RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH1	YOR388C	YER130C	P39959	443 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	IMA1	P53051	589 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	MET14	Q02196	202 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	MTG1	Q03151	367 aa	Predicted RBP	4.08	□□□□□ -1.76
FDH1	YOR388C	YML037C	Q03703	340 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	MLC2	Q06580	163 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	ATG23	Q06671	453 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	MLH2	Q07980	695 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	MCH4	Q08268	501 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	ETT1	Q08421	412 aa	Known RBP	4.08	□□□□□ -1.76
FDH1	YOR388C	DSE3	Q08729	430 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	APL4	Q12028	832 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	YPL150W	Q12152	901 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	GAL1	P04385	528 aa		4.07	□□□□□ -1.76
FDH1	YOR388C	PET123	P17558	318 aa		4.07	□□□□□ -1.76
FDH1	YOR388C	YCR043C	P25361	127 aa		4.07	□□□□□ -1.76
FDH1	YOR388C	PAH1	P32567	862 aa		4.07	□□□□□ -1.76
FDH1	YOR388C	ANP1	P32629	500 aa		4.07	□□□□□ -1.76
FDH1	YOR388C	PSY4	P38193	441 aa		4.07	□□□□□ -1.76
FDH1	YOR388C	SKP2	P42843	763 aa		4.07	□□□□□ -1.76
FDH1	YOR388C	UBP8	P50102	471 aa		4.07	□□□□□ -1.76
FDH1	YOR388C	CPR6	P53691	371 aa	Known RBP	4.07	□□□□□ -1.76
FDH1	YOR388C	MOT3	P54785	490 aa	Known RBP	4.07	□□□□□ -1.76
FDH1	YOR388C	RRB1	Q04225	511 aa	Known RBP	4.07	□□□□□ -1.76
FDH1	YOR388C	SKG3	Q06315	1026 aa		4.07	□□□□□ -1.76
FDH1	YOR388C	YPL225W	Q08971	146 aa	Known RBP	4.07	□□□□□ -1.76
FDH1	YOR388C	GSC2	P40989	1895 aa		4.07	□□□□□ -1.76
FDH1	YOR388C	VPS13	Q07878	3144 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	MSS18	P08593	268 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	YFL068W	P0CX99	160 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	YLL066W-A	P0CY00	160 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	YLL067W-A	P0CY01	160 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	SAM1	P10659	382 aa	Known RBP	4.06	□□□□□ -1.76
FDH1	YOR388C	SWI4	P25302	1093 aa	Known RBP	4.06	□□□□□ -1.76
FDH1	YOR388C	ARP2	P32381	391 aa	Known RBP	4.06	□□□□□ -1.76
FDH1	YOR388C	UTR4	P32626	227 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	TOM20	P35180	183 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	SWH1	P35845	1188 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	MYO3	P36006	1272 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	ARC40	P38328	384 aa	Known RBP	4.06	□□□□□ -1.76
FDH1	YOR388C	HIS6	P40545	261 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	TES1	P41903	349 aa	Known RBP	4.06	□□□□□ -1.76
FDH1	YOR388C	CTK3	P46963	296 aa	Predicted RBP	4.06	□□□□□ -1.76
FDH1	YOR388C	TAM41	P53230	385 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	SOL4	P53315	255 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	SWF1	Q04629	336 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	SUE1	Q06524	206 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	TY3A-G	Q12173	290 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	TY3A-I	Q99219	290 aa		4.06	□□□□□ -1.76
FDH1	YOR388C	NUC1	P08466	329 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	YML003W	P0CF16	290 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	UBC1	P21734	215 aa	Known RBP	4.05	□□□□□ -1.76
FDH1	YOR388C	YCR006C	P25350	157 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	CDC15	P27636	974 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	SWI3	P32591	825 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	SHP1	P34223	423 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	PCH2	P38126	564 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	FSH1	P38777	243 aa	Known RBP	4.05	□□□□□ -1.76
FDH1	YOR388C	NDT80	P38830	627 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	VPS45	P38932	577 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	SPC72	P39723	622 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	YAT2	P40017	923 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	CSM2	P40465	213 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	SPO22	P40511	975 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	VPS25	P47142	202 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	YVH1	Q02256	364 aa	Known RBP	4.05	□□□□□ -1.76
FDH1	YOR388C	VPS72	Q03388	795 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	SLD5	Q03406	294 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	CAC2	Q04199	468 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	VMS1	Q04311	632 aa	Known RBP	4.05	□□□□□ -1.76
FDH1	YOR388C	YMR034C	Q05131	434 aa	Predicted RBP	4.05	□□□□□ -1.76
FDH1	YOR388C	POS5	Q06892	414 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	ATG9	Q12142	997 aa		4.05	□□□□□ -1.76
FDH1	YOR388C	MRP2	P10663	115 aa	Predicted RBP	4.04	□□□□□ -1.76
FDH1	YOR388C	TPM1	P17536	199 aa	Known RBP	4.04	□□□□□ -1.76
FDH1	YOR388C	RFA2	P26754	273 aa	Known RBP	4.04	□□□□□ -1.76
FDH1	YOR388C	DPB3	P27344	201 aa		4.04	□□□□□ -1.76
FDH1	YOR388C	PTP2	P29461	750 aa		4.04	□□□□□ -1.76
FDH1	YOR388C	RGT1	P32862	1170 aa		4.04	□□□□□ -1.76
FDH1	YOR388C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
FDH1	YOR388C	MAL33	P38157	468 aa		4.04	□□□□□ -1.76
FDH1	YOR388C	RFT1	P38206	574 aa	Predicted RBP	4.04	□□□□□ -1.76
FDH1	YOR388C	MET30	P39014	640 aa		4.04	□□□□□ -1.76
FDH1	YOR388C	PCL6	P40038	420 aa		4.04	□□□□□ -1.76
FDH1	YOR388C	SEC9	P40357	651 aa		4.04	□□□□□ -1.76
FDH1	YOR388C	ASG1	P40467	964 aa		4.04	□□□□□ -1.76
FDH1	YOR388C	APT1	P49435	187 aa	Known RBP	4.04	□□□□□ -1.76
FDH1	YOR388C	TAN1	P53072	289 aa	Predicted RBP	4.04	□□□□□ -1.76
FDH1	YOR388C	YGL039W	P53183	348 aa	Known RBP	4.04	□□□□□ -1.76
FDH1	YOR388C	RPT6	Q01939	405 aa	Known RBP	4.04	□□□□□ -1.76
FDH1	YOR388C	TMA64	Q04600	565 aa	Known RBP	4.04	□□□□□ -1.76
FDH1	YOR388C	NDD1	Q08887	554 aa		4.04	□□□□□ -1.76
FDH1	YOR388C	FRE3	Q08905	711 aa		4.04	□□□□□ -1.76
FDH1	YOR388C	SEC39	Q12745	709 aa		4.04	□□□□□ -1.76
FDH1	YOR388C	TUS1	Q06412	1307 aa		4.03	□□□□□ -1.76
FDH1	YOR388C	ATP4	P05626	244 aa		4.03	□□□□□ -1.76
FDH1	YOR388C	SUI3	P09064	285 aa	Known RBP	4.03	□□□□□ -1.76
FDH1	YOR388C	PHO13	P19881	312 aa		4.03	□□□□□ -1.76
FDH1	YOR388C	RPO26	P20435	155 aa		4.03	□□□□□ -1.76
FDH1	YOR388C	MAK31	P23059	88 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms