RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeast

Gene RET3, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET3	YPL010W	MRPL8	P22353	238 aa		4.04	□□□□□ -1.76
RET3	YPL010W	CIN8	P27895	1000 aa		4.04	□□□□□ -1.76
RET3	YPL010W	BEM1	P29366	551 aa		4.04	□□□□□ -1.76
RET3	YPL010W	TDA3	P38758	523 aa		4.04	□□□□□ -1.76
RET3	YPL010W	LRP1	P38801	184 aa	Known RBP	4.04	□□□□□ -1.76
RET3	YPL010W	SNG1	P46950	547 aa		4.04	□□□□□ -1.76
RET3	YPL010W	MNN11	P46985	422 aa	Known RBP	4.04	□□□□□ -1.76
RET3	YPL010W	SPC105	P53148	917 aa		4.04	□□□□□ -1.76
RET3	YPL010W	HST1	P53685	503 aa		4.04	□□□□□ -1.76
RET3	YPL010W	ERV41	Q04651	352 aa		4.04	□□□□□ -1.76
RET3	YPL010W	ICT1	Q12385	394 aa		4.04	□□□□□ -1.76
RET3	YPL010W	INH1	P01097	85 aa		4.03	□□□□□ -1.76
RET3	YPL010W	BI2	P03873	423 aa		4.03	□□□□□ -1.76
RET3	YPL010W	CDC9	P04819	755 aa		4.03	□□□□□ -1.76
RET3	YPL010W	PPH21	P23594	369 aa		4.03	□□□□□ -1.76
RET3	YPL010W	TFC3	P34111	1160 aa		4.03	□□□□□ -1.76
RET3	YPL010W	MIC60	P36112	540 aa		4.03	□□□□□ -1.76
RET3	YPL010W	GMH1	P36125	273 aa		4.03	□□□□□ -1.76
RET3	YPL010W	SWC5	P38326	303 aa		4.03	□□□□□ -1.76
RET3	YPL010W	STN1	P38960	494 aa		4.03	□□□□□ -1.76
RET3	YPL010W	CCT6	P39079	546 aa		4.03	□□□□□ -1.76
RET3	YPL010W	YER189W	P40104	122 aa		4.03	□□□□□ -1.76
RET3	YPL010W	YIL054W	P40524	105 aa		4.03	□□□□□ -1.76
RET3	YPL010W	MKT1	P40850	830 aa	Known RBP	4.03	□□□□□ -1.76
RET3	YPL010W	DLD2	P46681	530 aa	Known RBP	4.03	□□□□□ -1.76
RET3	YPL010W	NOP9	P47077	666 aa	Known RBP	4.03	□□□□□ -1.76
RET3	YPL010W	TCB2	P48231	1178 aa		4.03	□□□□□ -1.76
RET3	YPL010W	ASN2	P49090	572 aa	Known RBP	4.03	□□□□□ -1.76
RET3	YPL010W	UBC9	P50623	157 aa	Predicted RBP	4.03	□□□□□ -1.76
RET3	YPL010W	NBP35	P52920	328 aa		4.03	□□□□□ -1.76
RET3	YPL010W	YNL247W	P53852	767 aa	Known RBP	4.03	□□□□□ -1.76
RET3	YPL010W	IPI3	P53877	555 aa		4.03	□□□□□ -1.76
RET3	YPL010W	YNL143C	P53908	130 aa		4.03	□□□□□ -1.76
RET3	YPL010W	ELP3	Q02908	557 aa	Known RBP	4.03	□□□□□ -1.76
RET3	YPL010W	YDR131C	Q03899	556 aa		4.03	□□□□□ -1.76
RET3	YPL010W	NHX1	Q04121	633 aa		4.03	□□□□□ -1.76
RET3	YPL010W	ARG7	Q04728	441 aa		4.03	□□□□□ -1.76
RET3	YPL010W	RGC1	Q06108	1083 aa	Known RBP	4.03	□□□□□ -1.76
RET3	YPL010W	KAP95	Q06142	861 aa	Known RBP	4.03	□□□□□ -1.76
RET3	YPL010W	SEC39	Q12745	709 aa		4.03	□□□□□ -1.76
RET3	YPL010W	SEY1	Q99287	776 aa		4.03	□□□□□ -1.76
RET3	YPL010W	YOR338W	Q99326	363 aa		4.03	□□□□□ -1.76
RET3	YPL010W	Q0142	Q9ZZW4	58 aa		4.03	□□□□□ -1.76
RET3	YPL010W	BI3	Q9ZZW7	517 aa		4.03	□□□□□ -1.76
RET3	YPL010W	ERR1	P0CX10	437 aa		4.02	□□□□□ -1.77
RET3	YPL010W	ERR2	P0CX11	437 aa		4.02	□□□□□ -1.77
RET3	YPL010W	SCH9	P11792	824 aa	Known RBP	4.02	□□□□□ -1.77
RET3	YPL010W	KAR3	P17119	729 aa		4.02	□□□□□ -1.77
RET3	YPL010W	EST1	P17214	699 aa	Predicted RBP	4.02	□□□□□ -1.77
RET3	YPL010W	VPS34	P22543	875 aa		4.02	□□□□□ -1.77
RET3	YPL010W	PRP28	P23394	588 aa		4.02	□□□□□ -1.77
RET3	YPL010W	RPC25	P35718	212 aa		4.02	□□□□□ -1.77
RET3	YPL010W	YKL050C	P35736	922 aa		4.02	□□□□□ -1.77
RET3	YPL010W	SRP72	P38688	640 aa	Known RBP	4.02	□□□□□ -1.77
RET3	YPL010W	MUP3	P38734	546 aa		4.02	□□□□□ -1.77
RET3	YPL010W	SMF1	P38925	575 aa		4.02	□□□□□ -1.77
RET3	YPL010W	YEL028W	P39989	153 aa		4.02	□□□□□ -1.77
RET3	YPL010W	PAN6	P40459	309 aa		4.02	□□□□□ -1.77
RET3	YPL010W	TMA108	P40462	946 aa		4.02	□□□□□ -1.77
RET3	YPL010W	YFR018C	P43599	363 aa		4.02	□□□□□ -1.77
RET3	YPL010W	SIP4	P46954	829 aa		4.02	□□□□□ -1.77
RET3	YPL010W	PCL10	P53124	433 aa		4.02	□□□□□ -1.77
RET3	YPL010W	TEP1	P53916	434 aa		4.02	□□□□□ -1.77
RET3	YPL010W	EGD1	Q02642	157 aa	Known RBP	4.02	□□□□□ -1.77
RET3	YPL010W	INA17	Q02888	182 aa		4.02	□□□□□ -1.77
RET3	YPL010W	YMR018W	Q04364	514 aa		4.02	□□□□□ -1.77
RET3	YPL010W	POB3	Q04636	552 aa	Known RBP	4.02	□□□□□ -1.77
RET3	YPL010W	DIC1	Q06143	298 aa		4.02	□□□□□ -1.77
RET3	YPL010W	PGC1	Q08959	321 aa		4.02	□□□□□ -1.77
RET3	YPL010W	AFI1	Q99222	893 aa		4.02	□□□□□ -1.77
RET3	YPL010W	BRR2	P32639	2163 aa	Known RBP	4.02	□□□□□ -1.77
RET3	YPL010W	MEC1	P38111	2368 aa		4.01	□□□□□ -1.77
RET3	YPL010W	HOG1	P32485	435 aa		4.01	□□□□□ -1.77
RET3	YPL010W	SPR1	P32603	445 aa		4.01	□□□□□ -1.77
RET3	YPL010W	ORC2	P32833	620 aa		4.01	□□□□□ -1.77
RET3	YPL010W	CYM1	P32898	989 aa		4.01	□□□□□ -1.77
RET3	YPL010W	YET1	P35723	206 aa		4.01	□□□□□ -1.77
RET3	YPL010W	BIT2	P38346	545 aa		4.01	□□□□□ -1.77
RET3	YPL010W	SPT8	P38915	602 aa		4.01	□□□□□ -1.77
RET3	YPL010W	ERP2	P39704	215 aa		4.01	□□□□□ -1.77
RET3	YPL010W	YAL037W	P39728	267 aa		4.01	□□□□□ -1.77
RET3	YPL010W	FAU1	P40099	211 aa		4.01	□□□□□ -1.77
RET3	YPL010W	YIR014W	P40570	242 aa		4.01	□□□□□ -1.77
RET3	YPL010W	RTS3	P53289	263 aa		4.01	□□□□□ -1.77
RET3	YPL010W	SWC7	Q06707	132 aa		4.01	□□□□□ -1.77
RET3	YPL010W	DIA2	Q08496	732 aa	Predicted RBP	4.01	□□□□□ -1.77
RET3	YPL010W	RRP6	Q12149	733 aa	Known RBP	4.01	□□□□□ -1.77
RET3	YPL010W	GPM3	Q12326	303 aa		4.01	□□□□□ -1.77
RET3	YPL010W	EFG1	Q3E705	233 aa	Known RBP	4.01	□□□□□ -1.77
RET3	YPL010W	POL2	P21951	2222 aa	Known RBP	4.01	□□□□□ -1.77
RET3	YPL010W	IPP1	P00817	287 aa	Known RBP	4	□□□□□ -1.77
RET3	YPL010W	TRX1	P22217	103 aa	Known RBP	4	□□□□□ -1.77
RET3	YPL010W	GSY2	P27472	705 aa		4	□□□□□ -1.77
RET3	YPL010W	SET3	P36124	751 aa		4	□□□□□ -1.77
RET3	YPL010W	PCA1	P38360	1216 aa		4	□□□□□ -1.77
RET3	YPL010W	SMC2	P38989	1170 aa	Known RBP	4	□□□□□ -1.77
RET3	YPL010W	RPH1	P39956	796 aa		4	□□□□□ -1.77
RET3	YPL010W	TMN3	P40071	706 aa		4	□□□□□ -1.77
RET3	YPL010W	ZIM17	P42844	174 aa		4	□□□□□ -1.77
RET3	YPL010W	ROK1	P45818	564 aa	Predicted RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms