RNA–Protein interactions for RNA: YPL092W

SSU1, Transcript of Plasma membrane sulfite pump involved in sulfite metabolism, yeast

Gene SSU1, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSU1	YPL092W	TOS3	P43637	560 aa		4.14	□□□□□ -1.75
SSU1	YPL092W	TAM41	P53230	385 aa		4.14	□□□□□ -1.75
SSU1	YPL092W	VPS72	Q03388	795 aa		4.14	□□□□□ -1.75
SSU1	YPL092W	COQ9	Q05779	260 aa		4.14	□□□□□ -1.75
SSU1	YPL092W	GRS2	Q06817	618 aa		4.14	□□□□□ -1.75
SSU1	YPL092W	UBC1	P21734	215 aa	Known RBP	4.14	□□□□□ -1.75
SSU1	YPL092W	DPB3	P27344	201 aa		4.14	□□□□□ -1.75
SSU1	YPL092W	YSC83	P32792	385 aa		4.14	□□□□□ -1.75
SSU1	YPL092W	UBP7	P40453	1071 aa		4.14	□□□□□ -1.75
SSU1	YPL092W	ERR3	P42222	437 aa		4.14	□□□□□ -1.75
SSU1	YPL092W	CAF130	P53280	1122 aa	Predicted RBP	4.14	□□□□□ -1.75
SSU1	YPL092W	CPR6	P53691	371 aa	Known RBP	4.14	□□□□□ -1.75
SSU1	YPL092W	HCR1	Q05775	265 aa	Known RBP	4.14	□□□□□ -1.75
SSU1	YPL092W	IWR1	Q07532	353 aa	Predicted RBP	4.14	□□□□□ -1.75
SSU1	YPL092W	SMC5	Q08204	1093 aa		4.14	□□□□□ -1.75
SSU1	YPL092W	GSH2	Q08220	491 aa		4.14	□□□□□ -1.75
SSU1	YPL092W	LEA1	Q08963	238 aa	Predicted RBP	4.14	□□□□□ -1.75
SSU1	YPL092W	OM45	P16547	393 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	RME1	P32338	300 aa	Known RBP	4.13	□□□□□ -1.75
SSU1	YPL092W	PAH1	P32567	862 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	COT1	P32798	439 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	MPE1	P35728	441 aa	Known RBP	4.13	□□□□□ -1.75
SSU1	YPL092W	MIC60	P36112	540 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	UBP13	P38187	747 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	CTM1	P38818	585 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	RTT107	P38850	1070 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	SPT8	P38915	602 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	LCB2	P40970	561 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	RTT102	P53330	157 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	YNL146W	P53906	100 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	YMR034C	Q05131	434 aa	Predicted RBP	4.13	□□□□□ -1.75
SSU1	YPL092W	CIA1	Q05583	330 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	MLH2	Q07980	695 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	IES4	Q08561	116 aa		4.13	□□□□□ -1.75
SSU1	YPL092W	ADE3	P07245	946 aa	Known RBP	4.12	□□□□□ -1.75
SSU1	YPL092W	MIS1	P09440	975 aa	Known RBP	4.12	□□□□□ -1.75
SSU1	YPL092W	PDE1	P22434	369 aa		4.12	□□□□□ -1.75
SSU1	YPL092W	UIP5	P36137	443 aa		4.12	□□□□□ -1.75
SSU1	YPL092W	MET30	P39014	640 aa		4.12	□□□□□ -1.75
SSU1	YPL092W	PUG1	P40100	303 aa		4.12	□□□□□ -1.75
SSU1	YPL092W	CAB2	P40506	365 aa		4.12	□□□□□ -1.75
SSU1	YPL092W	SAP185	P40856	1058 aa		4.12	□□□□□ -1.75
SSU1	YPL092W	BLS1	Q06071	122 aa		4.12	□□□□□ -1.75
SSU1	YPL092W	CUR1	Q06469	252 aa		4.12	□□□□□ -1.75
SSU1	YPL092W	RTP1	Q12751	981 aa		4.12	□□□□□ -1.75
SSU1	YPL092W	YBR255C-A	Q3E776	120 aa		4.12	□□□□□ -1.75
SSU1	YPL092W	RIF1	P29539	1916 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	CLB4	P24871	460 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	RPC53	P25441	422 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	MUD1	P32605	298 aa	Known RBP	4.11	□□□□□ -1.75
SSU1	YPL092W	YKL023W	P36103	277 aa	Known RBP	4.11	□□□□□ -1.75
SSU1	YPL092W	TVP23	P38962	199 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	TFG2	P41896	400 aa	Predicted RBP	4.11	□□□□□ -1.75
SSU1	YPL092W	AZR1	P50080	613 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	VID30	P53076	958 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	VPS75	P53853	264 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	PDR8	Q06149	701 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	AIM6	Q07716	390 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	NRT1	Q08485	598 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	APL4	Q12028	832 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	MED1	Q12321	566 aa		4.11	□□□□□ -1.75
SSU1	YPL092W	VPS13	Q07878	3144 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	COX4	P04037	155 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	RPL4A	P10664	362 aa	Known RBP	4.1	□□□□□ -1.75
SSU1	YPL092W	SNA3	P14359	133 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	NCP1	P16603	691 aa	Known RBP	4.1	□□□□□ -1.75
SSU1	YPL092W	PHO13	P19881	312 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	SWE1	P32944	819 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	EXO84	P38261	753 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	VID24	P38263	362 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	YBR138C	P38277	524 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
SSU1	YPL092W	YIL169C	P40442	995 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	FYV8	P46949	817 aa	Known RBP	4.1	□□□□□ -1.75
SSU1	YPL092W	RPL4B	P49626	362 aa	Known RBP	4.1	□□□□□ -1.75
SSU1	YPL092W	HSH155	P49955	971 aa	Known RBP	4.1	□□□□□ -1.75
SSU1	YPL092W	MNP1	P53163	194 aa	Predicted RBP	4.1	□□□□□ -1.75
SSU1	YPL092W	ESF2	P53743	316 aa	Known RBP	4.1	□□□□□ -1.75
SSU1	YPL092W	TIM8	P57744	87 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	TRS130	Q03660	1102 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	COG4	Q06096	861 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	ATG9	Q12142	997 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	YDR524C-B	Q3E6R4	66 aa		4.1	□□□□□ -1.75
SSU1	YPL092W	ADE4	P04046	510 aa	Known RBP	4.09	□□□□□ -1.75
SSU1	YPL092W	SPO12	P17123	173 aa		4.09	□□□□□ -1.75
SSU1	YPL092W	LAC1	P28496	418 aa		4.09	□□□□□ -1.75
SSU1	YPL092W	DPH2	P32461	534 aa		4.09	□□□□□ -1.75
SSU1	YPL092W	XRS2	P33301	854 aa		4.09	□□□□□ -1.75
SSU1	YPL092W	PCH2	P38126	564 aa		4.09	□□□□□ -1.75
SSU1	YPL092W	FAF1	P40546	346 aa	Predicted RBP	4.09	□□□□□ -1.75
SSU1	YPL092W	SGM1	P47166	707 aa		4.09	□□□□□ -1.75
SSU1	YPL092W	CUL3	P53202	744 aa		4.09	□□□□□ -1.75
SSU1	YPL092W	YPR003C	P53394	754 aa		4.09	□□□□□ -1.75
SSU1	YPL092W	ARC35	P53731	342 aa	Known RBP	4.09	□□□□□ -1.75
SSU1	YPL092W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SSU1	YPL092W	ATG21	Q02887	496 aa		4.09	□□□□□ -1.75
SSU1	YPL092W	GIR2	Q03768	265 aa	Predicted RBP	4.09	□□□□□ -1.75
SSU1	YPL092W	DON1	Q05610	365 aa		4.09	□□□□□ -1.75
SSU1	YPL092W	ECM7	Q06200	448 aa		4.09	□□□□□ -1.75
SSU1	YPL092W	SHS1	Q07657	551 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms