RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	CIK1	Q01649	594 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	AAT1	Q01802	451 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	CTL1	Q03220	320 aa	Known RBP	1.49	□□□□□ -2.17
SMC4	YLR086W	YML037C	Q03703	340 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	YML053C	Q04978	212 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	PDR8	Q06149	701 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	ATX2	Q12067	313 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	GCN2	P15442	1659 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	ARG81	P05085	880 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	PEP4	P07267	405 aa	Known RBP	1.49	□□□□□ -2.17
SMC4	YLR086W	SNC1	P31109	117 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	HXT14	P42833	540 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	BNA3	P47039	444 aa	Known RBP	1.49	□□□□□ -2.17
SMC4	YLR086W	HOS2	P53096	452 aa	Predicted RBP	1.49	□□□□□ -2.17
SMC4	YLR086W	RHO4	Q00246	291 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	RPM2	Q02773	1202 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	SEG1	Q04279	960 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	HCR1	Q05775	265 aa	Known RBP	1.49	□□□□□ -2.17
SMC4	YLR086W	STP3	Q05937	343 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	BUD7	Q08754	746 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	RIM20	Q12033	661 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	MED2	Q12124	431 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	RUP1	Q12242	671 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	RHO2	P06781	192 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	RAP1	P11938	827 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	SUI2	P20459	304 aa	Known RBP	1.49	□□□□□ -2.17
SMC4	YLR086W	CLB3	P24870	427 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	YCR007C	P25354	239 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	ELO2	P25358	347 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	COQ3	P27680	312 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	SHP1	P34223	423 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	PXL1	P36166	706 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	RFC3	P38629	340 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	YMR147W	P40218	223 aa	Known RBP	1.49	□□□□□ -2.17
SMC4	YLR086W	ATG27	P46989	271 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	PET130	P47065	347 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	COS5	P47187	383 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	FMS1	P50264	508 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	COP1	P53622	1201 aa	Known RBP	1.49	□□□□□ -2.17
SMC4	YLR086W	TOF2	Q02208	771 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	KAP120	Q02932	1032 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	RSF1	Q05043	376 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	DON1	Q05610	365 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	ADE13	Q05911	482 aa	Known RBP	1.49	□□□□□ -2.17
SMC4	YLR086W	POS5	Q06892	414 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	COS7	Q07788	383 aa		1.49	□□□□□ -2.17
SMC4	YLR086W	KEL3	Q08979	651 aa	Predicted RBP	1.49	□□□□□ -2.17
SMC4	YLR086W	RTC1	Q08281	1341 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	GDB1	Q06625	1536 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	RPO21	P04050	1733 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	DOP1	Q03921	1698 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	DAL5	P15365	543 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	PDA1	P16387	420 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	DUG2	P38149	878 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	YJL068C	P40363	299 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	IAH1	P41734	238 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	GPD2	P41911	440 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	YMR160W	Q03823	816 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	ARP9	Q05123	467 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	1.48	□□□□□ -2.17	not detected
SMC4	YLR086W	HSP42	Q12329	375 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	TPM1	P17536	199 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	FUR1	P18562	216 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	KGD1	P20967	1014 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	GID7	P25569	745 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	IMG1	P25626	169 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	YCR051W	P25631	222 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	RML2	P32611	393 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	PXA2	P34230	853 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	BYE1	P36106	594 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	YPK3	P38070	525 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	LAG1	P38703	411 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	MSR1	P38714	643 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	ALG5	P40350	334 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	RPS10B	P46784	105 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	DRN1	P53255	507 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	SKO1	Q02100	647 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	YVH1	Q02256	364 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	RSC9	Q03124	581 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	NDL1	Q06568	189 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	ULS1	Q08562	1619 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	RIP1	P08067	215 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	PEP5	P12868	1029 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	APN1	P22936	367 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	PAP1	P29468	568 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	MSS51	P32335	436 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	VMA8	P32610	256 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	LTV1	P34078	463 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	YKL023W	P36103	277 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	REG2	P38232	338 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	GDT1	P38301	280 aa	Predicted RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	RIX1	P38883	763 aa	Predicted RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	CSM2	P40465	213 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	HXT9	P40885	567 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	GUF1	P46943	645 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	SMA1	Q02651	245 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	SNU56	Q03782	492 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	RPN9	Q04062	393 aa	Known RBP	1.48	□□□□□ -2.17
SMC4	YLR086W	YLR352W	Q06479	807 aa		1.48	□□□□□ -2.17
SMC4	YLR086W	RPS10A	Q08745	105 aa	Predicted RBP	1.48	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms