RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeast

Gene SWM2, Length 441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWM2	YNR004W	RFC1	P38630	861 aa	Known RBP	2.61	□□□□□ -1.99
SWM2	YNR004W	MET28	P40573	187 aa		2.61	□□□□□ -1.99
SWM2	YNR004W	LYS14	P40971	790 aa		2.61	□□□□□ -1.99
SWM2	YNR004W	DIM1	P41819	318 aa	Known RBP	2.61	□□□□□ -1.99
SWM2	YNR004W	TWF1	P53250	332 aa		2.61	□□□□□ -1.99
SWM2	YNR004W	VPS75	P53853	264 aa		2.61	□□□□□ -1.99
SWM2	YNR004W	TOF2	Q02208	771 aa		2.61	□□□□□ -1.99
SWM2	YNR004W	YML037C	Q03703	340 aa		2.61	□□□□□ -1.99
SWM2	YNR004W	DPB4	Q04603	196 aa	Known RBP	2.61	□□□□□ -1.99
SWM2	YNR004W	ECM30	Q06673	1274 aa		2.61	□□□□□ -1.99
SWM2	YNR004W	VIP1	Q06685	1146 aa	Known RBP	2.61	□□□□□ -1.99
SWM2	YNR004W	YPT6	Q99260	215 aa		2.61	□□□□□ -1.99
SWM2	YNR004W	AAC3	P18238	307 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	VPS17	P32913	551 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	YBL055C	P34220	418 aa	Predicted RBP	2.6	□□□□□ -1.99
SWM2	YNR004W	SHP1	P34223	423 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	UBP11	P36026	717 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	NUP133	P36161	1157 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	RPL32	P38061	130 aa	Known RBP	2.6	□□□□□ -1.99
SWM2	YNR004W	ROT2	P38138	954 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	YBP1	P38315	674 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	YBR225W	P38321	900 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	LEU5	P38702	357 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	FMP10	P40098	244 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	CSM2	P40465	213 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	YIR014W	P40570	242 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	IRC6	P43615	237 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	ATG27	P46989	271 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	YGR126W	P53274	230 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	MDG1	P53885	366 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	MDM1	Q01846	1127 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	SHR3	Q02774	210 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	TEN1	Q07921	160 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	RDR1	Q08904	546 aa		2.6	□□□□□ -1.99
SWM2	YNR004W	CKA1	P15790	372 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	PRD1	P25375	712 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	PGS1	P25578	521 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	RAD24	P32641	659 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	REC114	P32841	428 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	CMC1	P36064	111 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	CST26	P38226	397 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	MSR1	P38714	643 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	YHR210C	P38893	341 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	ESL1	P40456	1118 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	RTS2	P40962	232 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	PYK2	P52489	506 aa	Known RBP	2.59	□□□□□ -1.99
SWM2	YNR004W	SGF73	P53165	657 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	SOL4	P53315	255 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	YTP1	P53584	459 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	RQC1	Q05468	723 aa	Known RBP	2.59	□□□□□ -1.99
SWM2	YNR004W	GLO2	Q05584	274 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	YLR287C	Q05881	355 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	VTA1	Q06263	330 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	GRC3	Q07845	632 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	RIM20	Q12033	661 aa		2.59	□□□□□ -1.99
SWM2	YNR004W	YER145C-A	A0A023PYF4	145 aa		2.58	□□□□□ -2
SWM2	YNR004W	SNF3	P10870	884 aa		2.58	□□□□□ -2
SWM2	YNR004W	KAR3	P17119	729 aa		2.58	□□□□□ -2
SWM2	YNR004W	PRP2	P20095	876 aa	Predicted RBP	2.58	□□□□□ -2
SWM2	YNR004W	REC107	P21651	314 aa		2.58	□□□□□ -2
SWM2	YNR004W	POL4	P25615	582 aa		2.58	□□□□□ -2
SWM2	YNR004W	SYN8	P31377	255 aa		2.58	□□□□□ -2
SWM2	YNR004W	SEC66	P33754	206 aa		2.58	□□□□□ -2
SWM2	YNR004W	MTR2	P34232	184 aa	Known RBP	2.58	□□□□□ -2
SWM2	YNR004W	MNN2	P38069	597 aa		2.58	□□□□□ -2
SWM2	YNR004W	ERG7	P38604	731 aa		2.58	□□□□□ -2
SWM2	YNR004W	YJR154W	P47181	346 aa		2.58	□□□□□ -2
SWM2	YNR004W	RPS7B	P48164	190 aa	Known RBP	2.58	□□□□□ -2
SWM2	YNR004W	MRX6	P48564	524 aa		2.58	□□□□□ -2
SWM2	YNR004W	MRPL19	P53875	158 aa		2.58	□□□□□ -2
SWM2	YNR004W	RSM23	Q01163	450 aa		2.58	□□□□□ -2
SWM2	YNR004W	VPS74	Q06385	345 aa		2.58	□□□□□ -2
SWM2	YNR004W	YDL218W	Q07629	317 aa		2.58	□□□□□ -2
SWM2	YNR004W	ATG29	Q12092	213 aa		2.58	□□□□□ -2
SWM2	YNR004W	YLR112W	Q12130	139 aa		2.58	□□□□□ -2
SWM2	YNR004W	HSP42	Q12329	375 aa		2.58	□□□□□ -2
SWM2	YNR004W	SPE4	Q12455	300 aa		2.58	□□□□□ -2
SWM2	YNR004W	CYB2	P00175	591 aa		2.57	□□□□□ -2
SWM2	YNR004W	RHO2	P06781	192 aa		2.57	□□□□□ -2
SWM2	YNR004W	TYR1	P20049	452 aa		2.57	□□□□□ -2
SWM2	YNR004W	LSB5	P25369	354 aa		2.57	□□□□□ -2
SWM2	YNR004W	YME1	P32795	747 aa		2.57	□□□□□ -2
SWM2	YNR004W	TRS65	P32893	560 aa		2.57	□□□□□ -2
SWM2	YNR004W	PDR3	P33200	976 aa		2.57	□□□□□ -2
SWM2	YNR004W	PHD1	P36093	366 aa		2.57	□□□□□ -2
SWM2	YNR004W	TCD2	P36101	447 aa	Known RBP	2.57	□□□□□ -2
SWM2	YNR004W	SPC34	P36131	295 aa		2.57	□□□□□ -2
SWM2	YNR004W	CBP4	P37267	147 aa		2.57	□□□□□ -2
SWM2	YNR004W	CCT6	P39079	546 aa		2.57	□□□□□ -2
SWM2	YNR004W	NPR2	P39923	615 aa		2.57	□□□□□ -2
SWM2	YNR004W	HXT9	P40885	567 aa		2.57	□□□□□ -2
SWM2	YNR004W	RHO4	Q00246	291 aa		2.57	□□□□□ -2
SWM2	YNR004W	ADD37	Q03233	198 aa		2.57	□□□□□ -2
SWM2	YNR004W	IZH1	Q03419	316 aa		2.57	□□□□□ -2
SWM2	YNR004W	CDC23	P16522	626 aa		2.56	□□□□□ -2
SWM2	YNR004W	YCR007C	P25354	239 aa		2.56	□□□□□ -2
SWM2	YNR004W	CRM1	P30822	1084 aa	Known RBP	2.56	□□□□□ -2
SWM2	YNR004W	UTR4	P32626	227 aa		2.56	□□□□□ -2
SWM2	YNR004W	WBP1	P33767	430 aa	Known RBP	2.56	□□□□□ -2
SWM2	YNR004W	TIF3	P34167	436 aa	Known RBP	2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms