RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B UBA4P38820 440 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B APE4P38821 490 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B MRX5P47007 382 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B GLG2P47011 380 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B HCH1P53834 153 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B VAC7P53950 1165 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B RSM28Q03430 361 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B SYF1Q04048 859 aaPredicted RBP1.61□□□□□ -2.15
YGR109W-BYGR109W-B CRF1Q04930 467 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B SDH5Q08230 162 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B DIN7Q12086 430 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B PGI1P12709 554 aaKnown RBP1.61□□□□□ -2.15
YGR109W-BYGR109W-B SPO16P17122 198 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B YAP1P19880 650 aaKnown RBP1.61□□□□□ -2.15
YGR109W-BYGR109W-B CMK1P27466 446 aaKnown RBP1.61□□□□□ -2.15
YGR109W-BYGR109W-B KRE2P27809 442 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B PDB1P32473 366 aaKnown RBP1.61□□□□□ -2.15
YGR109W-BYGR109W-B PMT1P33775 817 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B OLA1P38219 394 aaKnown RBP1.61□□□□□ -2.15
YGR109W-BYGR109W-B NOP16P40007 231 aaKnown RBP1.61□□□□□ -2.15
YGR109W-BYGR109W-B IDS2P46958 469 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B LUC7Q07508 261 aaPredicted RBP1.61□□□□□ -2.15
YGR109W-BYGR109W-B PEX15Q08215 383 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B GET3Q12154 354 aaKnown RBP1.61□□□□□ -2.15
YGR109W-BYGR109W-B RAD61Q99359 647 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B CDC26P14724 124 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B SEC63P14906 663 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B RPF2P36160 344 aaKnown RBP1.61□□□□□ -2.15
YGR109W-BYGR109W-B FLC2P39719 783 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B PHM8P40025 321 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B YIL024CP40543 189 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B PTR3P43606 678 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B YDL183CP48569 320 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B MRPL19P53875 158 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B GRX3Q03835 250 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B INM2Q05533 292 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B ECI1Q05871 280 aa1.61□□□□□ -2.15
YGR109W-BYGR109W-B SNF1P06782 633 aaKnown RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B CDC24P11433 854 aaPredicted RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B SAR1P20606 190 aaKnown RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B CMK2P22517 447 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B DEP1P31385 405 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B PET309P32522 965 aaPredicted RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B MAL32P38158 584 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B SSO2P39926 295 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B PCL6P40038 420 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B FMP10P40098 244 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B IRC5P43610 853 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B URB2P47108 1174 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B USE1P53146 245 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B MAL12P53341 584 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B CUS2P53830 285 aaPredicted RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B NGL1Q08213 363 aaKnown RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B RUP1Q12242 671 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B YBR255C-AQ3E776 120 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B YER175W-AQ8TGU4 54 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B YBR126W-AQ8TGU7 68 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B PNO1Q99216 274 aaKnown RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B GLN4P13188 809 aaKnown RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B PDE1P22434 369 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B ZIP1P31111 875 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B VMA8P32610 256 aaKnown RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B RTT105P40063 208 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B IZH1Q03419 316 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B GYL1Q04322 720 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B KRE28Q04431 385 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B ADE13Q05911 482 aaKnown RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B SWA2Q06677 668 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B CYK3Q07533 885 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B CRD1Q07560 283 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B SRL1Q08673 210 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B NUP157P40064 1391 aaKnown RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B SNF2P22082 1703 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B RPB2P08518 1224 aaKnown RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B MAS2P11914 482 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B NCP1P16603 691 aaKnown RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B SIR1P21691 654 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B RDS1P25611 832 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B PDC2P32896 925 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B YKL063CP35725 167 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B RSM25P40496 264 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B ORC5P50874 479 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B DNM1P54861 757 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B TMA20P89886 181 aaPredicted RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B PSR1Q07800 427 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B SSP2Q08646 371 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B FRE7Q12333 620 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B LAG2Q92325 660 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B SEM1O94742 89 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B GAL7P08431 366 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B ART10P18634 518 aaKnown RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B CLN1P20437 546 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B POT1P27796 417 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
YGR109W-BYGR109W-B SPC110P32380 944 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B HXT4P32467 576 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B IME2P32581 645 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B UBC6P33296 250 aaPredicted RBP1.6□□□□□ -2.15
YGR109W-BYGR109W-B PCH2P38126 564 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B FAT1P38225 669 aa1.6□□□□□ -2.15
YGR109W-BYGR109W-B ICS2P38284 255 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms