PRE2YPR103W YNL181WP53878 407 aa5.56□□□□□ -1.52
PRE2YPR103W YVH1Q02256 364 aaKnown RBP5.56□□□□□ -1.52
PRE2YPR103W RIM20Q12033 661 aa5.56□□□□□ -1.52
PRE2YPR103W RRG1Q12167 365 aaPredicted RBP5.56□□□□□ -1.52
PRE2YPR103W MGR1P25573 417 aa5.55□□□□□ -1.52
PRE2YPR103W PMT1P33775 817 aa5.55□□□□□ -1.52
PRE2YPR103W RKM3P38222 552 aa5.55□□□□□ -1.52
PRE2YPR103W LAG1P38703 411 aa5.55□□□□□ -1.52
PRE2YPR103W LSM5P40089 93 aaKnown RBP5.55□□□□□ -1.52
PRE2YPR103W BET4Q00618 327 aa5.55□□□□□ -1.52
PRE2YPR103W SMA1Q02651 245 aa5.55□□□□□ -1.52
PRE2YPR103W YMR034CQ05131 434 aaPredicted RBP5.55□□□□□ -1.52
PRE2YPR103W DIC1Q06143 298 aa5.55□□□□□ -1.52
PRE2YPR103W YDL057WQ07379 328 aa5.55□□□□□ -1.52
PRE2YPR103W YOR365CQ08844 703 aa5.55□□□□□ -1.52
PRE2YPR103W ATG29Q12092 213 aa5.55□□□□□ -1.52
PRE2YPR103W RGT2Q12300 763 aa5.55□□□□□ -1.52
PRE2YPR103W SEC39Q12745 709 aa5.55□□□□□ -1.52
PRE2YPR103W EFM2P38347 419 aa5.54□□□□□ -1.52
PRE2YPR103W KEL1P38853 1164 aaKnown RBP5.54□□□□□ -1.52
PRE2YPR103W VTC2P43585 828 aa5.54□□□□□ -1.52
PRE2YPR103W TWF1P53250 332 aa5.54□□□□□ -1.52
PRE2YPR103W DUG3P53871 357 aa5.54□□□□□ -1.52
PRE2YPR103W YPL014WQ02606 381 aa5.54□□□□□ -1.52
PRE2YPR103W CDC45Q08032 650 aa5.54□□□□□ -1.52
PRE2YPR103W APL5Q08951 932 aaKnown RBP5.54□□□□□ -1.52
PRE2YPR103W AFT2Q08957 416 aa5.54□□□□□ -1.52
PRE2YPR103W PRP2P20095 876 aaPredicted RBP5.53□□□□□ -1.52
PRE2YPR103W ATO2P32907 282 aa5.53□□□□□ -1.52
PRE2YPR103W SEC66P33754 206 aa5.53□□□□□ -1.52
PRE2YPR103W YHR210CP38893 341 aa5.53□□□□□ -1.52
PRE2YPR103W YER130CP39959 443 aa5.53□□□□□ -1.52
PRE2YPR103W IAH1P41734 238 aa5.53□□□□□ -1.52
PRE2YPR103W STB2P46679 850 aa5.53□□□□□ -1.52
PRE2YPR103W TOF2Q02208 771 aa5.53□□□□□ -1.52
PRE2YPR103W YMR155WQ03795 547 aa5.53□□□□□ -1.52
PRE2YPR103W TAP42Q04372 366 aa5.53□□□□□ -1.52
PRE2YPR103W YMR254CQ04838 102 aa5.53□□□□□ -1.52
PRE2YPR103W DSE3Q08729 430 aa5.53□□□□□ -1.52
PRE2YPR103W YDL007C-AQ2V2Q0 85 aa5.53□□□□□ -1.52
PRE2YPR103W FUR1P18562 216 aaKnown RBP5.52□□□□□ -1.53
PRE2YPR103W YCR043CP25361 127 aa5.52□□□□□ -1.53
PRE2YPR103W SNC1P31109 117 aa5.52□□□□□ -1.53
PRE2YPR103W YME1P32795 747 aa5.52□□□□□ -1.53
PRE2YPR103W CMC1P36064 111 aa5.52□□□□□ -1.53
PRE2YPR103W PHD1P36093 366 aa5.52□□□□□ -1.53
PRE2YPR103W SPC34P36131 295 aa5.52□□□□□ -1.53
PRE2YPR103W DIG1Q03063 452 aaKnown RBP5.52□□□□□ -1.53
PRE2YPR103W YMR160WQ03823 816 aa5.52□□□□□ -1.53
PRE2YPR103W RQC1Q05468 723 aaKnown RBP5.52□□□□□ -1.53
PRE2YPR103W RAD52P06778 471 aaKnown RBP5.51□□□□□ -1.53
PRE2YPR103W PEP5P12868 1029 aa5.51□□□□□ -1.53
PRE2YPR103W MCM4P30665 933 aaKnown RBP5.51□□□□□ -1.53
PRE2YPR103W NFU1P32860 256 aa5.51□□□□□ -1.53
PRE2YPR103W MFT1P33441 392 aaKnown RBP5.51□□□□□ -1.53
PRE2YPR103W YKL023WP36103 277 aaKnown RBP5.51□□□□□ -1.53
PRE2YPR103W ARC40P38328 384 aaKnown RBP5.51□□□□□ -1.53
PRE2YPR103W ERG7P38604 731 aa5.51□□□□□ -1.53
PRE2YPR103W GPD2P41911 440 aaKnown RBP5.51□□□□□ -1.53
PRE2YPR103W CAF130P53280 1122 aaPredicted RBP5.51□□□□□ -1.53
PRE2YPR103W RHO4Q00246 291 aa5.51□□□□□ -1.53
PRE2YPR103W SPC19Q03954 165 aa5.51□□□□□ -1.53
PRE2YPR103W RBS1Q05672 457 aaKnown RBP5.51□□□□□ -1.53
PRE2YPR103W SSK1Q07084 712 aa5.51□□□□□ -1.53
PRE2YPR103W SNA4Q07549 140 aa5.51□□□□□ -1.53
PRE2YPR103W SAS3P34218 831 aa5.5□□□□□ -1.53
PRE2YPR103W SHP1P34223 423 aa5.5□□□□□ -1.53
PRE2YPR103W BYE1P36106 594 aa5.5□□□□□ -1.53
PRE2YPR103W TIF4631P39935 952 aaKnown RBP5.5□□□□□ -1.53
PRE2YPR103W HXT14P42833 540 aa5.5□□□□□ -1.53
PRE2YPR103W GUF1P46943 645 aa5.5□□□□□ -1.53
PRE2YPR103W YPL068CQ02749 293 aa5.5□□□□□ -1.53
PRE2YPR103W SHR3Q02774 210 aa5.5□□□□□ -1.53
PRE2YPR103W PDS5Q04264 1277 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms