RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C STP1Q00947 519 aa3.43□□□□□ -1.86
VPS33YLR396C PFA5Q03289 374 aa3.43□□□□□ -1.86
VPS33YLR396C STE23Q06010 1027 aa3.43□□□□□ -1.86
VPS33YLR396C FRE3Q08905 711 aa3.43□□□□□ -1.86
VPS33YLR396C RRP5Q05022 1729 aaKnown RBP3.43□□□□□ -1.86
VPS33YLR396C YPT1P01123 206 aaKnown RBP3.43□□□□□ -1.86
VPS33YLR396C HXK2P04807 486 aaKnown RBP3.43□□□□□ -1.86
VPS33YLR396C SAN1P22470 610 aa3.43□□□□□ -1.86
VPS33YLR396C TKL1P23254 680 aaKnown RBP3.43□□□□□ -1.86
VPS33YLR396C GFD2P25370 566 aaKnown RBP3.43□□□□□ -1.86
VPS33YLR396C YSW1P38280 609 aa3.43□□□□□ -1.86
VPS33YLR396C TOM71P38825 639 aaKnown RBP3.43□□□□□ -1.86
VPS33YLR396C CAJ1P39101 391 aa3.43□□□□□ -1.86
VPS33YLR396C SEC9P40357 651 aa3.43□□□□□ -1.86
VPS33YLR396C PKP1P40530 394 aa3.43□□□□□ -1.86
VPS33YLR396C TFG2P41896 400 aaPredicted RBP3.43□□□□□ -1.86
VPS33YLR396C MIC19P43594 170 aa3.43□□□□□ -1.86
VPS33YLR396C VID30P53076 958 aa3.43□□□□□ -1.86
VPS33YLR396C DSD1P53095 428 aa3.43□□□□□ -1.86
VPS33YLR396C VPS75P53853 264 aa3.43□□□□□ -1.86
VPS33YLR396C ASI1P54074 624 aa3.43□□□□□ -1.86
VPS33YLR396C RPL15BP54780 204 aaPredicted RBP3.43□□□□□ -1.86
VPS33YLR396C SWF1Q04629 336 aa3.43□□□□□ -1.86
VPS33YLR396C CIR2Q08822 631 aa3.43□□□□□ -1.86
VPS33YLR396C YOR111WQ99210 232 aa3.43□□□□□ -1.86
VPS33YLR396C CDC37P06101 506 aaKnown RBP3.42□□□□□ -1.86
VPS33YLR396C RAP1P11938 827 aa3.42□□□□□ -1.86
VPS33YLR396C YEL043WP32618 956 aa3.42□□□□□ -1.86
VPS33YLR396C RPS0AP32905 252 aaKnown RBP3.42□□□□□ -1.86
VPS33YLR396C MAL33P38157 468 aa3.42□□□□□ -1.86
VPS33YLR396C FLO5P38894 1075 aa3.42□□□□□ -1.86
VPS33YLR396C YMR124WP39523 943 aaKnown RBP3.42□□□□□ -1.86
VPS33YLR396C TMA108P40462 946 aa3.42□□□□□ -1.86
VPS33YLR396C DPB11P47027 764 aaPredicted RBP3.42□□□□□ -1.86
VPS33YLR396C YPT11P48559 417 aa3.42□□□□□ -1.86
VPS33YLR396C BET4Q00618 327 aa3.42□□□□□ -1.86
VPS33YLR396C INP2Q03824 705 aa3.42□□□□□ -1.86
VPS33YLR396C CAC2Q04199 468 aa3.42□□□□□ -1.86
VPS33YLR396C YOL159CQ08300 171 aa3.42□□□□□ -1.86
VPS33YLR396C RIM20Q12033 661 aa3.42□□□□□ -1.86
VPS33YLR396C ADE6P38972 1358 aaKnown RBP3.42□□□□□ -1.86
VPS33YLR396C SEM1O94742 89 aa3.42□□□□□ -1.86
VPS33YLR396C RAD1P06777 1100 aa3.42□□□□□ -1.86
VPS33YLR396C AAC3P18238 307 aa3.42□□□□□ -1.86
VPS33YLR396C PWP1P21304 576 aaKnown RBP3.42□□□□□ -1.86
VPS33YLR396C CLB2P24869 491 aa3.42□□□□□ -1.86
VPS33YLR396C SAC1P32368 623 aaKnown RBP3.42□□□□□ -1.86
VPS33YLR396C UIP3P39547 235 aa3.42□□□□□ -1.86
VPS33YLR396C JHD1P40034 492 aa3.42□□□□□ -1.86
VPS33YLR396C TRS85P46944 698 aa3.42□□□□□ -1.86
VPS33YLR396C ILM1P47155 203 aa3.42□□□□□ -1.86
VPS33YLR396C UBP8P50102 471 aa3.42□□□□□ -1.86
VPS33YLR396C ECM22Q05958 814 aaPredicted RBP3.42□□□□□ -1.86
VPS33YLR396C YPL150WQ12152 901 aa3.42□□□□□ -1.86
VPS33YLR396C INP53Q12271 1107 aa3.42□□□□□ -1.86
VPS33YLR396C ENT1Q12518 454 aa3.42□□□□□ -1.86
VPS33YLR396C YRF1-1P0CX20 1796 aa3.42□□□□□ -1.86
VPS33YLR396C YRF1-5P0CX21 1796 aa3.42□□□□□ -1.86
VPS33YLR396C YRF1-8P0CX22 1796 aa3.42□□□□□ -1.86
VPS33YLR396C PDR18P53756 1333 aa3.41□□□□□ -1.86
VPS33YLR396C GCD2P12754 651 aaPredicted RBP3.41□□□□□ -1.86
VPS33YLR396C PRE8P23639 250 aa3.41□□□□□ -1.86
VPS33YLR396C IMP2'P32351 346 aa3.41□□□□□ -1.86
VPS33YLR396C RAD24P32641 659 aa3.41□□□□□ -1.86
VPS33YLR396C SEC66P33754 206 aa3.41□□□□□ -1.86
VPS33YLR396C SNU114P36048 1008 aaKnown RBP3.41□□□□□ -1.86
VPS33YLR396C DIA4P38705 446 aaPredicted RBP3.41□□□□□ -1.86
VPS33YLR396C RTS1P38903 757 aa3.41□□□□□ -1.86
VPS33YLR396C YRB1P41920 201 aaKnown RBP3.41□□□□□ -1.86
VPS33YLR396C LYS4P49367 693 aaPredicted RBP3.41□□□□□ -1.86
VPS33YLR396C YTP1P53584 459 aa3.41□□□□□ -1.86
VPS33YLR396C YNL144CP53907 740 aa3.41□□□□□ -1.86
VPS33YLR396C NCS2P53923 493 aaPredicted RBP3.41□□□□□ -1.86
VPS33YLR396C BOP3P53958 396 aa3.41□□□□□ -1.86
VPS33YLR396C YLR177WQ06251 628 aa3.41□□□□□ -1.86
VPS33YLR396C PSR1Q07800 427 aa3.41□□□□□ -1.86
VPS33YLR396C YPL272CQ08984 517 aa3.41□□□□□ -1.86
VPS33YLR396C RRI2Q12348 645 aa3.41□□□□□ -1.86
VPS33YLR396C JIP3O13555 125 aa3.4□□□□□ -1.86
VPS33YLR396C YPR089WO13585 888 aa3.4□□□□□ -1.86
VPS33YLR396C PHO13P19881 312 aa3.4□□□□□ -1.86
VPS33YLR396C AIM17P23180 465 aaKnown RBP3.4□□□□□ -1.86
VPS33YLR396C YCP4P25349 247 aaKnown RBP3.4□□□□□ -1.86
VPS33YLR396C BUD14P27637 709 aa3.4□□□□□ -1.86
VPS33YLR396C SAC6P32599 642 aaKnown RBP3.4□□□□□ -1.86
VPS33YLR396C ECM4P36156 370 aa3.4□□□□□ -1.86
VPS33YLR396C DUO1P53168 247 aaKnown RBP3.4□□□□□ -1.86
VPS33YLR396C JJJ1P53863 590 aa3.4□□□□□ -1.86
VPS33YLR396C TLG1Q03322 224 aa3.4□□□□□ -1.86
VPS33YLR396C TMA64Q04600 565 aaKnown RBP3.4□□□□□ -1.86
VPS33YLR396C FAR8Q05040 523 aa3.4□□□□□ -1.86
VPS33YLR396C ABP140Q08641 628 aaKnown RBP3.4□□□□□ -1.86
VPS33YLR396C ATX2Q12067 313 aa3.4□□□□□ -1.86
VPS33YLR396C YRF1-2P40105 1681 aa3.4□□□□□ -1.87
VPS33YLR396C TPM1P17536 199 aaKnown RBP3.4□□□□□ -1.87
VPS33YLR396C YCK1P23291 538 aa3.4□□□□□ -1.87
VPS33YLR396C KAR9P32526 644 aa3.4□□□□□ -1.87
VPS33YLR396C SMF1P38925 575 aa3.4□□□□□ -1.87
VPS33YLR396C NAB3P38996 802 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
VPS33YLR396C AIM20P40451 204 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms