RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN12, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN12	YFR052W	BUD32	P53323	261 aa		4.98	□□□□□ -1.61
RPN12	YFR052W	VTA1	Q06263	330 aa		4.98	□□□□□ -1.61
RPN12	YFR052W	RSC3	Q06639	885 aa		4.98	□□□□□ -1.61
RPN12	YFR052W	CDA2	Q06703	312 aa		4.98	□□□□□ -1.61
RPN12	YFR052W	PFA4	Q12006	378 aa		4.98	□□□□□ -1.61
RPN12	YFR052W	WHI5	Q12416	295 aa		4.98	□□□□□ -1.61
RPN12	YFR052W	YMR030W-A	Q3E760	96 aa		4.98	□□□□□ -1.61
RPN12	YFR052W	PHO5	P00635	467 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	ADH4	P10127	382 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	GPA2	P10823	449 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	NPR1	P22211	790 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	YSR3	P23501	404 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	PPH21	P23594	369 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	ATP11	P32453	318 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	CYM1	P32898	989 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	YSW1	P38280	609 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	DED81	P38707	554 aa	Known RBP	4.97	□□□□□ -1.61
RPN12	YFR052W	OCA5	P38738	679 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	YHL008C	P38750	627 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	ERV46	P39727	415 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	YEL073C	P39974	107 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	SMX2	P40204	77 aa	Known RBP	4.97	□□□□□ -1.61
RPN12	YFR052W	UTP18	P40362	594 aa	Predicted RBP	4.97	□□□□□ -1.61
RPN12	YFR052W	HOS4	P40480	1083 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	YFR018C	P43599	363 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	URB2	P47108	1174 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	BIR1	P47134	954 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	HXT16	P47185	567 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	HXT15	P54854	567 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
RPN12	YFR052W	AAT1	Q01802	451 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	TAF12	Q03761	539 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	TRM12	Q04235	462 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	YDR109C	Q04585	715 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	THI73	Q07904	523 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	PLB3	Q08108	686 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	YOR223W	Q12015	292 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	UBX3	Q12229	455 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	ICT1	Q12385	394 aa		4.97	□□□□□ -1.61
RPN12	YFR052W	CMR1	Q12510	522 aa	Known RBP	4.97	□□□□□ -1.61
RPN12	YFR052W	SSC1	P0CS90	654 aa	Known RBP	4.96	□□□□□ -1.62
RPN12	YFR052W	HRR25	P29295	494 aa	Known RBP	4.96	□□□□□ -1.62
RPN12	YFR052W	MF(ALPHA)2	P32435	120 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	CCT6	P39079	546 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	YJL206C	P39529	758 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	ELO1	P39540	310 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	ZIM17	P42844	174 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	GAT1	P43574	510 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	TIS11	P47977	285 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	BIO4	P53630	237 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	TGL2	P54857	326 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	YAT1	P80235	687 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	SHR3	Q02774	210 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	YMR209C	Q03648	457 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	ROT1	Q03691	256 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	USA1	Q03714	838 aa		4.96	□□□□□ -1.62
RPN12	YFR052W	SSL1	Q04673	461 aa	Predicted RBP	4.96	□□□□□ -1.62
RPN12	YFR052W	SEM1	O94742	89 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	ILV2	P07342	687 aa	Known RBP	4.95	□□□□□ -1.62
RPN12	YFR052W	SCL1	P21243	252 aa	Known RBP	4.95	□□□□□ -1.62
RPN12	YFR052W	MRPL25	P23369	157 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	PHO84	P25297	587 aa	Known RBP	4.95	□□□□□ -1.62
RPN12	YFR052W	AAD3	P25612	363 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	HEM3	P28789	327 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	YME1	P32795	747 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	TIP20	P33891	701 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	THI80	P35202	319 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	DEF1	P35732	738 aa	Known RBP	4.95	□□□□□ -1.62
RPN12	YFR052W	RRP14	P36080	434 aa	Known RBP	4.95	□□□□□ -1.62
RPN12	YFR052W	EFM1	P38732	585 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	UBA4	P38820	440 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	SPC97	P38863	823 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	FAA3	P39002	694 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	HAT2	P39984	401 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	PFA3	P42836	336 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	YJR039W	P47107	1121 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	NNF1	P47149	201 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	NRM1	P53718	249 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	SLT2	Q00772	484 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	SPP2	Q02521	185 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	GOT1	Q03554	138 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	CTK1	Q03957	528 aa	Known RBP	4.95	□□□□□ -1.62
RPN12	YFR052W	CSN9	Q03981	162 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	BLS1	Q06071	122 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	CHS5	Q12114	671 aa	Known RBP	4.95	□□□□□ -1.62
RPN12	YFR052W	PST1	Q12355	444 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	GPR1	Q12361	961 aa		4.95	□□□□□ -1.62
RPN12	YFR052W	CDC21	P06785	304 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	ABF1	P14164	731 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	GAS1	P22146	559 aa	Known RBP	4.94	□□□□□ -1.62
RPN12	YFR052W	PTM1	P32857	523 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	BEM3	P32873	1128 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	ASK1	P35734	292 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	RPF2	P36160	344 aa	Known RBP	4.94	□□□□□ -1.62
RPN12	YFR052W	PIM1	P36775	1133 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	MUM2	P38236	366 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	YHR020W	P38708	688 aa	Known RBP	4.94	□□□□□ -1.62
RPN12	YFR052W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
RPN12	YFR052W	MNN1	P39106	762 aa		4.94	□□□□□ -1.62
RPN12	YFR052W	PEP8	P40335	379 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms