RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W BIO3P50277 480 aa3.15□□□□□ -1.91
MSH2YOL090W STR3P53101 465 aaKnown RBP3.15□□□□□ -1.91
MSH2YOL090W YGR130CP53278 816 aa3.15□□□□□ -1.91
MSH2YOL090W MNT4P53745 580 aa3.15□□□□□ -1.91
MSH2YOL090W USA1Q03714 838 aa3.15□□□□□ -1.91
MSH2YOL090W YDR179W-AQ03983 463 aa3.15□□□□□ -1.91
MSH2YOL090W SMA2Q04658 369 aa3.15□□□□□ -1.91
MSH2YOL090W STE23Q06010 1027 aa3.15□□□□□ -1.91
MSH2YOL090W VTA1Q06263 330 aa3.15□□□□□ -1.91
MSH2YOL090W NDJ1Q12366 352 aa3.15□□□□□ -1.91
MSH2YOL090W URB1P34241 1764 aaKnown RBP3.15□□□□□ -1.91
MSH2YOL090W MRP13P12686 339 aa3.14□□□□□ -1.91
MSH2YOL090W PRE10P21242 288 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
MSH2YOL090W KIN82P25341 720 aa3.14□□□□□ -1.91
MSH2YOL090W PRD1P25375 712 aa3.14□□□□□ -1.91
MSH2YOL090W RFA2P26754 273 aaKnown RBP3.14□□□□□ -1.91
MSH2YOL090W APL1P27351 700 aa3.14□□□□□ -1.91
MSH2YOL090W GAR1P28007 205 aaKnown RBP3.14□□□□□ -1.91
MSH2YOL090W PDB1P32473 366 aaKnown RBP3.14□□□□□ -1.91
MSH2YOL090W MSS1P32559 526 aaPredicted RBP3.14□□□□□ -1.91
MSH2YOL090W GIP4P39732 760 aa3.14□□□□□ -1.91
MSH2YOL090W SSO2P39926 295 aa3.14□□□□□ -1.91
MSH2YOL090W ASG1P40467 964 aa3.14□□□□□ -1.91
MSH2YOL090W YJL132WP47014 750 aa3.14□□□□□ -1.91
MSH2YOL090W BOP3P53958 396 aa3.14□□□□□ -1.91
MSH2YOL090W RPN9Q04062 393 aaKnown RBP3.14□□□□□ -1.91
MSH2YOL090W MDM36Q06820 579 aa3.14□□□□□ -1.91
MSH2YOL090W AIM41Q12032 185 aa3.14□□□□□ -1.91
MSH2YOL090W LDB17Q12342 491 aa3.14□□□□□ -1.91
MSH2YOL090W TY3B-IQ7LHG5 1498 aaKnown RBP3.14□□□□□ -1.91
MSH2YOL090W YLR415CO13578 112 aa3.14□□□□□ -1.91
MSH2YOL090W YBR085C-AO43137 85 aa3.14□□□□□ -1.91
MSH2YOL090W CBP1P07252 654 aa3.14□□□□□ -1.91
MSH2YOL090W SPE1P08432 466 aa3.14□□□□□ -1.91
MSH2YOL090W SCH9P11792 824 aaKnown RBP3.14□□□□□ -1.91
MSH2YOL090W PDA1P16387 420 aaKnown RBP3.14□□□□□ -1.91
MSH2YOL090W SPO7P18410 259 aa3.14□□□□□ -1.91
MSH2YOL090W CDC42P19073 191 aa3.14□□□□□ -1.91
MSH2YOL090W RPB4P20433 221 aaPredicted RBP3.14□□□□□ -1.91
MSH2YOL090W PPH22P23595 377 aa3.14□□□□□ -1.91
MSH2YOL090W NTH1P32356 751 aa3.14□□□□□ -1.91
MSH2YOL090W GCD7P32502 381 aaPredicted RBP3.14□□□□□ -1.91
MSH2YOL090W BUD2P33314 1104 aa3.14□□□□□ -1.91
MSH2YOL090W TUL1P36096 758 aa3.14□□□□□ -1.91
MSH2YOL090W MCX1P38323 520 aaPredicted RBP3.14□□□□□ -1.91
MSH2YOL090W FAD1P38913 306 aa3.14□□□□□ -1.91
MSH2YOL090W YFR018CP43599 363 aa3.14□□□□□ -1.91
MSH2YOL090W YGR149WP48236 432 aa3.14□□□□□ -1.91
MSH2YOL090W YGL185CP53100 379 aa3.14□□□□□ -1.91
MSH2YOL090W YGL138CP53122 345 aa3.14□□□□□ -1.91
MSH2YOL090W ECM7Q06200 448 aa3.14□□□□□ -1.91
MSH2YOL090W RBD2Q12270 262 aa3.14□□□□□ -1.91
MSH2YOL090W YLL066CQ99208 1374 aa3.14□□□□□ -1.91
MSH2YOL090W MSG5P38590 489 aa3.14□□□□□ -1.91
MSH2YOL090W ETP1P38748 585 aaKnown RBP3.14□□□□□ -1.91
MSH2YOL090W ARO9P38840 513 aaPredicted RBP3.14□□□□□ -1.91
MSH2YOL090W YJL070CP40361 888 aa3.14□□□□□ -1.91
MSH2YOL090W URM1P40554 99 aaPredicted RBP3.14□□□□□ -1.91
MSH2YOL090W RRP46P53256 223 aaPredicted RBP3.14□□□□□ -1.91
MSH2YOL090W TEX1P53851 422 aaKnown RBP3.14□□□□□ -1.91
MSH2YOL090W SEG1Q04279 960 aa3.14□□□□□ -1.91
MSH2YOL090W BOP2Q06150 570 aa3.14□□□□□ -1.91
MSH2YOL090W RTT109Q07794 436 aa3.14□□□□□ -1.91
MSH2YOL090W YDR061WQ12298 539 aa3.14□□□□□ -1.91
MSH2YOL090W GCD2P12754 651 aaPredicted RBP3.13□□□□□ -1.91
MSH2YOL090W ELO2P25358 347 aa3.13□□□□□ -1.91
MSH2YOL090W GEX1P25596 615 aa3.13□□□□□ -1.91
MSH2YOL090W SSE2P32590 693 aaKnown RBP3.13□□□□□ -1.91
MSH2YOL090W HCS1P34243 683 aa3.13□□□□□ -1.91
MSH2YOL090W PHO11P35842 467 aa3.13□□□□□ -1.91
MSH2YOL090W YKL070WP36087 169 aa3.13□□□□□ -1.91
MSH2YOL090W PHO12P38693 467 aa3.13□□□□□ -1.91
MSH2YOL090W YJL206CP39529 758 aa3.13□□□□□ -1.91
MSH2YOL090W YJL193WP39542 402 aa3.13□□□□□ -1.91
MSH2YOL090W GCN20P43535 752 aaKnown RBP3.13□□□□□ -1.91
MSH2YOL090W STB2P46679 850 aa3.13□□□□□ -1.91
MSH2YOL090W VID30P53076 958 aa3.13□□□□□ -1.91
MSH2YOL090W ARI1P53111 347 aaKnown RBP3.13□□□□□ -1.91
MSH2YOL090W HOP2P53187 214 aa3.13□□□□□ -1.91
MSH2YOL090W TIM21P53220 239 aa3.13□□□□□ -1.91
MSH2YOL090W KTR5P53966 522 aaPredicted RBP3.13□□□□□ -1.91
MSH2YOL090W YLR297WQ05899 129 aa3.13□□□□□ -1.91
MSH2YOL090W YFT2Q06676 274 aa3.13□□□□□ -1.91
MSH2YOL090W CLC1P17891 233 aa3.13□□□□□ -1.91
MSH2YOL090W SAG1P20840 650 aa3.13□□□□□ -1.91
MSH2YOL090W YIM1P28625 365 aa3.13□□□□□ -1.91
MSH2YOL090W COT1P32798 439 aa3.13□□□□□ -1.91
MSH2YOL090W CAB3P36076 571 aa3.13□□□□□ -1.91
MSH2YOL090W MRPL37P36532 105 aa3.13□□□□□ -1.91
MSH2YOL090W YBR259WP38338 688 aa3.13□□□□□ -1.91
MSH2YOL090W YNG2P38806 282 aaKnown RBP3.13□□□□□ -1.91
MSH2YOL090W SKN7P38889 622 aa3.13□□□□□ -1.91
MSH2YOL090W YMR124WP39523 943 aaKnown RBP3.13□□□□□ -1.91
MSH2YOL090W ECM1P39715 212 aa3.13□□□□□ -1.91
MSH2YOL090W TMN3P40071 706 aa3.13□□□□□ -1.91
MSH2YOL090W AIM20P40451 204 aa3.13□□□□□ -1.91
MSH2YOL090W IDS2P46958 469 aa3.13□□□□□ -1.91
MSH2YOL090W NET1P47035 1189 aa3.13□□□□□ -1.91
MSH2YOL090W RPS7BP48164 190 aaKnown RBP3.13□□□□□ -1.91
MSH2YOL090W RFX1P48743 811 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms