RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 DGKHQ86XP1 1220 aa7.49□□□□□ -1.21
SCFD1-208ENST00000553278 GPR161Q8N6U8 529 aaKnown RBP7.49□□□□□ -1.21
SCFD1-208ENST00000553278 ZFYVE21Q9BQ24 234 aa7.49□□□□□ -1.21
SCFD1-208ENST00000553278 RHOBTB2Q9BYZ6 727 aa7.49□□□□□ -1.21
SCFD1-208ENST00000553278 PRDM14Q9GZV8 571 aa7.49□□□□□ -1.21
SCFD1-208ENST00000553278 ASXL2Q76L83 1435 aa7.49□□□□□ -1.21
SCFD1-208ENST00000553278 ZNF891A8MT65 544 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-208ENST00000553278 DLL1O00548 723 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 VAMP4O75379 141 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 PRKD3O94806 890 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 SNUPNO95149 360 aaKnown RBP7.48□□□□□ -1.21
SCFD1-208ENST00000553278 WISP1O95388 367 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 AMPD1P23109 780 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 ADCYAP1R1P41586 468 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 RAC1P63000 192 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 ATP13A4Q4VNC1 1196 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 KCNT2Q6UVM3 1135 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 RSPO2Q6UXX9 243 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-208ENST00000553278 C1orf229Q6ZS94 237 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-208ENST00000553278 CDH24Q86UP0 819 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 IFNL3Q8IZI9 196 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 NXPE1Q8N323 547 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 SMC1BQ8NDV3 1235 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 ACDQ96AP0 544 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 COL25A1Q9BXS0 654 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-208ENST00000553278 CABP5Q9NP86 173 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 GFOD1Q9NXC2 390 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 IP6K2Q9UHH9 426 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 RNF112Q9ULX5 631 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 LUC7L2Q9Y383 392 aaKnown RBP7.48□□□□□ -1.21
SCFD1-208ENST00000553278 ACTL7BQ9Y614 415 aa7.48□□□□□ -1.21
SCFD1-208ENST00000553278 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-208ENST00000553278 KRBA1A5PL33 1030 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 K7ESF4 209 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 ULK1O75385 1050 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 GLRX3O76003 335 aaKnown RBP7.47□□□□□ -1.21
SCFD1-208ENST00000553278 TIAF1O95411 115 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 KCNA6P17658 529 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 LSSP48449 732 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 GPR85P60893 370 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 POU4F1Q01851 419 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 DSG1Q02413 1049 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 SCRN1Q12765 414 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 DPY19L1Q2PZI1 675 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 ZC3H7AQ8IWR0 971 aaKnown RBP7.47□□□□□ -1.21
SCFD1-208ENST00000553278 PPIL6Q8IXY8 311 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 IGSF22Q8N9C0 903 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 SLC39A13Q96H72 371 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 GPR101Q96P66 508 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-208ENST00000553278 PHF20Q9BVI0 1012 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 FAM105AQ9NUU6 356 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 PCDHA8Q9Y5H6 950 aa7.47□□□□□ -1.21
SCFD1-208ENST00000553278 MYBL2P10244 700 aa7.46□□□□□ -1.22
SCFD1-208ENST00000553278 CYP7A1P22680 504 aa7.46□□□□□ -1.22
SCFD1-208ENST00000553278 TCIRG1Q13488 830 aa7.46□□□□□ -1.22
SCFD1-208ENST00000553278 ABCB5Q2M3G0 1257 aa7.46□□□□□ -1.22
SCFD1-208ENST00000553278 CWF19L1Q69YN2 538 aaKnown RBP7.46□□□□□ -1.22
SCFD1-208ENST00000553278 ANKRD34AQ69YU3 496 aa7.46□□□□□ -1.22
SCFD1-208ENST00000553278 ABHD17CQ6PCB6 329 aa7.46□□□□□ -1.22
SCFD1-208ENST00000553278 C2CD4AQ8NCU7 369 aaPredicted RBP7.46□□□□□ -1.22
SCFD1-208ENST00000553278 KREMEN2Q8NCW0 462 aa7.46□□□□□ -1.22
SCFD1-208ENST00000553278 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.46□□□□□ -1.22
SCFD1-208ENST00000553278 FBXO41Q8TF61 875 aa7.46□□□□□ -1.22
SCFD1-208ENST00000553278 FUBP3Q96I24 572 aaKnown RBP eCLIP7.46□□□□□ -1.22
SCFD1-208ENST00000553278 SLC13A1Q9BZW2 595 aa7.46□□□□□ -1.22
SCFD1-208ENST00000553278 PRDM11Q9NQV5 511 aa7.46□□□□□ -1.22
SCFD1-208ENST00000553278 NXF1Q9UBU9 619 aaKnown RBP7.46□□□□□ -1.22
SCFD1-208ENST00000553278 TTBK1Q5TCY1 1321 aaPredicted RBP7.46□□□□□ -1.22
SCFD1-208ENST00000553278 ARVCFO00192 962 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 MEFVO15553 781 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-208ENST00000553278 PRPF3O43395 683 aaKnown RBP7.45□□□□□ -1.22
SCFD1-208ENST00000553278 OIP5O43482 229 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 PURAQ00577 322 aaKnown RBP7.45□□□□□ -1.22
SCFD1-208ENST00000553278 SNW1Q13573 536 aaKnown RBP7.45□□□□□ -1.22
SCFD1-208ENST00000553278 COL9A3Q14050 684 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-208ENST00000553278 MINDY4Q4G0A6 757 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 C4orf46Q504U0 113 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 RNFT1Q5M7Z0 435 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 ACBD5Q5T8D3 534 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-208ENST00000553278 DENND5AQ6IQ26 1287 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 NPAS3Q8IXF0 933 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 FMR1NBQ8N0W7 255 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-208ENST00000553278 SVIPQ8NHG7 77 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 ALG1Q9BT22 464 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 MRPL18Q9H0U6 180 aaKnown RBP7.45□□□□□ -1.22
SCFD1-208ENST00000553278 ASCC2Q9H1I8 757 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-208ENST00000553278 TCF7L1Q9HCS4 588 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 CHST12Q9NRB3 414 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 GPR27Q9NS67 375 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 CHST7Q9NS84 486 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 OBP2AQ9NY56 170 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 ANKRD6Q9Y2G4 727 aa7.45□□□□□ -1.22
SCFD1-208ENST00000553278 VSTM5A8MXK1 200 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 SIGLEC6O43699 453 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 SLITRK5O94991 958 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 KPNA1P52294 538 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-208ENST00000553278 CYP4F3Q08477 520 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 PAK1Q13153 545 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 LCE2CQ5TA81 110 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 TMED8Q6PL24 325 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms