RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C CGR1P53188 120 aa5.69□□□□□ -1.5
SEC18YBR080C YGR117CP53270 476 aa5.69□□□□□ -1.5
SEC18YBR080C YNL144CP53907 740 aa5.69□□□□□ -1.5
SEC18YBR080C KTR5P53966 522 aaPredicted RBP5.69□□□□□ -1.5
SEC18YBR080C YPL108WQ02872 168 aaPredicted RBP5.69□□□□□ -1.5
SEC18YBR080C DOT1Q04089 582 aaKnown RBP5.69□□□□□ -1.5
SEC18YBR080C FRE3Q08905 711 aa5.69□□□□□ -1.5
SEC18YBR080C ERG27Q12452 347 aaKnown RBP5.69□□□□□ -1.5
SEC18YBR080C CFT1Q06632 1357 aaKnown RBP5.69□□□□□ -1.5
SEC18YBR080C YLR278CQ05854 1341 aa5.69□□□□□ -1.5
SEC18YBR080C PPH22P23595 377 aa5.69□□□□□ -1.5
SEC18YBR080C RVS161P25343 265 aaKnown RBP5.69□□□□□ -1.5
SEC18YBR080C YIM1P28625 365 aa5.69□□□□□ -1.5
SEC18YBR080C MCM4P30665 933 aaKnown RBP5.69□□□□□ -1.5
SEC18YBR080C HCS1P34243 683 aa5.69□□□□□ -1.5
SEC18YBR080C MAK5P38112 773 aaPredicted RBP5.69□□□□□ -1.5
SEC18YBR080C PZF1P39933 429 aa5.69□□□□□ -1.5
SEC18YBR080C FKH2P41813 862 aa5.69□□□□□ -1.5
SEC18YBR080C PRP31P49704 494 aaPredicted RBP5.69□□□□□ -1.5
SEC18YBR080C PUS2P53167 370 aa5.69□□□□□ -1.5
SEC18YBR080C ADE12P80210 433 aaKnown RBP5.69□□□□□ -1.5
SEC18YBR080C PDS5Q04264 1277 aa5.69□□□□□ -1.5
SEC18YBR080C LAG2Q92325 660 aa5.69□□□□□ -1.5
SEC18YBR080C COX3P00420 269 aa5.68□□□□□ -1.5
SEC18YBR080C RPP1AP05318 106 aaPredicted RBP5.68□□□□□ -1.5
SEC18YBR080C LEU4P06208 619 aaKnown RBP5.68□□□□□ -1.5
SEC18YBR080C GPA1P08539 472 aa5.68□□□□□ -1.5
SEC18YBR080C YHR045WP38775 560 aa5.68□□□□□ -1.5
SEC18YBR080C PET100P38958 111 aa5.68□□□□□ -1.5
SEC18YBR080C CDC40P40968 455 aaPredicted RBP5.68□□□□□ -1.5
SEC18YBR080C STB2P46679 850 aa5.68□□□□□ -1.5
SEC18YBR080C NMD5P46970 1048 aa5.68□□□□□ -1.5
SEC18YBR080C BUD9P53226 547 aa5.68□□□□□ -1.5
SEC18YBR080C YGR126WP53274 230 aa5.68□□□□□ -1.5
SEC18YBR080C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
SEC18YBR080C FIN1Q03898 291 aa5.68□□□□□ -1.5
SEC18YBR080C SLP1Q12232 587 aa5.68□□□□□ -1.5
SEC18YBR080C YOL107WQ12239 342 aa5.68□□□□□ -1.5
SEC18YBR080C ATG31Q12421 196 aa5.68□□□□□ -1.5
SEC18YBR080C RRP12Q12754 1228 aaKnown RBP5.68□□□□□ -1.5
SEC18YBR080C SRN2Q99176 213 aa5.68□□□□□ -1.5
SEC18YBR080C PDA1P16387 420 aaKnown RBP5.68□□□□□ -1.5
SEC18YBR080C CKA2P19454 339 aa5.68□□□□□ -1.5
SEC18YBR080C CLN1P20437 546 aa5.68□□□□□ -1.5
SEC18YBR080C NAR1P23503 491 aaKnown RBP5.68□□□□□ -1.5
SEC18YBR080C IMP3P32899 183 aaPredicted RBP5.68□□□□□ -1.5
SEC18YBR080C EFM2P38347 419 aa5.68□□□□□ -1.5
SEC18YBR080C YNG2P38806 282 aaKnown RBP5.68□□□□□ -1.5
SEC18YBR080C VHS2P40463 436 aa5.68□□□□□ -1.5
SEC18YBR080C MTR3P48240 250 aaPredicted RBP5.68□□□□□ -1.5
SEC18YBR080C PRM1P53835 661 aa5.68□□□□□ -1.5
SEC18YBR080C ESBP6P53918 673 aa5.68□□□□□ -1.5
SEC18YBR080C MTG1Q03151 367 aaPredicted RBP5.68□□□□□ -1.5
SEC18YBR080C URH1Q04179 340 aa5.68□□□□□ -1.5
SEC18YBR080C AI1P03875 834 aa5.67□□□□□ -1.5
SEC18YBR080C ABF1P14164 731 aa5.67□□□□□ -1.5
SEC18YBR080C KSS1P14681 368 aa5.67□□□□□ -1.5
SEC18YBR080C PRE10P21242 288 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
SEC18YBR080C RNR1P21524 888 aaKnown RBP5.67□□□□□ -1.5
SEC18YBR080C PEX1P24004 1043 aa5.67□□□□□ -1.5
SEC18YBR080C GID7P25569 745 aa5.67□□□□□ -1.5
SEC18YBR080C CDC15P27636 974 aa5.67□□□□□ -1.5
SEC18YBR080C MEI5P32489 222 aa5.67□□□□□ -1.5
SEC18YBR080C SMF2P38778 549 aa5.67□□□□□ -1.5
SEC18YBR080C YHR078WP38799 552 aa5.67□□□□□ -1.5
SEC18YBR080C SBE22P38814 852 aa5.67□□□□□ -1.5
SEC18YBR080C GET2P40056 285 aa5.67□□□□□ -1.5
SEC18YBR080C SDP1P40479 209 aa5.67□□□□□ -1.5
SEC18YBR080C COS5P47187 383 aa5.67□□□□□ -1.5
SEC18YBR080C RFX1P48743 811 aa5.67□□□□□ -1.5
SEC18YBR080C LSC2P53312 427 aa5.67□□□□□ -1.5
SEC18YBR080C HEF3P53978 1044 aaKnown RBP5.67□□□□□ -1.5
SEC18YBR080C SKO1Q02100 647 aa5.67□□□□□ -1.5
SEC18YBR080C RLI1Q03195 608 aaKnown RBP5.67□□□□□ -1.5
SEC18YBR080C USA1Q03714 838 aa5.67□□□□□ -1.5
SEC18YBR080C FUS2Q05670 677 aa5.67□□□□□ -1.5
SEC18YBR080C ATG23Q06671 453 aa5.67□□□□□ -1.5
SEC18YBR080C COS7Q07788 383 aa5.67□□□□□ -1.5
SEC18YBR080C SIL1Q08199 421 aa5.67□□□□□ -1.5
SEC18YBR080C CRT10Q08226 957 aa5.67□□□□□ -1.5
SEC18YBR080C RDR1Q08904 546 aa5.67□□□□□ -1.5
SEC18YBR080C YOR223WQ12015 292 aa5.67□□□□□ -1.5
SEC18YBR080C HRP1Q99383 534 aaKnown RBP5.67□□□□□ -1.5
SEC18YBR080C DCG1P32460 244 aa5.67□□□□□ -1.5
SEC18YBR080C SIP1P32578 815 aa5.67□□□□□ -1.5
SEC18YBR080C UGP1P32861 499 aaKnown RBP5.67□□□□□ -1.5
SEC18YBR080C URB2P47108 1174 aa5.67□□□□□ -1.5
SEC18YBR080C DIA3P52290 468 aa5.67□□□□□ -1.5
SEC18YBR080C TPP1Q03796 238 aa5.67□□□□□ -1.5
SEC18YBR080C YMR160WQ03823 816 aa5.67□□□□□ -1.5
SEC18YBR080C YMR074CQ04773 145 aa5.67□□□□□ -1.5
SEC18YBR080C YBR085C-AO43137 85 aa5.66□□□□□ -1.5
SEC18YBR080C POL30P15873 258 aaKnown RBP5.66□□□□□ -1.5
SEC18YBR080C PRP16P15938 1071 aaPredicted RBP5.66□□□□□ -1.5
SEC18YBR080C YPK2P18961 677 aa5.66□□□□□ -1.5
SEC18YBR080C PTR2P32901 601 aa5.66□□□□□ -1.5
SEC18YBR080C SWC5P38326 303 aa5.66□□□□□ -1.5
SEC18YBR080C YHR182WP38870 785 aa5.66□□□□□ -1.5
SEC18YBR080C RMR1P53060 241 aa5.66□□□□□ -1.5
SEC18YBR080C YIP5P53108 310 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms