RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C GYL1Q04322 720 aa5.43□□□□□ -1.54
YIR043CYIR043C YDL057WQ07379 328 aa5.43□□□□□ -1.54
YIR043CYIR043C FMP45Q07651 309 aa5.43□□□□□ -1.54
YIR043CYIR043C RRI1Q12468 440 aa5.43□□□□□ -1.54
YIR043CYIR043C ISN1Q99312 450 aa5.43□□□□□ -1.54
YIR043CYIR043C RPL31BP0C2H9 113 aaKnown RBP5.42□□□□□ -1.54
YIR043CYIR043C SNF3P10870 884 aa5.42□□□□□ -1.54
YIR043CYIR043C RPB8P20436 146 aa5.42□□□□□ -1.54
YIR043CYIR043C COQ3P27680 312 aa5.42□□□□□ -1.54
YIR043CYIR043C HCS1P34243 683 aa5.42□□□□□ -1.54
YIR043CYIR043C ARP1P38696 384 aa5.42□□□□□ -1.54
YIR043CYIR043C APE4P38821 490 aa5.42□□□□□ -1.54
YIR043CYIR043C VPS41P38959 992 aa5.42□□□□□ -1.54
YIR043CYIR043C JEM1P40358 645 aa5.42□□□□□ -1.54
YIR043CYIR043C YIL060WP40519 144 aa5.42□□□□□ -1.54
YIR043CYIR043C EAF7P53911 425 aaKnown RBP5.42□□□□□ -1.54
YIR043CYIR043C YVH1Q02256 364 aaKnown RBP5.42□□□□□ -1.54
YIR043CYIR043C YMR085WP0CF18 432 aa5.41□□□□□ -1.54
YIR043CYIR043C CLC1P17891 233 aa5.41□□□□□ -1.54
YIR043CYIR043C SUI2P20459 304 aaKnown RBP5.41□□□□□ -1.54
YIR043CYIR043C ROT2P38138 954 aa5.41□□□□□ -1.54
YIR043CYIR043C UBA4P38820 440 aa5.41□□□□□ -1.54
YIR043CYIR043C VRG4P40107 337 aa5.41□□□□□ -1.54
YIR043CYIR043C AIM22P47051 409 aa5.41□□□□□ -1.54
YIR043CYIR043C KAP120Q02932 1032 aa5.41□□□□□ -1.54
YIR043CYIR043C GAL4P04386 881 aa5.4□□□□□ -1.54
YIR043CYIR043C MDH1P17505 334 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
YIR043CYIR043C CNA1P23287 553 aa5.4□□□□□ -1.54
YIR043CYIR043C TUL1P36096 758 aa5.4□□□□□ -1.54
YIR043CYIR043C LCB2P40970 561 aa5.4□□□□□ -1.54
YIR043CYIR043C SNG1P46950 547 aa5.4□□□□□ -1.54
YIR043CYIR043C NMD5P46970 1048 aa5.4□□□□□ -1.54
YIR043CYIR043C YNL144CP53907 740 aa5.4□□□□□ -1.54
YIR043CYIR043C IDP3P53982 420 aaKnown RBP5.4□□□□□ -1.54
YIR043CYIR043C VPS9P54787 451 aa5.4□□□□□ -1.54
YIR043CYIR043C MCP2Q06567 569 aa5.4□□□□□ -1.54
YIR043CYIR043C RDR1Q08904 546 aa5.4□□□□□ -1.54
YIR043CYIR043C PAR32Q12515 295 aaKnown RBP5.4□□□□□ -1.54
YIR043CYIR043C RML2P32611 393 aa5.39□□□□□ -1.55
YIR043CYIR043C MDL1P33310 695 aa5.39□□□□□ -1.55
YIR043CYIR043C HXT9P40885 567 aa5.39□□□□□ -1.55
YIR043CYIR043C SNO3P43544 222 aa5.39□□□□□ -1.55
YIR043CYIR043C TCB2P48231 1178 aa5.39□□□□□ -1.55
YIR043CYIR043C PYK2P52489 506 aaKnown RBP5.39□□□□□ -1.55
YIR043CYIR043C SMM1P53720 384 aaKnown RBP5.39□□□□□ -1.55
YIR043CYIR043C OAZ1Q02803 292 aa5.39□□□□□ -1.55
YIR043CYIR043C YMR160WQ03823 816 aa5.39□□□□□ -1.55
YIR043CYIR043C ARP10Q04549 284 aa5.39□□□□□ -1.55
YIR043CYIR043C YDL218WQ07629 317 aa5.39□□□□□ -1.55
YIR043CYIR043C SIL1Q08199 421 aa5.39□□□□□ -1.55
YIR043CYIR043C PDH1Q12428 516 aaKnown RBP5.39□□□□□ -1.55
YIR043CYIR043C COR1P07256 457 aa5.38□□□□□ -1.55
YIR043CYIR043C PEP4P07267 405 aaKnown RBP5.38□□□□□ -1.55
YIR043CYIR043C PRP2P20095 876 aaPredicted RBP5.38□□□□□ -1.55
YIR043CYIR043C CPR2P23285 205 aa5.38□□□□□ -1.55
YIR043CYIR043C MBR1P23493 339 aa5.38□□□□□ -1.55
YIR043CYIR043C PEX2P32800 271 aa5.38□□□□□ -1.55
YIR043CYIR043C YME2P32843 850 aa5.38□□□□□ -1.55
YIR043CYIR043C SHP1P34223 423 aa5.38□□□□□ -1.55
YIR043CYIR043C GDI1P39958 451 aaKnown RBP5.38□□□□□ -1.55
YIR043CYIR043C ALK1P43633 760 aaKnown RBP5.38□□□□□ -1.55
YIR043CYIR043C NET1P47035 1189 aa5.38□□□□□ -1.55
YIR043CYIR043C YJL055WP47044 245 aa5.38□□□□□ -1.55
YIR043CYIR043C VPS25P47142 202 aa5.38□□□□□ -1.55
YIR043CYIR043C RSC9Q03124 581 aa5.38□□□□□ -1.55
YIR043CYIR043C TAP42Q04372 366 aa5.38□□□□□ -1.55
YIR043CYIR043C SOV1Q04748 898 aa5.38□□□□□ -1.55
YIR043CYIR043C THP1Q08231 455 aa5.38□□□□□ -1.55
YIR043CYIR043C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
YIR043CYIR043C EDE1P34216 1381 aa5.38□□□□□ -1.55
YIR043CYIR043C SPB1P25582 841 aaPredicted RBP5.37□□□□□ -1.55
YIR043CYIR043C RAD14P28519 371 aa5.37□□□□□ -1.55
YIR043CYIR043C DPH2P32461 534 aa5.37□□□□□ -1.55
YIR043CYIR043C VPH1P32563 840 aaKnown RBP5.37□□□□□ -1.55
YIR043CYIR043C YKL023WP36103 277 aaKnown RBP5.37□□□□□ -1.55
YIR043CYIR043C MBB1P39534 108 aa5.37□□□□□ -1.55
YIR043CYIR043C CAK1P43568 368 aaPredicted RBP5.37□□□□□ -1.55
YIR043CYIR043C ATG27P46989 271 aa5.37□□□□□ -1.55
YIR043CYIR043C COP1P53622 1201 aaKnown RBP5.37□□□□□ -1.55
YIR043CYIR043C DON1Q05610 365 aa5.37□□□□□ -1.55
YIR043CYIR043C NCE102Q12207 173 aaRIP-Chip data5.37□□□□□ -1.55not detected
YIR043CYIR043C GPM3Q12326 303 aa5.37□□□□□ -1.55
YIR043CYIR043C NAT1P12945 854 aaKnown RBP5.36□□□□□ -1.55
YIR043CYIR043C SRV2P17555 526 aaKnown RBP5.36□□□□□ -1.55
YIR043CYIR043C IDH2P28241 369 aaKnown RBP5.36□□□□□ -1.55
YIR043CYIR043C YIM1P28625 365 aa5.36□□□□□ -1.55
YIR043CYIR043C AFG1P32317 509 aa5.36□□□□□ -1.55
YIR043CYIR043C RXT2P38255 430 aa5.36□□□□□ -1.55
YIR043CYIR043C NTC20P38302 140 aaPredicted RBP5.36□□□□□ -1.55
YIR043CYIR043C ULP2P40537 1034 aaPredicted RBP5.36□□□□□ -1.55
YIR043CYIR043C BUD27P43573 796 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
YIR043CYIR043C YGR149WP48236 432 aa5.36□□□□□ -1.55
YIR043CYIR043C PKP2P53170 491 aa5.36□□□□□ -1.55
YIR043CYIR043C ERG13P54839 491 aaKnown RBP5.36□□□□□ -1.55
YIR043CYIR043C RRP45Q05636 305 aaKnown RBP5.36□□□□□ -1.55
YIR043CYIR043C CTF3Q12748 733 aa5.36□□□□□ -1.55
YIR043CYIR043C RAV1P47104 1357 aa5.36□□□□□ -1.55
YIR043CYIR043C CBP1P07252 654 aa5.35□□□□□ -1.55
YIR043CYIR043C RRT2P38332 387 aa5.35□□□□□ -1.55
YIR043CYIR043C FLO5P38894 1075 aa5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms