RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	SUL1	P38359	859 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	MUP3	P38734	546 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	YHL017W	P38745	532 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	RIX1	P38883	763 aa	Predicted RBP	4.76	□□□□□ -1.65
UBC1	YDR177W	BDH2	P39713	417 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	RTT105	P40063	208 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	YTA12	P40341	825 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	VMA13	P41807	478 aa	Known RBP	4.76	□□□□□ -1.65
UBC1	YDR177W	YFR020W	P43600	232 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	STU2	P46675	888 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	BUL1	P48524	976 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	ALT2	P52892	507 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	ERG26	P53199	349 aa	Known RBP	4.76	□□□□□ -1.65
UBC1	YDR177W	SMX3	P54999	86 aa	Predicted RBP	4.76	□□□□□ -1.65
UBC1	YDR177W	RPN9	Q04062	393 aa	Known RBP	4.76	□□□□□ -1.65
UBC1	YDR177W	RBS1	Q05672	457 aa	Known RBP	4.76	□□□□□ -1.65
UBC1	YDR177W	DBP9	Q06218	594 aa	Known RBP	4.76	□□□□□ -1.65
UBC1	YDR177W	TEN1	Q07921	160 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	APL5	Q08951	932 aa	Known RBP	4.76	□□□□□ -1.65
UBC1	YDR177W	YLR049C	Q12110	428 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	MDY2	Q12285	212 aa		4.76	□□□□□ -1.65
UBC1	YDR177W	ARG81	P05085	880 aa		4.75	□□□□□ -1.65
UBC1	YDR177W	LPD1	P09624	499 aa	Known RBP	4.75	□□□□□ -1.65
UBC1	YDR177W	RPL31B	P0C2H9	113 aa	Known RBP	4.75	□□□□□ -1.65
UBC1	YDR177W	CLN1	P20437	546 aa		4.75	□□□□□ -1.65
UBC1	YDR177W	PPH22	P23595	377 aa		4.75	□□□□□ -1.65
UBC1	YDR177W	MCM4	P30665	933 aa	Known RBP	4.75	□□□□□ -1.65
UBC1	YDR177W	ADE17	P38009	592 aa	Known RBP	4.75	□□□□□ -1.65
UBC1	YDR177W	RPL32	P38061	130 aa	Known RBP	4.75	□□□□□ -1.65
UBC1	YDR177W	CHS6	P40955	746 aa		4.75	□□□□□ -1.65
UBC1	YDR177W	ALK1	P43633	760 aa	Known RBP	4.75	□□□□□ -1.65
UBC1	YDR177W	YJL132W	P47014	750 aa		4.75	□□□□□ -1.65
UBC1	YDR177W	RPT4	P53549	437 aa	Known RBP	4.75	□□□□□ -1.65
UBC1	YDR177W	PDR16	P53860	351 aa	Known RBP	4.75	□□□□□ -1.65
UBC1	YDR177W	TOF2	Q02208	771 aa		4.75	□□□□□ -1.65
UBC1	YDR177W	ACL4	Q03771	387 aa		4.75	□□□□□ -1.65
UBC1	YDR177W	EMI2	Q04409	500 aa	Known RBP	4.75	□□□□□ -1.65
UBC1	YDR177W	ARO10	Q06408	635 aa		4.75	□□□□□ -1.65
UBC1	YDR177W	ATG9	Q12142	997 aa		4.75	□□□□□ -1.65
UBC1	YDR177W	GPH1	P06738	902 aa	Known RBP	4.74	□□□□□ -1.65
UBC1	YDR177W	RHO2	P06781	192 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	RAP1	P11938	827 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	KGD1	P20967	1014 aa	Known RBP	4.74	□□□□□ -1.65
UBC1	YDR177W	GRR1	P24814	1151 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	BUD5	P25300	642 aa	Predicted RBP	4.74	□□□□□ -1.65
UBC1	YDR177W	GAC1	P28006	793 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	SRB2	P34162	210 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	YSW1	P38280	609 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	TSC10	P38342	320 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	PCL5	P38794	229 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	CPR8	P53728	308 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	RHO5	P53879	331 aa	Known RBP	4.74	□□□□□ -1.65
UBC1	YDR177W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
UBC1	YDR177W	RAD33	Q04231	177 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	YFH1	Q07540	174 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	UAF30	Q08747	228 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	PSY3	Q12318	242 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	YIL002W-A	Q3E7Z5	69 aa		4.74	□□□□□ -1.65
UBC1	YDR177W	SNT1	P25357	1226 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	HCM1	P25364	564 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	AFG1	P32317	509 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	NIP1	P32497	812 aa	Known RBP	4.73	□□□□□ -1.65
UBC1	YDR177W	REC114	P32841	428 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	TSA1	P34760	196 aa	Known RBP	4.73	□□□□□ -1.65
UBC1	YDR177W	MRPL4	P36517	319 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	PPS1	P38148	807 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	VPS45	P38932	577 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	CUE3	P53137	624 aa	Known RBP	4.73	□□□□□ -1.65
UBC1	YDR177W	RMD9	P53140	646 aa	Known RBP	4.73	□□□□□ -1.65
UBC1	YDR177W	DCS1	Q06151	350 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	ECM30	Q06673	1274 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	CDA2	Q06703	312 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	RLP24	Q07915	199 aa	Known RBP	4.73	□□□□□ -1.65
UBC1	YDR177W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
UBC1	YDR177W	NTO1	Q12311	748 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	TRM13	Q12383	476 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	MTR10	Q99189	972 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	RAV1	P47104	1357 aa		4.73	□□□□□ -1.65
UBC1	YDR177W	YMR085W	P0CF18	432 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	TAL1	P15019	335 aa	Known RBP	4.72	□□□□□ -1.65
UBC1	YDR177W	MSS51	P32335	436 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	THI2	P38141	450 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	FET5	P43561	622 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	SHE4	P51534	789 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	YGR126W	P53274	230 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	COP1	P53622	1201 aa	Known RBP	4.72	□□□□□ -1.65
UBC1	YDR177W	YNR068C	P53754	272 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	AQR1	P53943	586 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	TIM44	Q01852	431 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	PFA5	Q03289	374 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	RRB1	Q04225	511 aa	Known RBP	4.72	□□□□□ -1.65
UBC1	YDR177W	THI3	Q07471	609 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	YLR040C	Q07988	224 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	SIL1	Q08199	421 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	HIR3	P47171	1648 aa		4.72	□□□□□ -1.65
UBC1	YDR177W	BI2	P03873	423 aa		4.71	□□□□□ -1.66
UBC1	YDR177W	PET111	P08468	800 aa		4.71	□□□□□ -1.66
UBC1	YDR177W	KRS1	P15180	591 aa	Known RBP	4.71	□□□□□ -1.66
UBC1	YDR177W	DMC1	P25453	334 aa		4.71	□□□□□ -1.66
UBC1	YDR177W	NDI1	P32340	513 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms