RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C DRE2P36152 348 aa4.41□□□□□ -1.7
CDC42YLR229C TSC10P38342 320 aa4.41□□□□□ -1.7
CDC42YLR229C TRM5P38793 499 aa4.41□□□□□ -1.7
CDC42YLR229C LYS9P38999 446 aa4.41□□□□□ -1.7
CDC42YLR229C STL1P39932 569 aa4.41□□□□□ -1.7
CDC42YLR229C PSF2P40359 213 aa4.41□□□□□ -1.7
CDC42YLR229C CCT7P42943 550 aaKnown RBP4.41□□□□□ -1.7
CDC42YLR229C YFL052WP43551 465 aa4.41□□□□□ -1.7
CDC42YLR229C CAF16P43569 289 aa4.41□□□□□ -1.7
CDC42YLR229C STB2P46679 850 aa4.41□□□□□ -1.7
CDC42YLR229C EMC2P47133 292 aaKnown RBP4.41□□□□□ -1.7
CDC42YLR229C AZR1P50080 613 aa4.41□□□□□ -1.7
CDC42YLR229C SPT20P50875 604 aa4.41□□□□□ -1.7
CDC42YLR229C ALT2P52892 507 aa4.41□□□□□ -1.7
CDC42YLR229C MRM2P53123 320 aa4.41□□□□□ -1.7
CDC42YLR229C YGR054WP53235 642 aaKnown RBP4.41□□□□□ -1.7
CDC42YLR229C SNP1Q00916 300 aaPredicted RBP4.41□□□□□ -1.7
CDC42YLR229C YDR476CQ03362 224 aa4.41□□□□□ -1.7
CDC42YLR229C CRR1Q05790 422 aa4.41□□□□□ -1.7
CDC42YLR229C TPO1Q07824 586 aa4.41□□□□□ -1.7
CDC42YLR229C THI20Q08224 551 aa4.41□□□□□ -1.7
CDC42YLR229C DNL4Q08387 944 aaPredicted RBP4.41□□□□□ -1.7
CDC42YLR229C THI21Q08975 551 aa4.41□□□□□ -1.7
CDC42YLR229C YOR022CQ12204 715 aa4.41□□□□□ -1.7
CDC42YLR229C YDL177CQ12257 170 aa4.41□□□□□ -1.7
CDC42YLR229C GPM3Q12326 303 aa4.41□□□□□ -1.7
CDC42YLR229C NOT5Q12514 560 aaPredicted RBP4.41□□□□□ -1.7
CDC42YLR229C IMA3P0CW40 589 aa4.4□□□□□ -1.71
CDC42YLR229C IMA4P0CW41 589 aa4.4□□□□□ -1.71
CDC42YLR229C KSS1P14681 368 aa4.4□□□□□ -1.71
CDC42YLR229C PRP6P19735 899 aaPredicted RBP4.4□□□□□ -1.71
CDC42YLR229C BUD23P25627 275 aaPredicted RBP4.4□□□□□ -1.71
CDC42YLR229C GAC1P28006 793 aa4.4□□□□□ -1.71
CDC42YLR229C URA7P28274 579 aaKnown RBP4.4□□□□□ -1.71
CDC42YLR229C DGR2P32330 852 aa4.4□□□□□ -1.71
CDC42YLR229C HOG1P32485 435 aa4.4□□□□□ -1.71
CDC42YLR229C RPD3P32561 433 aa4.4□□□□□ -1.71
CDC42YLR229C SMI1P32566 505 aa4.4□□□□□ -1.71
CDC42YLR229C RPS0AP32905 252 aaKnown RBP4.4□□□□□ -1.71
CDC42YLR229C LRG1P35688 1017 aa4.4□□□□□ -1.71
CDC42YLR229C APN2P38207 520 aa4.4□□□□□ -1.71
CDC42YLR229C SHE3P38272 425 aaKnown RBP4.4□□□□□ -1.71
CDC42YLR229C HSL7P38274 827 aa4.4□□□□□ -1.71
CDC42YLR229C YBR259WP38338 688 aa4.4□□□□□ -1.71
CDC42YLR229C DIA4P38705 446 aaPredicted RBP4.4□□□□□ -1.71
CDC42YLR229C YHL026CP38740 315 aa4.4□□□□□ -1.71
CDC42YLR229C SMF2P38778 549 aa4.4□□□□□ -1.71
CDC42YLR229C CKB2P38930 258 aa4.4□□□□□ -1.71
CDC42YLR229C MEF2P39677 819 aa4.4□□□□□ -1.71
CDC42YLR229C AVT2P39981 480 aa4.4□□□□□ -1.71
CDC42YLR229C SCC4P40090 624 aa4.4□□□□□ -1.71
CDC42YLR229C MAM33P40513 266 aa4.4□□□□□ -1.71
CDC42YLR229C SNL1P40548 159 aa4.4□□□□□ -1.71
CDC42YLR229C SWP82P43554 623 aa4.4□□□□□ -1.71
CDC42YLR229C FAR3P46671 204 aa4.4□□□□□ -1.71
CDC42YLR229C GLG2P47011 380 aa4.4□□□□□ -1.71
CDC42YLR229C TRF5P48561 642 aaKnown RBP4.4□□□□□ -1.71
CDC42YLR229C GCV2P49095 1034 aa4.4□□□□□ -1.71
CDC42YLR229C STB4P50104 949 aa4.4□□□□□ -1.71
CDC42YLR229C PAN2P53010 1115 aaPredicted RBP4.4□□□□□ -1.71
CDC42YLR229C TEL2P53038 688 aa4.4□□□□□ -1.71
CDC42YLR229C UBX4P54730 416 aa4.4□□□□□ -1.71
CDC42YLR229C NHX1Q04121 633 aa4.4□□□□□ -1.71
CDC42YLR229C ADE13Q05911 482 aaKnown RBP4.4□□□□□ -1.71
CDC42YLR229C IMA2Q08295 589 aa4.4□□□□□ -1.71
CDC42YLR229C APC5Q08683 685 aa4.4□□□□□ -1.71
CDC42YLR229C YLL056CQ12177 298 aa4.4□□□□□ -1.71
CDC42YLR229C GLE1Q12315 538 aa4.4□□□□□ -1.71
CDC42YLR229C SCM3Q12334 223 aa4.4□□□□□ -1.71
CDC42YLR229C IZH4Q99393 312 aa4.4□□□□□ -1.71
CDC42YLR229C ECM29P38737 1868 aa4.4□□□□□ -1.71
CDC42YLR229C MOT1P32333 1867 aa4.39□□□□□ -1.71
CDC42YLR229C YPR089WO13585 888 aa4.39□□□□□ -1.71
CDC42YLR229C RPS13P05756 151 aaKnown RBP4.39□□□□□ -1.71
CDC42YLR229C TPK1P06244 397 aa4.39□□□□□ -1.71
CDC42YLR229C PET122P10355 254 aa4.39□□□□□ -1.71
CDC42YLR229C GPA2P10823 449 aa4.39□□□□□ -1.71
CDC42YLR229C FAR1P21268 830 aa4.39□□□□□ -1.71
CDC42YLR229C GFD2P25370 566 aaKnown RBP4.39□□□□□ -1.71
CDC42YLR229C BRF1P29056 596 aa4.39□□□□□ -1.71
CDC42YLR229C ATP7P30902 174 aa4.39□□□□□ -1.71
CDC42YLR229C NGG1P32494 702 aa4.39□□□□□ -1.71
CDC42YLR229C SPR1P32603 445 aa4.39□□□□□ -1.71
CDC42YLR229C RPT5P33297 434 aaKnown RBP4.39□□□□□ -1.71
CDC42YLR229C YBP1P38315 674 aa4.39□□□□□ -1.71
CDC42YLR229C UTP9P38882 575 aaKnown RBP4.39□□□□□ -1.71
CDC42YLR229C AFG3P39925 761 aa4.39□□□□□ -1.71
CDC42YLR229C SSP120P39931 234 aaKnown RBP4.39□□□□□ -1.71
CDC42YLR229C SYG1P40528 902 aa4.39□□□□□ -1.71
CDC42YLR229C MET12P46151 657 aa4.39□□□□□ -1.71
CDC42YLR229C POL31P46957 487 aa4.39□□□□□ -1.71
CDC42YLR229C TAH11P47112 604 aa4.39□□□□□ -1.71
CDC42YLR229C RFX1P48743 811 aa4.39□□□□□ -1.71
CDC42YLR229C NPY1P53164 384 aa4.39□□□□□ -1.71
CDC42YLR229C PEX31P53203 462 aa4.39□□□□□ -1.71
CDC42YLR229C ORM1P53224 222 aa4.39□□□□□ -1.71
CDC42YLR229C SLG1P54867 378 aa4.39□□□□□ -1.71
CDC42YLR229C SLT2Q00772 484 aa4.39□□□□□ -1.71
CDC42YLR229C STP1Q00947 519 aa4.39□□□□□ -1.71
CDC42YLR229C OSH6Q02201 448 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms