RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C TY2B-DR1Q12472 1770 aa2.2□□□□□ -2.06
VPS35YJL154C TY2B-OR2Q12501 1770 aa2.2□□□□□ -2.06
VPS35YJL154C YBL055CP34220 418 aaPredicted RBP2.2□□□□□ -2.06
VPS35YJL154C MPE1P35728 441 aaKnown RBP2.2□□□□□ -2.06
VPS35YJL154C MIA40P36046 403 aa2.2□□□□□ -2.06
VPS35YJL154C TSC10P38342 320 aa2.2□□□□□ -2.06
VPS35YJL154C SPC97P38863 823 aa2.2□□□□□ -2.06
VPS35YJL154C CIN4P39110 191 aa2.2□□□□□ -2.06
VPS35YJL154C IMD4P50094 524 aaKnown RBP2.2□□□□□ -2.06
VPS35YJL154C YGL082WP53155 381 aa2.2□□□□□ -2.06
VPS35YJL154C YGR126WP53274 230 aa2.2□□□□□ -2.06
VPS35YJL154C CWC22P53333 577 aaKnown RBP2.2□□□□□ -2.06
VPS35YJL154C IZH1Q03419 316 aa2.2□□□□□ -2.06
VPS35YJL154C YMR160WQ03823 816 aa2.2□□□□□ -2.06
VPS35YJL154C YDR415CQ04033 374 aaPredicted RBP2.2□□□□□ -2.06
VPS35YJL154C SPE4Q12455 300 aa2.2□□□□□ -2.06
VPS35YJL154C CBP1P07252 654 aa2.19□□□□□ -2.06
VPS35YJL154C MDM10P18409 493 aa2.19□□□□□ -2.06
VPS35YJL154C ART10P18634 518 aaKnown RBP2.19□□□□□ -2.06
VPS35YJL154C REC107P21651 314 aa2.19□□□□□ -2.06
VPS35YJL154C CLB2P24869 491 aa2.19□□□□□ -2.06
VPS35YJL154C OTU2P38747 307 aaKnown RBP2.19□□□□□ -2.06
VPS35YJL154C IRC6P43615 237 aa2.19□□□□□ -2.06
VPS35YJL154C ARE2P53629 642 aaKnown RBP2.19□□□□□ -2.06
VPS35YJL154C ASI1P54074 624 aa2.19□□□□□ -2.06
VPS35YJL154C ATG26Q06321 1198 aa2.19□□□□□ -2.06
VPS35YJL154C HER1Q12276 1246 aa2.19□□□□□ -2.06
VPS35YJL154C YPR089WO13585 888 aa2.19□□□□□ -2.06
VPS35YJL154C GAL4P04386 881 aa2.19□□□□□ -2.06
VPS35YJL154C MET17P06106 444 aa2.19□□□□□ -2.06
VPS35YJL154C PUP3P25451 205 aaKnown RBP2.19□□□□□ -2.06
VPS35YJL154C GAC1P28006 793 aa2.19□□□□□ -2.06
VPS35YJL154C TCD2P36101 447 aaKnown RBP2.19□□□□□ -2.06
VPS35YJL154C PCI8P40512 444 aa2.19□□□□□ -2.06
VPS35YJL154C MDV1P47025 714 aa2.19□□□□□ -2.06
VPS35YJL154C YNL181WP53878 407 aa2.19□□□□□ -2.06
VPS35YJL154C GSH2Q08220 491 aa2.19□□□□□ -2.06
VPS35YJL154C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06 RIP-Chip
VPS35YJL154C SNF3P10870 884 aa2.18□□□□□ -2.06
VPS35YJL154C CLB3P24870 427 aa2.18□□□□□ -2.06
VPS35YJL154C BUD5P25300 642 aaPredicted RBP2.18□□□□□ -2.06
VPS35YJL154C TOA1P32773 286 aa2.18□□□□□ -2.06
VPS35YJL154C EBP2P36049 427 aaKnown RBP2.18□□□□□ -2.06
VPS35YJL154C VID24P38263 362 aa2.18□□□□□ -2.06
VPS35YJL154C BNA3P47039 444 aaKnown RBP2.18□□□□□ -2.06
VPS35YJL154C PET130P47065 347 aa2.18□□□□□ -2.06
VPS35YJL154C LYS20P48570 428 aaKnown RBP2.18□□□□□ -2.06
VPS35YJL154C SMM1P53720 384 aaKnown RBP2.18□□□□□ -2.06
VPS35YJL154C BOP3P53958 396 aa2.18□□□□□ -2.06
VPS35YJL154C YML122CQ03207 126 aa2.18□□□□□ -2.06
VPS35YJL154C YDL057WQ07379 328 aa2.18□□□□□ -2.06
VPS35YJL154C ATX2Q12067 313 aa2.18□□□□□ -2.06
VPS35YJL154C YLR112WQ12130 139 aa2.18□□□□□ -2.06
VPS35YJL154C MRP13P12686 339 aa2.18□□□□□ -2.06
VPS35YJL154C MCM4P30665 933 aaKnown RBP2.18□□□□□ -2.06
VPS35YJL154C MGM1P32266 881 aa2.18□□□□□ -2.06
VPS35YJL154C YNK1P36010 153 aaKnown RBP2.18□□□□□ -2.06
VPS35YJL154C YKL023WP36103 277 aaKnown RBP2.18□□□□□ -2.06
VPS35YJL154C SNG1P46950 547 aa2.18□□□□□ -2.06
VPS35YJL154C CAF130P53280 1122 aaPredicted RBP2.18□□□□□ -2.06
VPS35YJL154C SSK1Q07084 712 aa2.18□□□□□ -2.06
VPS35YJL154C YOL159CQ08300 171 aa2.18□□□□□ -2.06
VPS35YJL154C ATG29Q12092 213 aa2.18□□□□□ -2.06
VPS35YJL154C RLM1Q12224 676 aa2.18□□□□□ -2.06
VPS35YJL154C SCM3Q12334 223 aa2.18□□□□□ -2.06
VPS35YJL154C MMS22Q06164 1454 aa2.18□□□□□ -2.06
VPS35YJL154C PUT2P07275 575 aa2.18□□□□□ -2.06
VPS35YJL154C SRV2P17555 526 aaKnown RBP2.18□□□□□ -2.06
VPS35YJL154C GPI10P30777 616 aa2.18□□□□□ -2.06
VPS35YJL154C NUP133P36161 1157 aa2.18□□□□□ -2.06
VPS35YJL154C MSR1P38714 643 aa2.18□□□□□ -2.06
VPS35YJL154C SGN1P40561 250 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
VPS35YJL154C MNP1P53163 194 aaPredicted RBP2.18□□□□□ -2.06
VPS35YJL154C SHR3Q02774 210 aa2.18□□□□□ -2.06
VPS35YJL154C FIN1Q03898 291 aa2.18□□□□□ -2.06
VPS35YJL154C DSE3Q08729 430 aa2.18□□□□□ -2.06
VPS35YJL154C RTN2Q12443 393 aa2.18□□□□□ -2.06
VPS35YJL154C CHC1P22137 1653 aaKnown RBP2.17□□□□□ -2.06
VPS35YJL154C ARO1P08566 1588 aaKnown RBP2.17□□□□□ -2.06
VPS35YJL154C KGD1P20967 1014 aaKnown RBP2.17□□□□□ -2.06
VPS35YJL154C DBF4P32325 704 aa2.17□□□□□ -2.06
VPS35YJL154C BYE1P36106 594 aa2.17□□□□□ -2.06
VPS35YJL154C LAG1P38703 411 aa2.17□□□□□ -2.06
VPS35YJL154C VPS41P38959 992 aa2.17□□□□□ -2.06
VPS35YJL154C YIL060WP40519 144 aa2.17□□□□□ -2.06
VPS35YJL154C IAH1P41734 238 aa2.17□□□□□ -2.06
VPS35YJL154C GPD2P41911 440 aaKnown RBP2.17□□□□□ -2.06
VPS35YJL154C ALK1P43633 760 aaKnown RBP2.17□□□□□ -2.06
VPS35YJL154C TWF1P53250 332 aa2.17□□□□□ -2.06
VPS35YJL154C SCW4P53334 386 aaKnown RBP2.17□□□□□ -2.06
VPS35YJL154C CAC2Q04199 468 aa2.17□□□□□ -2.06
VPS35YJL154C RLP24Q07915 199 aaKnown RBP2.17□□□□□ -2.06
VPS35YJL154C AFT2Q08957 416 aa2.17□□□□□ -2.06
VPS35YJL154C UBX3Q12229 455 aa2.17□□□□□ -2.06
VPS35YJL154C MYO4P32492 1471 aa2.17□□□□□ -2.06
VPS35YJL154C PDR3P33200 976 aa2.17□□□□□ -2.06
VPS35YJL154C PXA2P34230 853 aa2.17□□□□□ -2.06
VPS35YJL154C CBP4P37267 147 aa2.17□□□□□ -2.06
VPS35YJL154C CCT6P39079 546 aa2.17□□□□□ -2.06
VPS35YJL154C SSU1P41930 458 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms